RNA–Protein interactions for RNA: ENST00000482578.2

TRIM2-207, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 773 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-207ENST00000482578 NISCHQ9Y2I1 1504 aa21.43■■□□□ 1.02
TRIM2-207ENST00000482578 ABCC9O60706 1549 aa19.29■□□□□ 0.68
TRIM2-207ENST00000482578 CCDC180Q9P1Z9 1646 aa19.21■□□□□ 0.67
TRIM2-207ENST00000482578 RB1CC1Q8TDY2 1594 aa18.35■□□□□ 0.53
TRIM2-207ENST00000482578 DCAF8L2P0C7V8 631 aa18.23■□□□□ 0.51
TRIM2-207ENST00000482578 NACADO15069 1562 aa18.21■□□□□ 0.51
TRIM2-207ENST00000482578 DNAJC5BQ9UF47 199 aa18.05■□□□□ 0.48
TRIM2-207ENST00000482578 PABPN1Q86U42 306 aaKnown RBP eCLIP17.97■□□□□ 0.47
TRIM2-207ENST00000482578 MYO15BQ96JP2 1530 aa17.93■□□□□ 0.46
TRIM2-207ENST00000482578 UNC13AQ9UPW8 1703 aa17.78■□□□□ 0.44
TRIM2-207ENST00000482578 ZCCHC6Q5VYS8 1495 aaKnown RBP17.75■□□□□ 0.43
TRIM2-207ENST00000482578 BICRAQ9NZM4 1560 aa17.72■□□□□ 0.43
TRIM2-207ENST00000482578 DCAF1Q9Y4B6 1507 aa17.69■□□□□ 0.42
TRIM2-207ENST00000482578 SHROOM4Q9ULL8 1493 aa17.59■□□□□ 0.41
TRIM2-207ENST00000482578 SCRIBQ14160 1630 aa17.54■□□□□ 0.4
TRIM2-207ENST00000482578 CECR2Q9BXF3 1484 aa17.39■□□□□ 0.37
TRIM2-207ENST00000482578 CC2D2AQ9P2K1 1620 aa17.37■□□□□ 0.37
TRIM2-207ENST00000482578 EIF4G1Q04637 1599 aaKnown RBP17.35■□□□□ 0.37
TRIM2-207ENST00000482578 CHIC1Q5VXU3 224 aa16.86■□□□□ 0.29
TRIM2-207ENST00000482578 AEBP2Q6ZN18 517 aaPredicted RBP16.83■□□□□ 0.28
TRIM2-207ENST00000482578 NCAPD3P42695 1498 aa16.8■□□□□ 0.28
TRIM2-207ENST00000482578 ATAD2BQ9ULI0 1458 aa16.75■□□□□ 0.27
TRIM2-207ENST00000482578 SMARCA2P51531 1590 aa16.73■□□□□ 0.27
TRIM2-207ENST00000482578 ERCC6Q03468 1493 aa16.72■□□□□ 0.27
TRIM2-207ENST00000482578 SMARCA4P51532 1647 aa16.7■□□□□ 0.26
TRIM2-207ENST00000482578 HMGXB3Q12766 1538 aa16.67■□□□□ 0.26
TRIM2-207ENST00000482578 BAZ1AQ9NRL2 1556 aaPredicted RBP16.67■□□□□ 0.26
TRIM2-207ENST00000482578 DNAJC5Q9H3Z4 198 aa16.66■□□□□ 0.26
TRIM2-207ENST00000482578 CUX2O14529 1486 aa16.65■□□□□ 0.26
TRIM2-207ENST00000482578 BAZ1BQ9UIG0 1483 aaKnown RBP16.63■□□□□ 0.25
TRIM2-207ENST00000482578 NESP48681 1621 aa16.52■□□□□ 0.24
TRIM2-207ENST00000482578 PEG3Q9GZU2 1588 aa16.52■□□□□ 0.24
TRIM2-207ENST00000482578 MROH2BQ7Z745 1585 aa16.49■□□□□ 0.23
TRIM2-207ENST00000482578 LAMC3Q9Y6N6 1575 aa16.43■□□□□ 0.22
TRIM2-207ENST00000482578 PDS5BQ9NTI5 1447 aa16.4■□□□□ 0.22
TRIM2-207ENST00000482578 CADPSQ9ULU8 1353 aa16.33■□□□□ 0.2
TRIM2-207ENST00000482578 THOC2Q8NI27 1593 aaKnown RBP16.33■□□□□ 0.2
TRIM2-207ENST00000482578 WIZO95785 1651 aa16.27■□□□□ 0.2
TRIM2-207ENST00000482578 KIF21AQ7Z4S6 1674 aa16.27■□□□□ 0.19
TRIM2-207ENST00000482578 MRC2Q9UBG0 1479 aa16.22■□□□□ 0.19
TRIM2-207ENST00000482578 CEP164Q9UPV0 1460 aa16.17■□□□□ 0.18
TRIM2-207ENST00000482578 RSF1Q96T23 1441 aaPredicted RBP16.17■□□□□ 0.18
TRIM2-207ENST00000482578 WDR62O43379 1518 aa16.14■□□□□ 0.18
TRIM2-207ENST00000482578 FANCD2Q9BXW9 1451 aa16.14■□□□□ 0.17
TRIM2-207ENST00000482578 TOP2AP11388 1531 aaKnown RBP16.12■□□□□ 0.17
TRIM2-207ENST00000482578 CFTRP13569 1480 aa16.1■□□□□ 0.17
TRIM2-207ENST00000482578 TRIM41Q8WV44 630 aa15.98■□□□□ 0.15
TRIM2-207ENST00000482578 URB2Q14146 1524 aaKnown RBP15.96■□□□□ 0.15
TRIM2-207ENST00000482578 CCDC88BA6NC98 1476 aa15.93■□□□□ 0.14
TRIM2-207ENST00000482578 OSCARQ8IYS5 282 aa15.93■□□□□ 0.14
TRIM2-207ENST00000482578 PRDM2Q13029 1718 aa15.86■□□□□ 0.13
TRIM2-207ENST00000482578 IFT140Q96RY7 1462 aa15.85■□□□□ 0.13
TRIM2-207ENST00000482578 ABCC8Q09428 1581 aa15.83■□□□□ 0.12
TRIM2-207ENST00000482578 TOPBP1Q92547 1522 aa15.8■□□□□ 0.12
TRIM2-207ENST00000482578 ZNF608Q9ULD9 1512 aaPredicted RBP15.77■□□□□ 0.11
TRIM2-207ENST00000482578 DNMBPQ6XZF7 1577 aa15.75■□□□□ 0.11
TRIM2-207ENST00000482578 EIF4G3O43432 1585 aaKnown RBP15.68■□□□□ 0.1
TRIM2-207ENST00000482578 AQRO60306 1485 aaKnown RBP eCLIP15.65■□□□□ 0.1
TRIM2-207ENST00000482578 FBLN2P98095 1184 aa15.65■□□□□ 0.1
TRIM2-207ENST00000482578 POLA1P09884 1462 aaPredicted RBP15.64■□□□□ 0.09
TRIM2-207ENST00000482578 RIMBP3CA6NJZ7 1639 aa15.63■□□□□ 0.09
TRIM2-207ENST00000482578 RIMBP3BA6NNM3 1639 aa15.63■□□□□ 0.09
TRIM2-207ENST00000482578 RIMBP3Q9UFD9 1639 aa15.63■□□□□ 0.09
TRIM2-207ENST00000482578 TARBP1Q13395 1621 aaKnown RBP15.61■□□□□ 0.09
TRIM2-207ENST00000482578 SOGA1O94964 1423 aa15.61■□□□□ 0.09
TRIM2-207ENST00000482578 ARHGEF11O15085 1522 aa15.6■□□□□ 0.09
TRIM2-207ENST00000482578 RAD54L2Q9Y4B4 1467 aa15.59■□□□□ 0.09
TRIM2-207ENST00000482578 TDRD9Q8NDG6 1382 aaKnown RBP15.58■□□□□ 0.08
TRIM2-207ENST00000482578 FGD5Q6ZNL6 1462 aa15.55■□□□□ 0.08
TRIM2-207ENST00000482578 CYB5RLQ6IPT4 315 aa15.55■□□□□ 0.08
TRIM2-207ENST00000482578 SUPT5HO00267 1087 aaKnown RBP15.53■□□□□ 0.08
TRIM2-207ENST00000482578 CHD1O14646 1710 aa15.53■□□□□ 0.08
TRIM2-207ENST00000482578 CHMP7Q8WUX9 453 aaPredicted RBP15.52■□□□□ 0.08
TRIM2-207ENST00000482578 WDR97A6NE52 1622 aa15.51■□□□□ 0.07
TRIM2-207ENST00000482578 SNAPC4Q5SXM2 1469 aa15.51■□□□□ 0.07
TRIM2-207ENST00000482578 CUX1P39880 1505 aa15.5■□□□□ 0.07
TRIM2-207ENST00000482578 GRIN2BQ13224 1484 aa15.48■□□□□ 0.07
TRIM2-207ENST00000482578 MAGI1Q96QZ7 1491 aaPredicted RBP15.47■□□□□ 0.07
TRIM2-207ENST00000482578 ARAP1Q96P48 1450 aa15.45■□□□□ 0.06
TRIM2-207ENST00000482578 TRHP20396 242 aaPredicted RBP15.44■□□□□ 0.06
TRIM2-207ENST00000482578 SYNJ1O43426 1573 aa15.43■□□□□ 0.06
TRIM2-207ENST00000482578 SYNJ2O15056 1496 aa15.42■□□□□ 0.06
TRIM2-207ENST00000482578 GAPVD1Q14C86 1478 aa15.4■□□□□ 0.06
TRIM2-207ENST00000482578 CLASP1Q7Z460 1538 aa15.38■□□□□ 0.05
TRIM2-207ENST00000482578 ABCA10Q8WWZ4 1543 aa15.38■□□□□ 0.05
TRIM2-207ENST00000482578 WRNQ14191 1432 aaPredicted RBP eCLIP15.35■□□□□ 0.05
TRIM2-207ENST00000482578 PBRM1Q86U86 1689 aa15.33■□□□□ 0.04
TRIM2-207ENST00000482578 ABCA5Q8WWZ7 1642 aa15.3■□□□□ 0.04
TRIM2-207ENST00000482578 GRIN2AQ12879 1464 aa15.26■□□□□ 0.03
TRIM2-207ENST00000482578 TOP2BQ02880 1626 aa15.25■□□□□ 0.03
TRIM2-207ENST00000482578 BIVM-ERCC5R4GMW8 1640 aa15.23■□□□□ 0.03
TRIM2-207ENST00000482578 FHAD1B1AJZ9 1412 aa15.23■□□□□ 0.03
TRIM2-207ENST00000482578 ADAMTS12P58397 1594 aa15.22■□□□□ 0.03
TRIM2-207ENST00000482578 NUP160Q12769 1436 aa15.19■□□□□ 0.02
TRIM2-207ENST00000482578 ERICH3Q5RHP9 1530 aa15.18■□□□□ 0.02
TRIM2-207ENST00000482578 CEP170Q5SW79 1584 aa15.15■□□□□ 0.02
TRIM2-207ENST00000482578 ERCC6L2Q5T890 1561 aa15.11■□□□□ 0.01
TRIM2-207ENST00000482578 JPH4Q96JJ6 628 aa15.09■□□□□ 0.01
TRIM2-207ENST00000482578 PRG4Q92954 1404 aaPredicted RBP15.09■□□□□ 0.01
TRIM2-207ENST00000482578 SHROOM2Q13796 1616 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms