RNA–Protein interactions for RNA: ENST00000482143.5

TSPAN1-207, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 827 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-207ENST00000482143 NISCHQ9Y2I1 1504 aa32.74■■■□□ 2.83
TSPAN1-207ENST00000482143 ABCC9O60706 1549 aa30.22■■■□□ 2.43
TSPAN1-207ENST00000482143 CCDC180Q9P1Z9 1646 aa29.74■■■□□ 2.35
TSPAN1-207ENST00000482143 DNAJC5BQ9UF47 199 aa28.79■■■□□ 2.2
TSPAN1-207ENST00000482143 RB1CC1Q8TDY2 1594 aa28.55■■■□□ 2.16
TSPAN1-207ENST00000482143 NACADO15069 1562 aa28.17■■■□□ 2.1
TSPAN1-207ENST00000482143 PABPN1Q86U42 306 aaKnown RBP eCLIP28■■■□□ 2.07
TSPAN1-207ENST00000482143 DCAF8L2P0C7V8 631 aa27.99■■■□□ 2.07
TSPAN1-207ENST00000482143 UNC13AQ9UPW8 1703 aa27.97■■■□□ 2.07
TSPAN1-207ENST00000482143 BICRAQ9NZM4 1560 aa27.65■■■□□ 2.02
TSPAN1-207ENST00000482143 MYO15BQ96JP2 1530 aa27.52■■■□□ 2
TSPAN1-207ENST00000482143 CC2D2AQ9P2K1 1620 aa27.28■■□□□ 1.96
TSPAN1-207ENST00000482143 CECR2Q9BXF3 1484 aa27.26■■□□□ 1.95
TSPAN1-207ENST00000482143 SHROOM4Q9ULL8 1493 aa27.24■■□□□ 1.95
TSPAN1-207ENST00000482143 EIF4G1Q04637 1599 aaKnown RBP27.07■■□□□ 1.92
TSPAN1-207ENST00000482143 SCRIBQ14160 1630 aa27.07■■□□□ 1.92
TSPAN1-207ENST00000482143 DNAJC5Q9H3Z4 198 aa27.05■■□□□ 1.92
TSPAN1-207ENST00000482143 ZCCHC6Q5VYS8 1495 aaKnown RBP27.01■■□□□ 1.91
TSPAN1-207ENST00000482143 DCAF1Q9Y4B6 1507 aa26.98■■□□□ 1.91
TSPAN1-207ENST00000482143 CUX2O14529 1486 aa26.25■■□□□ 1.79
TSPAN1-207ENST00000482143 ERCC6Q03468 1493 aa26.19■■□□□ 1.78
TSPAN1-207ENST00000482143 NCAPD3P42695 1498 aa25.94■■□□□ 1.74
TSPAN1-207ENST00000482143 ATAD2BQ9ULI0 1458 aa25.8■■□□□ 1.72
TSPAN1-207ENST00000482143 SMARCA2P51531 1590 aa25.78■■□□□ 1.72
TSPAN1-207ENST00000482143 NESP48681 1621 aa25.77■■□□□ 1.72
TSPAN1-207ENST00000482143 HMGXB3Q12766 1538 aa25.77■■□□□ 1.72
TSPAN1-207ENST00000482143 SMARCA4P51532 1647 aa25.73■■□□□ 1.71
TSPAN1-207ENST00000482143 THOC2Q8NI27 1593 aaKnown RBP25.65■■□□□ 1.7
TSPAN1-207ENST00000482143 BAZ1BQ9UIG0 1483 aaKnown RBP25.61■■□□□ 1.69
TSPAN1-207ENST00000482143 LAMC3Q9Y6N6 1575 aa25.55■■□□□ 1.68
TSPAN1-207ENST00000482143 KIF21AQ7Z4S6 1674 aa25.54■■□□□ 1.68
TSPAN1-207ENST00000482143 TRIM41Q8WV44 630 aa25.53■■□□□ 1.68
TSPAN1-207ENST00000482143 BAZ1AQ9NRL2 1556 aaPredicted RBP25.52■■□□□ 1.68
TSPAN1-207ENST00000482143 PEG3Q9GZU2 1588 aa25.41■■□□□ 1.66
TSPAN1-207ENST00000482143 PDS5BQ9NTI5 1447 aa25.39■■□□□ 1.66
TSPAN1-207ENST00000482143 MROH2BQ7Z745 1585 aa25.22■■□□□ 1.63
TSPAN1-207ENST00000482143 MRC2Q9UBG0 1479 aa25.21■■□□□ 1.63
TSPAN1-207ENST00000482143 WDR62O43379 1518 aa25.16■■□□□ 1.62
TSPAN1-207ENST00000482143 CADPSQ9ULU8 1353 aa25.14■■□□□ 1.61
TSPAN1-207ENST00000482143 CEP164Q9UPV0 1460 aa25.03■■□□□ 1.6
TSPAN1-207ENST00000482143 WIZO95785 1651 aa24.97■■□□□ 1.59
TSPAN1-207ENST00000482143 OSCARQ8IYS5 282 aa24.95■■□□□ 1.58
TSPAN1-207ENST00000482143 FANCD2Q9BXW9 1451 aa24.92■■□□□ 1.58
TSPAN1-207ENST00000482143 RIMBP3CA6NJZ7 1639 aa24.75■■□□□ 1.55
TSPAN1-207ENST00000482143 RIMBP3BA6NNM3 1639 aa24.75■■□□□ 1.55
TSPAN1-207ENST00000482143 RIMBP3Q9UFD9 1639 aa24.75■■□□□ 1.55
TSPAN1-207ENST00000482143 CFTRP13569 1480 aa24.74■■□□□ 1.55
TSPAN1-207ENST00000482143 URB2Q14146 1524 aaKnown RBP24.72■■□□□ 1.55
TSPAN1-207ENST00000482143 PRDM2Q13029 1718 aa24.66■■□□□ 1.54
TSPAN1-207ENST00000482143 TOP2AP11388 1531 aaKnown RBP24.59■■□□□ 1.53
TSPAN1-207ENST00000482143 ARHGEF11O15085 1522 aa24.57■■□□□ 1.52
TSPAN1-207ENST00000482143 RSF1Q96T23 1441 aaPredicted RBP24.52■■□□□ 1.52
TSPAN1-207ENST00000482143 IFT140Q96RY7 1462 aa24.51■■□□□ 1.51
TSPAN1-207ENST00000482143 ZNF608Q9ULD9 1512 aaPredicted RBP24.5■■□□□ 1.51
TSPAN1-207ENST00000482143 EIF4G3O43432 1585 aaKnown RBP24.43■■□□□ 1.5
TSPAN1-207ENST00000482143 TRHP20396 242 aaPredicted RBP24.42■■□□□ 1.5
TSPAN1-207ENST00000482143 CYB5RLQ6IPT4 315 aa24.42■■□□□ 1.5
TSPAN1-207ENST00000482143 CHD1O14646 1710 aa24.41■■□□□ 1.5
TSPAN1-207ENST00000482143 TOPBP1Q92547 1522 aa24.37■■□□□ 1.49
TSPAN1-207ENST00000482143 ABCC8Q09428 1581 aa24.31■■□□□ 1.48
TSPAN1-207ENST00000482143 CCDC88BA6NC98 1476 aa24.27■■□□□ 1.48
TSPAN1-207ENST00000482143 DNMBPQ6XZF7 1577 aa24.27■■□□□ 1.48
TSPAN1-207ENST00000482143 ARAP1Q96P48 1450 aa24.26■■□□□ 1.47
TSPAN1-207ENST00000482143 FBLN2P98095 1184 aa24.26■■□□□ 1.47
TSPAN1-207ENST00000482143 AQRO60306 1485 aaKnown RBP eCLIP24.22■■□□□ 1.47
TSPAN1-207ENST00000482143 TARBP1Q13395 1621 aaKnown RBP24.21■■□□□ 1.47
TSPAN1-207ENST00000482143 AEBP2Q6ZN18 517 aaPredicted RBP24.15■■□□□ 1.46
TSPAN1-207ENST00000482143 POLA1P09884 1462 aaPredicted RBP24.08■■□□□ 1.45
TSPAN1-207ENST00000482143 SYNJ1O43426 1573 aa24.01■■□□□ 1.43
TSPAN1-207ENST00000482143 RAD54L2Q9Y4B4 1467 aa24■■□□□ 1.43
TSPAN1-207ENST00000482143 SNAPC4Q5SXM2 1469 aa24■■□□□ 1.43
TSPAN1-207ENST00000482143 CLASP1Q7Z460 1538 aa23.99■■□□□ 1.43
TSPAN1-207ENST00000482143 TDRD9Q8NDG6 1382 aaKnown RBP23.98■■□□□ 1.43
TSPAN1-207ENST00000482143 SOGA1O94964 1423 aa23.97■■□□□ 1.43
TSPAN1-207ENST00000482143 WDR97A6NE52 1622 aa23.95■■□□□ 1.43
TSPAN1-207ENST00000482143 CHMP7Q8WUX9 453 aaPredicted RBP23.95■■□□□ 1.42
TSPAN1-207ENST00000482143 MAGI1Q96QZ7 1491 aaPredicted RBP23.9■■□□□ 1.42
TSPAN1-207ENST00000482143 FGD5Q6ZNL6 1462 aa23.88■■□□□ 1.41
TSPAN1-207ENST00000482143 GRIN2BQ13224 1484 aa23.84■■□□□ 1.41
TSPAN1-207ENST00000482143 PBRM1Q86U86 1689 aa23.83■■□□□ 1.41
TSPAN1-207ENST00000482143 SYNJ2O15056 1496 aa23.82■■□□□ 1.4
TSPAN1-207ENST00000482143 GAPVD1Q14C86 1478 aa23.79■■□□□ 1.4
TSPAN1-207ENST00000482143 CUX1P39880 1505 aa23.74■■□□□ 1.39
TSPAN1-207ENST00000482143 ABCA5Q8WWZ7 1642 aa23.61■■□□□ 1.37
TSPAN1-207ENST00000482143 ERCC6L2Q5T890 1561 aa23.58■■□□□ 1.37
TSPAN1-207ENST00000482143 GRIN2AQ12879 1464 aa23.54■■□□□ 1.36
TSPAN1-207ENST00000482143 ABCA10Q8WWZ4 1543 aa23.54■■□□□ 1.36
TSPAN1-207ENST00000482143 CEP170Q5SW79 1584 aa23.52■■□□□ 1.36
TSPAN1-207ENST00000482143 KIF13AQ9H1H9 1805 aa23.52■■□□□ 1.36
TSPAN1-207ENST00000482143 ADAMTS12P58397 1594 aa23.48■■□□□ 1.35
TSPAN1-207ENST00000482143 SHROOM2Q13796 1616 aa23.44■■□□□ 1.34
TSPAN1-207ENST00000482143 NUP160Q12769 1436 aa23.42■■□□□ 1.34
TSPAN1-207ENST00000482143 WRNQ14191 1432 aaPredicted RBP eCLIP23.37■■□□□ 1.33
TSPAN1-207ENST00000482143 FHAD1B1AJZ9 1412 aa23.34■■□□□ 1.33
TSPAN1-207ENST00000482143 PRG4Q92954 1404 aaPredicted RBP23.3■■□□□ 1.32
TSPAN1-207ENST00000482143 BIVM-ERCC5R4GMW8 1640 aa23.29■■□□□ 1.32
TSPAN1-207ENST00000482143 ILDR1Q86SU0 546 aaPredicted RBP23.27■■□□□ 1.32
TSPAN1-207ENST00000482143 ERICH3Q5RHP9 1530 aa23.27■■□□□ 1.32
TSPAN1-207ENST00000482143 NPM1P06748 294 aaKnown RBP eCLIP23.26■■□□□ 1.31
TSPAN1-207ENST00000482143 TOP2BQ02880 1626 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms