RNA–Protein interactions for RNA: ENST00000482434.1

VEPH1-211, Transcript of ventricular zone expressed PH domain containing 1, humanhuman

TSL 2

Gene VEPH1, Length 779 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEPH1-211ENST00000482434 NISCHQ9Y2I1 1504 aa24.44■■□□□ 1.5
VEPH1-211ENST00000482434 AEBP2Q6ZN18 517 aaPredicted RBP23■■□□□ 1.27
VEPH1-211ENST00000482434 ABCC9O60706 1549 aa21.8■■□□□ 1.08
VEPH1-211ENST00000482434 CCDC180Q9P1Z9 1646 aa21.75■■□□□ 1.07
VEPH1-211ENST00000482434 CHIC1Q5VXU3 224 aa21.72■■□□□ 1.07
VEPH1-211ENST00000482434 RB1CC1Q8TDY2 1594 aa20.68■□□□□ 0.9
VEPH1-211ENST00000482434 DCAF8L2P0C7V8 631 aa20.65■□□□□ 0.9
VEPH1-211ENST00000482434 NACADO15069 1562 aa20.59■□□□□ 0.89
VEPH1-211ENST00000482434 DNAJC5BQ9UF47 199 aa20.44■□□□□ 0.86
VEPH1-211ENST00000482434 PABPN1Q86U42 306 aaKnown RBP eCLIP20.38■□□□□ 0.85
VEPH1-211ENST00000482434 MYO15BQ96JP2 1530 aa20.33■□□□□ 0.85
VEPH1-211ENST00000482434 ZCCHC6Q5VYS8 1495 aaKnown RBP20.28■□□□□ 0.84
VEPH1-211ENST00000482434 UNC13AQ9UPW8 1703 aa20.18■□□□□ 0.82
VEPH1-211ENST00000482434 BICRAQ9NZM4 1560 aa20.17■□□□□ 0.82
VEPH1-211ENST00000482434 DCAF1Q9Y4B6 1507 aa20.13■□□□□ 0.81
VEPH1-211ENST00000482434 SCRIBQ14160 1630 aa19.94■□□□□ 0.78
VEPH1-211ENST00000482434 SENP3Q9H4L4 574 aaPredicted RBP19.83■□□□□ 0.77
VEPH1-211ENST00000482434 SHROOM4Q9ULL8 1493 aa19.79■□□□□ 0.76
VEPH1-211ENST00000482434 CC2D2AQ9P2K1 1620 aa19.63■□□□□ 0.73
VEPH1-211ENST00000482434 EIF4G1Q04637 1599 aaKnown RBP19.62■□□□□ 0.73
VEPH1-211ENST00000482434 CECR2Q9BXF3 1484 aa19.6■□□□□ 0.73
VEPH1-211ENST00000482434 PHF23Q9BUL5 403 aaPredicted RBP19.5■□□□□ 0.71
VEPH1-211ENST00000482434 NCAPD3P42695 1498 aa19.07■□□□□ 0.64
VEPH1-211ENST00000482434 ATAD2BQ9ULI0 1458 aa19.04■□□□□ 0.64
VEPH1-211ENST00000482434 SMARCA4P51532 1647 aa19.01■□□□□ 0.63
VEPH1-211ENST00000482434 SMARCA2P51531 1590 aa18.92■□□□□ 0.62
VEPH1-211ENST00000482434 BAZ1AQ9NRL2 1556 aaPredicted RBP18.91■□□□□ 0.62
VEPH1-211ENST00000482434 HMGXB3Q12766 1538 aa18.89■□□□□ 0.61
VEPH1-211ENST00000482434 MROH2BQ7Z745 1585 aa18.88■□□□□ 0.61
VEPH1-211ENST00000482434 BAZ1BQ9UIG0 1483 aaKnown RBP18.84■□□□□ 0.61
VEPH1-211ENST00000482434 PEG3Q9GZU2 1588 aa18.81■□□□□ 0.6
VEPH1-211ENST00000482434 NESP48681 1621 aa18.78■□□□□ 0.6
VEPH1-211ENST00000482434 ERCC6Q03468 1493 aa18.75■□□□□ 0.59
VEPH1-211ENST00000482434 CUX2O14529 1486 aa18.65■□□□□ 0.58
VEPH1-211ENST00000482434 WIZO95785 1651 aa18.6■□□□□ 0.57
VEPH1-211ENST00000482434 DNAJC5Q9H3Z4 198 aa18.58■□□□□ 0.56
VEPH1-211ENST00000482434 RSF1Q96T23 1441 aaPredicted RBP18.55■□□□□ 0.56
VEPH1-211ENST00000482434 LAMC3Q9Y6N6 1575 aa18.54■□□□□ 0.56
VEPH1-211ENST00000482434 CADPSQ9ULU8 1353 aa18.51■□□□□ 0.55
VEPH1-211ENST00000482434 PDS5BQ9NTI5 1447 aa18.48■□□□□ 0.55
VEPH1-211ENST00000482434 THOC2Q8NI27 1593 aaKnown RBP18.47■□□□□ 0.55
VEPH1-211ENST00000482434 FOXD1Q16676 465 aa18.43■□□□□ 0.54
VEPH1-211ENST00000482434 KIF21AQ7Z4S6 1674 aa18.42■□□□□ 0.54
VEPH1-211ENST00000482434 TOP2AP11388 1531 aaKnown RBP18.36■□□□□ 0.53
VEPH1-211ENST00000482434 CFTRP13569 1480 aa18.32■□□□□ 0.52
VEPH1-211ENST00000482434 MRC2Q9UBG0 1479 aa18.32■□□□□ 0.52
VEPH1-211ENST00000482434 FANCD2Q9BXW9 1451 aa18.28■□□□□ 0.52
VEPH1-211ENST00000482434 CEP164Q9UPV0 1460 aa18.26■□□□□ 0.51
VEPH1-211ENST00000482434 WDR62O43379 1518 aa18.26■□□□□ 0.51
VEPH1-211ENST00000482434 CCDC88BA6NC98 1476 aa18.22■□□□□ 0.51
VEPH1-211ENST00000482434 URB2Q14146 1524 aaKnown RBP18.15■□□□□ 0.5
VEPH1-211ENST00000482434 PRDM2Q13029 1718 aa17.95■□□□□ 0.46
VEPH1-211ENST00000482434 TOPBP1Q92547 1522 aa17.95■□□□□ 0.46
VEPH1-211ENST00000482434 ZNF608Q9ULD9 1512 aaPredicted RBP17.93■□□□□ 0.46
VEPH1-211ENST00000482434 IFT140Q96RY7 1462 aa17.89■□□□□ 0.45
VEPH1-211ENST00000482434 OSCARQ8IYS5 282 aa17.87■□□□□ 0.45
VEPH1-211ENST00000482434 SUPT5HO00267 1087 aaKnown RBP17.86■□□□□ 0.45
VEPH1-211ENST00000482434 DNMBPQ6XZF7 1577 aa17.85■□□□□ 0.45
VEPH1-211ENST00000482434 TRIM41Q8WV44 630 aa17.84■□□□□ 0.45
VEPH1-211ENST00000482434 ABCC8Q09428 1581 aa17.83■□□□□ 0.45
VEPH1-211ENST00000482434 AQRO60306 1485 aaKnown RBP eCLIP17.79■□□□□ 0.44
VEPH1-211ENST00000482434 POLA1P09884 1462 aaPredicted RBP17.79■□□□□ 0.44
VEPH1-211ENST00000482434 RAD54L2Q9Y4B4 1467 aa17.77■□□□□ 0.44
VEPH1-211ENST00000482434 TARBP1Q13395 1621 aaKnown RBP17.76■□□□□ 0.43
VEPH1-211ENST00000482434 EIF4G3O43432 1585 aaKnown RBP17.74■□□□□ 0.43
VEPH1-211ENST00000482434 CUX1P39880 1505 aa17.72■□□□□ 0.43
VEPH1-211ENST00000482434 SOGA1O94964 1423 aa17.72■□□□□ 0.43
VEPH1-211ENST00000482434 TDRD9Q8NDG6 1382 aaKnown RBP17.71■□□□□ 0.43
VEPH1-211ENST00000482434 FGD5Q6ZNL6 1462 aa17.69■□□□□ 0.42
VEPH1-211ENST00000482434 FBLN2P98095 1184 aa17.63■□□□□ 0.41
VEPH1-211ENST00000482434 RIMBP3CA6NJZ7 1639 aa17.58■□□□□ 0.41
VEPH1-211ENST00000482434 RIMBP3BA6NNM3 1639 aa17.58■□□□□ 0.41
VEPH1-211ENST00000482434 RIMBP3Q9UFD9 1639 aa17.58■□□□□ 0.41
VEPH1-211ENST00000482434 ARHGEF11O15085 1522 aa17.57■□□□□ 0.4
VEPH1-211ENST00000482434 SNAPC4Q5SXM2 1469 aa17.56■□□□□ 0.4
VEPH1-211ENST00000482434 CHD1O14646 1710 aa17.55■□□□□ 0.4
VEPH1-211ENST00000482434 GRIN2BQ13224 1484 aa17.51■□□□□ 0.39
VEPH1-211ENST00000482434 CHMP7Q8WUX9 453 aaPredicted RBP17.5■□□□□ 0.39
VEPH1-211ENST00000482434 CYB5RLQ6IPT4 315 aa17.49■□□□□ 0.39
VEPH1-211ENST00000482434 GAPVD1Q14C86 1478 aa17.49■□□□□ 0.39
VEPH1-211ENST00000482434 WDR97A6NE52 1622 aa17.48■□□□□ 0.39
VEPH1-211ENST00000482434 MAGI1Q96QZ7 1491 aaPredicted RBP17.48■□□□□ 0.39
VEPH1-211ENST00000482434 ABCA10Q8WWZ4 1543 aa17.47■□□□□ 0.39
VEPH1-211ENST00000482434 MSH5O43196 834 aa17.47■□□□□ 0.39
VEPH1-211ENST00000482434 WRNQ14191 1432 aaPredicted RBP eCLIP17.46■□□□□ 0.39
VEPH1-211ENST00000482434 POTEDQ86YR6 584 aa17.44■□□□□ 0.38
VEPH1-211ENST00000482434 SYNJ1O43426 1573 aa17.44■□□□□ 0.38
VEPH1-211ENST00000482434 SYNJ2O15056 1496 aa17.44■□□□□ 0.38
VEPH1-211ENST00000482434 ARAP1Q96P48 1450 aa17.44■□□□□ 0.38
VEPH1-211ENST00000482434 ABCA5Q8WWZ7 1642 aa17.42■□□□□ 0.38
VEPH1-211ENST00000482434 CLASP1Q7Z460 1538 aa17.42■□□□□ 0.38
VEPH1-211ENST00000482434 TOP2BQ02880 1626 aa17.4■□□□□ 0.38
VEPH1-211ENST00000482434 BIVM-ERCC5R4GMW8 1640 aa17.37■□□□□ 0.37
VEPH1-211ENST00000482434 PBRM1Q86U86 1689 aa17.37■□□□□ 0.37
VEPH1-211ENST00000482434 GRIN2AQ12879 1464 aa17.31■□□□□ 0.36
VEPH1-211ENST00000482434 ADAMTS12P58397 1594 aa17.28■□□□□ 0.36
VEPH1-211ENST00000482434 PIAS4Q8N2W9 510 aaPredicted RBP17.28■□□□□ 0.36
VEPH1-211ENST00000482434 PLPPR3Q6T4P5 718 aa17.26■□□□□ 0.35
VEPH1-211ENST00000482434 FHAD1B1AJZ9 1412 aa17.26■□□□□ 0.35
VEPH1-211ENST00000482434 NUP160Q12769 1436 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms