RNA–Protein interactions for RNA: ENST00000482273.1

HLCS-206, Transcript of holocarboxylase synthetase, humanhuman

TSL 2

Gene HLCS, Length 729 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-206ENST00000482273 AEBP2Q6ZN18 517 aaPredicted RBP18.91■□□□□ 0.62
HLCS-206ENST00000482273 CHIC1Q5VXU3 224 aa18.08■□□□□ 0.48
HLCS-206ENST00000482273 NISCHQ9Y2I1 1504 aa17.85■□□□□ 0.45
HLCS-206ENST00000482273 ABCC9O60706 1549 aa16.19■□□□□ 0.18
HLCS-206ENST00000482273 SENP3Q9H4L4 574 aaPredicted RBP16.09■□□□□ 0.17
HLCS-206ENST00000482273 CCDC180Q9P1Z9 1646 aa15.94■□□□□ 0.14
HLCS-206ENST00000482273 PHF23Q9BUL5 403 aaPredicted RBP15.92■□□□□ 0.14
HLCS-206ENST00000482273 DCAF8L2P0C7V8 631 aa15.33■□□□□ 0.04
HLCS-206ENST00000482273 RB1CC1Q8TDY2 1594 aa15.25■□□□□ 0.03
HLCS-206ENST00000482273 DNAJC5BQ9UF47 199 aa15.22■□□□□ 0.03
HLCS-206ENST00000482273 PABPN1Q86U42 306 aaKnown RBP eCLIP15.13■□□□□ 0.01
HLCS-206ENST00000482273 FOXD1Q16676 465 aa15.1■□□□□ 0.01
HLCS-206ENST00000482273 NACADO15069 1562 aa15.1■□□□□ 0.01
HLCS-206ENST00000482273 UNC13AQ9UPW8 1703 aa14.94□□□□□ -0.02
HLCS-206ENST00000482273 PLPPR3Q6T4P5 718 aa14.86□□□□□ -0.03
HLCS-206ENST00000482273 BICRAQ9NZM4 1560 aa14.84□□□□□ -0.03
HLCS-206ENST00000482273 MYO15BQ96JP2 1530 aa14.78□□□□□ -0.04
HLCS-206ENST00000482273 ZCCHC6Q5VYS8 1495 aaKnown RBP14.78□□□□□ -0.04
HLCS-206ENST00000482273 SCRIBQ14160 1630 aa14.73□□□□□ -0.05
HLCS-206ENST00000482273 POTEDQ86YR6 584 aa14.62□□□□□ -0.07
HLCS-206ENST00000482273 DCAF1Q9Y4B6 1507 aa14.61□□□□□ -0.07
HLCS-206ENST00000482273 CC2D2AQ9P2K1 1620 aa14.55□□□□□ -0.08
HLCS-206ENST00000482273 CECR2Q9BXF3 1484 aa14.52□□□□□ -0.08
HLCS-206ENST00000482273 EIF4G1Q04637 1599 aaKnown RBP14.48□□□□□ -0.09
HLCS-206ENST00000482273 SHROOM4Q9ULL8 1493 aa14.45□□□□□ -0.1
HLCS-206ENST00000482273 MSH5O43196 834 aa14.24□□□□□ -0.13
HLCS-206ENST00000482273 ATAD2BQ9ULI0 1458 aa13.97□□□□□ -0.17
HLCS-206ENST00000482273 NCAPD3P42695 1498 aa13.95□□□□□ -0.18
HLCS-206ENST00000482273 SMARCA4P51532 1647 aa13.95□□□□□ -0.18
HLCS-206ENST00000482273 ERCC6Q03468 1493 aa13.94□□□□□ -0.18
HLCS-206ENST00000482273 ADRA2BP18089 450 aa13.92□□□□□ -0.18
HLCS-206ENST00000482273 PIAS4Q8N2W9 510 aaPredicted RBP13.92□□□□□ -0.18
HLCS-206ENST00000482273 NESP48681 1621 aa13.91□□□□□ -0.18
HLCS-206ENST00000482273 PPP6R1Q9UPN7 881 aa13.91□□□□□ -0.18
HLCS-206ENST00000482273 DNAJC5Q9H3Z4 198 aa13.88□□□□□ -0.19
HLCS-206ENST00000482273 SMARCA2P51531 1590 aa13.88□□□□□ -0.19
HLCS-206ENST00000482273 BAZ1BQ9UIG0 1483 aaKnown RBP13.86□□□□□ -0.19
HLCS-206ENST00000482273 BAZ1AQ9NRL2 1556 aaPredicted RBP13.84□□□□□ -0.19
HLCS-206ENST00000482273 HMGXB3Q12766 1538 aa13.84□□□□□ -0.19
HLCS-206ENST00000482273 MROH2BQ7Z745 1585 aa13.83□□□□□ -0.2
HLCS-206ENST00000482273 CUX2O14529 1486 aa13.8□□□□□ -0.2
HLCS-206ENST00000482273 PEG3Q9GZU2 1588 aa13.71□□□□□ -0.22
HLCS-206ENST00000482273 WIZO95785 1651 aa13.68□□□□□ -0.22
HLCS-206ENST00000482273 THOC2Q8NI27 1593 aaKnown RBP13.66□□□□□ -0.22
HLCS-206ENST00000482273 KIF21AQ7Z4S6 1674 aa13.66□□□□□ -0.22
HLCS-206ENST00000482273 LAMC3Q9Y6N6 1575 aa13.65□□□□□ -0.22
HLCS-206ENST00000482273 PDS5BQ9NTI5 1447 aa13.6□□□□□ -0.23
HLCS-206ENST00000482273 CADPSQ9ULU8 1353 aa13.58□□□□□ -0.24
HLCS-206ENST00000482273 MRC2Q9UBG0 1479 aa13.51□□□□□ -0.25
HLCS-206ENST00000482273 RSF1Q96T23 1441 aaPredicted RBP13.5□□□□□ -0.25
HLCS-206ENST00000482273 FANCD2Q9BXW9 1451 aa13.46□□□□□ -0.25
HLCS-206ENST00000482273 CEP164Q9UPV0 1460 aa13.46□□□□□ -0.25
HLCS-206ENST00000482273 WDR62O43379 1518 aa13.45□□□□□ -0.26
HLCS-206ENST00000482273 TRIM41Q8WV44 630 aa13.45□□□□□ -0.26
HLCS-206ENST00000482273 TOP2AP11388 1531 aaKnown RBP13.43□□□□□ -0.26
HLCS-206ENST00000482273 CFTRP13569 1480 aa13.39□□□□□ -0.27
HLCS-206ENST00000482273 URB2Q14146 1524 aaKnown RBP13.36□□□□□ -0.27
HLCS-206ENST00000482273 CCDC88BA6NC98 1476 aa13.32□□□□□ -0.28
HLCS-206ENST00000482273 KCNA4P22459 653 aa13.25□□□□□ -0.29
HLCS-206ENST00000482273 ZNF608Q9ULD9 1512 aaPredicted RBP13.24□□□□□ -0.29
HLCS-206ENST00000482273 OSCARQ8IYS5 282 aa13.24□□□□□ -0.29
HLCS-206ENST00000482273 PRDM2Q13029 1718 aa13.21□□□□□ -0.3
HLCS-206ENST00000482273 TOPBP1Q92547 1522 aa13.19□□□□□ -0.3
HLCS-206ENST00000482273 IFT140Q96RY7 1462 aa13.16□□□□□ -0.3
HLCS-206ENST00000482273 AQRO60306 1485 aaKnown RBP eCLIP13.12□□□□□ -0.31
HLCS-206ENST00000482273 FBLN2P98095 1184 aa13.12□□□□□ -0.31
HLCS-206ENST00000482273 PPP4R3CPQ6ZMV5 832 aa13.12□□□□□ -0.31
HLCS-206ENST00000482273 EIF4G3O43432 1585 aaKnown RBP13.11□□□□□ -0.31
HLCS-206ENST00000482273 DNMBPQ6XZF7 1577 aa13.11□□□□□ -0.31
HLCS-206ENST00000482273 RAD54L2Q9Y4B4 1467 aa13.1□□□□□ -0.31
HLCS-206ENST00000482273 RIMBP3CA6NJZ7 1639 aa13.1□□□□□ -0.31
HLCS-206ENST00000482273 RIMBP3BA6NNM3 1639 aa13.1□□□□□ -0.31
HLCS-206ENST00000482273 RIMBP3Q9UFD9 1639 aa13.1□□□□□ -0.31
HLCS-206ENST00000482273 SUPT5HO00267 1087 aaKnown RBP13.07□□□□□ -0.32
HLCS-206ENST00000482273 POLA1P09884 1462 aaPredicted RBP13.06□□□□□ -0.32
HLCS-206ENST00000482273 TDRD9Q8NDG6 1382 aaKnown RBP13.06□□□□□ -0.32
HLCS-206ENST00000482273 ABCC8Q09428 1581 aa13.05□□□□□ -0.32
HLCS-206ENST00000482273 TARBP1Q13395 1621 aaKnown RBP13.05□□□□□ -0.32
HLCS-206ENST00000482273 ARHGEF11O15085 1522 aa13.04□□□□□ -0.32
HLCS-206ENST00000482273 CHD1O14646 1710 aa13.04□□□□□ -0.32
HLCS-206ENST00000482273 CYB5RLQ6IPT4 315 aa13.03□□□□□ -0.32
HLCS-206ENST00000482273 SOGA1O94964 1423 aa13.02□□□□□ -0.33
HLCS-206ENST00000482273 FGD5Q6ZNL6 1462 aa13.01□□□□□ -0.33
HLCS-206ENST00000482273 SCAF1Q9H7N4 1312 aaKnown RBP12.99□□□□□ -0.33
HLCS-206ENST00000482273 CUX1P39880 1505 aa12.98□□□□□ -0.33
HLCS-206ENST00000482273 SNAPC4Q5SXM2 1469 aa12.97□□□□□ -0.33
HLCS-206ENST00000482273 TRHP20396 242 aaPredicted RBP12.93□□□□□ -0.34
HLCS-206ENST00000482273 CHMP7Q8WUX9 453 aaPredicted RBP12.93□□□□□ -0.34
HLCS-206ENST00000482273 ARAP1Q96P48 1450 aa12.92□□□□□ -0.34
HLCS-206ENST00000482273 NCBP3Q53F19 620 aaKnown RBP12.91□□□□□ -0.34
HLCS-206ENST00000482273 GRIN2BQ13224 1484 aa12.87□□□□□ -0.35
HLCS-206ENST00000482273 GAPVD1Q14C86 1478 aa12.85□□□□□ -0.35
HLCS-206ENST00000482273 WDR97A6NE52 1622 aa12.84□□□□□ -0.35
HLCS-206ENST00000482273 MAGI1Q96QZ7 1491 aaPredicted RBP12.84□□□□□ -0.35
HLCS-206ENST00000482273 PBRM1Q86U86 1689 aa12.83□□□□□ -0.35
HLCS-206ENST00000482273 CLASP1Q7Z460 1538 aa12.83□□□□□ -0.35
HLCS-206ENST00000482273 SYNJ1O43426 1573 aa12.82□□□□□ -0.36
HLCS-206ENST00000482273 SYNJ2O15056 1496 aa12.82□□□□□ -0.36
HLCS-206ENST00000482273 ABCA10Q8WWZ4 1543 aa12.78□□□□□ -0.36
HLCS-206ENST00000482273 ABCA5Q8WWZ7 1642 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms