RNA–Protein interactions for RNA: ENST00000482446.5

RNFT1-204, Transcript of ring finger protein, transmembrane 1, humanhuman

TSL 1 (best)

Gene RNFT1, Length 1,893 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1-204ENST00000482446 NISCHQ9Y2I1 1504 aa35.31■■■■□ 3.24
RNFT1-204ENST00000482446 CCDC180Q9P1Z9 1646 aa30.7■■■□□ 2.51
RNFT1-204ENST00000482446 ZCCHC6Q5VYS8 1495 aaKnown RBP29.74■■■□□ 2.35
RNFT1-204ENST00000482446 DCAF1Q9Y4B6 1507 aa29.22■■■□□ 2.27
RNFT1-204ENST00000482446 DCAF8L2P0C7V8 631 aa28.95■■■□□ 2.23
RNFT1-204ENST00000482446 SHROOM4Q9ULL8 1493 aa28.93■■■□□ 2.22
RNFT1-204ENST00000482446 MYO15BQ96JP2 1530 aa28.77■■■□□ 2.2
RNFT1-204ENST00000482446 ABCC9O60706 1549 aa28.73■■■□□ 2.19
RNFT1-204ENST00000482446 NACADO15069 1562 aa28.5■■■□□ 2.15
RNFT1-204ENST00000482446 SCRIBQ14160 1630 aa28.25■■■□□ 2.11
RNFT1-204ENST00000482446 RB1CC1Q8TDY2 1594 aa28.2■■■□□ 2.1
RNFT1-204ENST00000482446 SUPT5HO00267 1087 aaKnown RBP27.94■■■□□ 2.06
RNFT1-204ENST00000482446 UNC13AQ9UPW8 1703 aa27.66■■■□□ 2.02
RNFT1-204ENST00000482446 RSF1Q96T23 1441 aaPredicted RBP27.48■■□□□ 1.99
RNFT1-204ENST00000482446 CECR2Q9BXF3 1484 aa27.4■■□□□ 1.98
RNFT1-204ENST00000482446 BICRAQ9NZM4 1560 aa27.35■■□□□ 1.97
RNFT1-204ENST00000482446 MROH2BQ7Z745 1585 aa27.28■■□□□ 1.96
RNFT1-204ENST00000482446 BAZ1AQ9NRL2 1556 aaPredicted RBP27.25■■□□□ 1.95
RNFT1-204ENST00000482446 SMARCA4P51532 1647 aa27.1■■□□□ 1.93
RNFT1-204ENST00000482446 PABPN1Q86U42 306 aaKnown RBP eCLIP27.1■■□□□ 1.93
RNFT1-204ENST00000482446 WIZO95785 1651 aa27.08■■□□□ 1.93
RNFT1-204ENST00000482446 CHIC1Q5VXU3 224 aa26.91■■□□□ 1.9
RNFT1-204ENST00000482446 TOP2AP11388 1531 aaKnown RBP26.82■■□□□ 1.88
RNFT1-204ENST00000482446 PEG3Q9GZU2 1588 aa26.78■■□□□ 1.88
RNFT1-204ENST00000482446 SMARCA2P51531 1590 aa26.58■■□□□ 1.85
RNFT1-204ENST00000482446 ATAD2BQ9ULI0 1458 aa26.57■■□□□ 1.84
RNFT1-204ENST00000482446 EIF4G1Q04637 1599 aaKnown RBP26.52■■□□□ 1.84
RNFT1-204ENST00000482446 CCDC88BA6NC98 1476 aa26.52■■□□□ 1.84
RNFT1-204ENST00000482446 BAZ1BQ9UIG0 1483 aaKnown RBP26.44■■□□□ 1.82
RNFT1-204ENST00000482446 HMGXB3Q12766 1538 aa26.32■■□□□ 1.8
RNFT1-204ENST00000482446 NCAPD3P42695 1498 aa26.29■■□□□ 1.8
RNFT1-204ENST00000482446 TRIM41Q8WV44 630 aa26.26■■□□□ 1.79
RNFT1-204ENST00000482446 ABCC8Q09428 1581 aa26.07■■□□□ 1.76
RNFT1-204ENST00000482446 CC2D2AQ9P2K1 1620 aa26.04■■□□□ 1.76
RNFT1-204ENST00000482446 WRNQ14191 1432 aaPredicted RBP eCLIP25.86■■□□□ 1.73
RNFT1-204ENST00000482446 LOC105371045A0A1W2PR82 267 aa25.85■■□□□ 1.73
RNFT1-204ENST00000482446 CFTRP13569 1480 aa25.79■■□□□ 1.72
RNFT1-204ENST00000482446 SYNJ1O43426 1573 aa25.77■■□□□ 1.72
RNFT1-204ENST00000482446 FAM9AQ8IZU1 332 aaPredicted RBP25.77■■□□□ 1.72
RNFT1-204ENST00000482446 PRDM2Q13029 1718 aa25.72■■□□□ 1.71
RNFT1-204ENST00000482446 TOP2BQ02880 1626 aa25.65■■□□□ 1.7
RNFT1-204ENST00000482446 EEA1Q15075 1411 aa25.64■■□□□ 1.69
RNFT1-204ENST00000482446 BIVM-ERCC5R4GMW8 1640 aa25.63■■□□□ 1.69
RNFT1-204ENST00000482446 CADPSQ9ULU8 1353 aa25.62■■□□□ 1.69
RNFT1-204ENST00000482446 SOGA1O94964 1423 aa25.61■■□□□ 1.69
RNFT1-204ENST00000482446 CUX1P39880 1505 aa25.5■■□□□ 1.67
RNFT1-204ENST00000482446 RUSC2Q8N2Y8 1516 aa25.49■■□□□ 1.67
RNFT1-204ENST00000482446 CSRNP3Q8WYN3 585 aa25.41■■□□□ 1.66
RNFT1-204ENST00000482446 DNAJC5BQ9UF47 199 aa25.4■■□□□ 1.66
RNFT1-204ENST00000482446 EHMT2Q96KQ7 1210 aa25.38■■□□□ 1.65
RNFT1-204ENST00000482446 LAMC3Q9Y6N6 1575 aa25.38■■□□□ 1.65
RNFT1-204ENST00000482446 FANCD2Q9BXW9 1451 aa25.36■■□□□ 1.65
RNFT1-204ENST00000482446 KIF21BO75037 1637 aa25.32■■□□□ 1.64
RNFT1-204ENST00000482446 NESP48681 1621 aa25.32■■□□□ 1.64
RNFT1-204ENST00000482446 GOLGA3Q08378 1498 aa25.3■■□□□ 1.64
RNFT1-204ENST00000482446 CEP164Q9UPV0 1460 aa25.28■■□□□ 1.64
RNFT1-204ENST00000482446 TNIKQ9UKE5 1360 aa25.25■■□□□ 1.63
RNFT1-204ENST00000482446 DNMBPQ6XZF7 1577 aa25.2■■□□□ 1.62
RNFT1-204ENST00000482446 KIF27Q86VH2 1401 aa25.18■■□□□ 1.62
RNFT1-204ENST00000482446 FGD5Q6ZNL6 1462 aa25.18■■□□□ 1.62
RNFT1-204ENST00000482446 CEP162Q5TB80 1403 aa25.15■■□□□ 1.62
RNFT1-204ENST00000482446 PDS5BQ9NTI5 1447 aa25.14■■□□□ 1.62
RNFT1-204ENST00000482446 TOPBP1Q92547 1522 aa25.12■■□□□ 1.61
RNFT1-204ENST00000482446 ERICH3Q5RHP9 1530 aa25.1■■□□□ 1.61
RNFT1-204ENST00000482446 PRXQ9BXM0 1461 aa25.09■■□□□ 1.61
RNFT1-204ENST00000482446 RAPGEF2Q9Y4G8 1499 aa25.09■■□□□ 1.61
RNFT1-204ENST00000482446 UBTFP17480 764 aaKnown RBP25.09■■□□□ 1.61
RNFT1-204ENST00000482446 KIF21AQ7Z4S6 1674 aa25.05■■□□□ 1.6
RNFT1-204ENST00000482446 CUX2O14529 1486 aa25.05■■□□□ 1.6
RNFT1-204ENST00000482446 URB2Q14146 1524 aaKnown RBP25.03■■□□□ 1.6
RNFT1-204ENST00000482446 POLA1P09884 1462 aaPredicted RBP25.03■■□□□ 1.6
RNFT1-204ENST00000482446 ABCA10Q8WWZ4 1543 aa24.97■■□□□ 1.59
RNFT1-204ENST00000482446 PCGF6Q9BYE7 350 aa24.96■■□□□ 1.59
RNFT1-204ENST00000482446 RAD54L2Q9Y4B4 1467 aa24.92■■□□□ 1.58
RNFT1-204ENST00000482446 TRIM26Q12899 539 aaPredicted RBP24.91■■□□□ 1.58
RNFT1-204ENST00000482446 WDR97A6NE52 1622 aa24.91■■□□□ 1.58
RNFT1-204ENST00000482446 IGF1RP08069 1367 aa24.9■■□□□ 1.58
RNFT1-204ENST00000482446 CLIP1P30622 1438 aa24.88■■□□□ 1.57
RNFT1-204ENST00000482446 MRC2Q9UBG0 1479 aa24.82■■□□□ 1.56
RNFT1-204ENST00000482446 CARMIL1Q5VZK9 1371 aa24.78■■□□□ 1.56
RNFT1-204ENST00000482446 ABCA5Q8WWZ7 1642 aa24.77■■□□□ 1.56
RNFT1-204ENST00000482446 CUL7Q14999 1698 aa24.75■■□□□ 1.55
RNFT1-204ENST00000482446 TARBP1Q13395 1621 aaKnown RBP24.74■■□□□ 1.55
RNFT1-204ENST00000482446 VPS8Q8N3P4 1428 aa24.73■■□□□ 1.55
RNFT1-204ENST00000482446 WDR62O43379 1518 aa24.71■■□□□ 1.55
RNFT1-204ENST00000482446 GAPVD1Q14C86 1478 aa24.66■■□□□ 1.54
RNFT1-204ENST00000482446 TDRD9Q8NDG6 1382 aaKnown RBP24.64■■□□□ 1.53
RNFT1-204ENST00000482446 ARAP1Q96P48 1450 aa24.63■■□□□ 1.53
RNFT1-204ENST00000482446 ERCC6Q03468 1493 aa24.61■■□□□ 1.53
RNFT1-204ENST00000482446 PPARGC1BQ86YN6 1023 aaKnown RBP24.61■■□□□ 1.53
RNFT1-204ENST00000482446 RANGAP1P46060 587 aaPredicted RBP24.59■■□□□ 1.53
RNFT1-204ENST00000482446 THOC2Q8NI27 1593 aaKnown RBP24.58■■□□□ 1.53
RNFT1-204ENST00000482446 ARHGAP35Q9NRY4 1499 aa24.58■■□□□ 1.52
RNFT1-204ENST00000482446 IFT140Q96RY7 1462 aa24.55■■□□□ 1.52
RNFT1-204ENST00000482446 PBRM1Q86U86 1689 aa24.54■■□□□ 1.52
RNFT1-204ENST00000482446 CTTNBP2Q8WZ74 1663 aa24.52■■□□□ 1.52
RNFT1-204ENST00000482446 HRCP23327 699 aa24.49■■□□□ 1.51
RNFT1-204ENST00000482446 AQRO60306 1485 aaKnown RBP eCLIP24.44■■□□□ 1.5
RNFT1-204ENST00000482446 ADAMTS12P58397 1594 aa24.43■■□□□ 1.5
RNFT1-204ENST00000482446 GRIN2BQ13224 1484 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms