RNA–Protein interactions for RNA: ENST00000481974.1

ABLIM1-212, Transcript of actin binding LIM protein 1, humanhuman

TSL 2

Gene ABLIM1, Length 518 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABLIM1-212ENST00000481974 NISCHQ9Y2I1 1504 aa33.06■■■□□ 2.88
ABLIM1-212ENST00000481974 CCDC180Q9P1Z9 1646 aa29.4■■■□□ 2.3
ABLIM1-212ENST00000481974 ABCC9O60706 1549 aa28.77■■■□□ 2.2
ABLIM1-212ENST00000481974 RB1CC1Q8TDY2 1594 aa27.68■■■□□ 2.02
ABLIM1-212ENST00000481974 NACADO15069 1562 aa27.64■■■□□ 2.01
ABLIM1-212ENST00000481974 DCAF8L2P0C7V8 631 aa27.61■■■□□ 2.01
ABLIM1-212ENST00000481974 ZCCHC6Q5VYS8 1495 aaKnown RBP27.54■■■□□ 2
ABLIM1-212ENST00000481974 MYO15BQ96JP2 1530 aa27.46■■□□□ 1.99
ABLIM1-212ENST00000481974 DCAF1Q9Y4B6 1507 aa27.36■■□□□ 1.97
ABLIM1-212ENST00000481974 UNC13AQ9UPW8 1703 aa27.02■■□□□ 1.92
ABLIM1-212ENST00000481974 DNAJC5BQ9UF47 199 aa26.88■■□□□ 1.89
ABLIM1-212ENST00000481974 PABPN1Q86U42 306 aaKnown RBP eCLIP26.87■■□□□ 1.89
ABLIM1-212ENST00000481974 BICRAQ9NZM4 1560 aa26.83■■□□□ 1.89
ABLIM1-212ENST00000481974 SCRIBQ14160 1630 aa26.83■■□□□ 1.88
ABLIM1-212ENST00000481974 SHROOM4Q9ULL8 1493 aa26.56■■□□□ 1.84
ABLIM1-212ENST00000481974 EIF4G1Q04637 1599 aaKnown RBP26.12■■□□□ 1.77
ABLIM1-212ENST00000481974 CC2D2AQ9P2K1 1620 aa26.02■■□□□ 1.76
ABLIM1-212ENST00000481974 CECR2Q9BXF3 1484 aa25.85■■□□□ 1.73
ABLIM1-212ENST00000481974 SMARCA4P51532 1647 aa25.66■■□□□ 1.7
ABLIM1-212ENST00000481974 BAZ1AQ9NRL2 1556 aaPredicted RBP25.63■■□□□ 1.69
ABLIM1-212ENST00000481974 ATAD2BQ9ULI0 1458 aa25.52■■□□□ 1.68
ABLIM1-212ENST00000481974 NCAPD3P42695 1498 aa25.5■■□□□ 1.67
ABLIM1-212ENST00000481974 SMARCA2P51531 1590 aa25.49■■□□□ 1.67
ABLIM1-212ENST00000481974 MROH2BQ7Z745 1585 aa25.48■■□□□ 1.67
ABLIM1-212ENST00000481974 PEG3Q9GZU2 1588 aa25.39■■□□□ 1.66
ABLIM1-212ENST00000481974 HMGXB3Q12766 1538 aa25.38■■□□□ 1.65
ABLIM1-212ENST00000481974 DNAJC5Q9H3Z4 198 aa25.36■■□□□ 1.65
ABLIM1-212ENST00000481974 BAZ1BQ9UIG0 1483 aaKnown RBP25.31■■□□□ 1.64
ABLIM1-212ENST00000481974 WIZO95785 1651 aa25.2■■□□□ 1.62
ABLIM1-212ENST00000481974 RSF1Q96T23 1441 aaPredicted RBP25.19■■□□□ 1.62
ABLIM1-212ENST00000481974 TOP2AP11388 1531 aaKnown RBP24.95■■□□□ 1.58
ABLIM1-212ENST00000481974 NESP48681 1621 aa24.89■■□□□ 1.57
ABLIM1-212ENST00000481974 LAMC3Q9Y6N6 1575 aa24.83■■□□□ 1.57
ABLIM1-212ENST00000481974 ERCC6Q03468 1493 aa24.8■■□□□ 1.56
ABLIM1-212ENST00000481974 CADPSQ9ULU8 1353 aa24.76■■□□□ 1.55
ABLIM1-212ENST00000481974 PDS5BQ9NTI5 1447 aa24.67■■□□□ 1.54
ABLIM1-212ENST00000481974 CCDC88BA6NC98 1476 aa24.64■■□□□ 1.54
ABLIM1-212ENST00000481974 CFTRP13569 1480 aa24.61■■□□□ 1.53
ABLIM1-212ENST00000481974 KIF21AQ7Z4S6 1674 aa24.59■■□□□ 1.53
ABLIM1-212ENST00000481974 SUPT5HO00267 1087 aaKnown RBP24.55■■□□□ 1.52
ABLIM1-212ENST00000481974 CUX2O14529 1486 aa24.54■■□□□ 1.52
ABLIM1-212ENST00000481974 THOC2Q8NI27 1593 aaKnown RBP24.52■■□□□ 1.52
ABLIM1-212ENST00000481974 FANCD2Q9BXW9 1451 aa24.48■■□□□ 1.51
ABLIM1-212ENST00000481974 CEP164Q9UPV0 1460 aa24.45■■□□□ 1.51
ABLIM1-212ENST00000481974 MRC2Q9UBG0 1479 aa24.42■■□□□ 1.5
ABLIM1-212ENST00000481974 PRDM2Q13029 1718 aa24.41■■□□□ 1.5
ABLIM1-212ENST00000481974 WDR62O43379 1518 aa24.33■■□□□ 1.49
ABLIM1-212ENST00000481974 URB2Q14146 1524 aaKnown RBP24.24■■□□□ 1.47
ABLIM1-212ENST00000481974 TOPBP1Q92547 1522 aa24.1■■□□□ 1.45
ABLIM1-212ENST00000481974 ABCC8Q09428 1581 aa24.08■■□□□ 1.45
ABLIM1-212ENST00000481974 DNMBPQ6XZF7 1577 aa24.07■■□□□ 1.44
ABLIM1-212ENST00000481974 IFT140Q96RY7 1462 aa23.94■■□□□ 1.42
ABLIM1-212ENST00000481974 CUX1P39880 1505 aa23.91■■□□□ 1.42
ABLIM1-212ENST00000481974 POLA1P09884 1462 aaPredicted RBP23.88■■□□□ 1.41
ABLIM1-212ENST00000481974 TRIM41Q8WV44 630 aa23.86■■□□□ 1.41
ABLIM1-212ENST00000481974 FGD5Q6ZNL6 1462 aa23.83■■□□□ 1.41
ABLIM1-212ENST00000481974 ZNF608Q9ULD9 1512 aaPredicted RBP23.83■■□□□ 1.41
ABLIM1-212ENST00000481974 TARBP1Q13395 1621 aaKnown RBP23.82■■□□□ 1.4
ABLIM1-212ENST00000481974 SOGA1O94964 1423 aa23.78■■□□□ 1.4
ABLIM1-212ENST00000481974 RAD54L2Q9Y4B4 1467 aa23.78■■□□□ 1.4
ABLIM1-212ENST00000481974 WRNQ14191 1432 aaPredicted RBP eCLIP23.76■■□□□ 1.39
ABLIM1-212ENST00000481974 EIF4G3O43432 1585 aaKnown RBP23.74■■□□□ 1.39
ABLIM1-212ENST00000481974 TOP2BQ02880 1626 aa23.7■■□□□ 1.38
ABLIM1-212ENST00000481974 BIVM-ERCC5R4GMW8 1640 aa23.7■■□□□ 1.38
ABLIM1-212ENST00000481974 SYNJ1O43426 1573 aa23.69■■□□□ 1.38
ABLIM1-212ENST00000481974 AQRO60306 1485 aaKnown RBP eCLIP23.69■■□□□ 1.38
ABLIM1-212ENST00000481974 TDRD9Q8NDG6 1382 aaKnown RBP23.65■■□□□ 1.38
ABLIM1-212ENST00000481974 WDR97A6NE52 1622 aa23.64■■□□□ 1.38
ABLIM1-212ENST00000481974 ABCA10Q8WWZ4 1543 aa23.6■■□□□ 1.37
ABLIM1-212ENST00000481974 GRIN2BQ13224 1484 aa23.52■■□□□ 1.36
ABLIM1-212ENST00000481974 GAPVD1Q14C86 1478 aa23.51■■□□□ 1.35
ABLIM1-212ENST00000481974 OSCARQ8IYS5 282 aa23.51■■□□□ 1.35
ABLIM1-212ENST00000481974 ABCA5Q8WWZ7 1642 aa23.5■■□□□ 1.35
ABLIM1-212ENST00000481974 SNAPC4Q5SXM2 1469 aa23.49■■□□□ 1.35
ABLIM1-212ENST00000481974 PBRM1Q86U86 1689 aa23.45■■□□□ 1.34
ABLIM1-212ENST00000481974 MAGI1Q96QZ7 1491 aaPredicted RBP23.45■■□□□ 1.34
ABLIM1-212ENST00000481974 CHD1O14646 1710 aa23.43■■□□□ 1.34
ABLIM1-212ENST00000481974 FBLN2P98095 1184 aa23.41■■□□□ 1.34
ABLIM1-212ENST00000481974 SYNJ2O15056 1496 aa23.36■■□□□ 1.33
ABLIM1-212ENST00000481974 CHMP7Q8WUX9 453 aaPredicted RBP23.35■■□□□ 1.33
ABLIM1-212ENST00000481974 ERICH3Q5RHP9 1530 aa23.31■■□□□ 1.32
ABLIM1-212ENST00000481974 ADAMTS12P58397 1594 aa23.28■■□□□ 1.32
ABLIM1-212ENST00000481974 KIF27Q86VH2 1401 aa23.25■■□□□ 1.31
ABLIM1-212ENST00000481974 FHAD1B1AJZ9 1412 aa23.25■■□□□ 1.31
ABLIM1-212ENST00000481974 GRIN2AQ12879 1464 aa23.2■■□□□ 1.3
ABLIM1-212ENST00000481974 CLASP1Q7Z460 1538 aa23.19■■□□□ 1.3
ABLIM1-212ENST00000481974 IGF1RP08069 1367 aa23.15■■□□□ 1.3
ABLIM1-212ENST00000481974 RIMBP3CA6NJZ7 1639 aa23.15■■□□□ 1.3
ABLIM1-212ENST00000481974 RIMBP3BA6NNM3 1639 aa23.15■■□□□ 1.3
ABLIM1-212ENST00000481974 RIMBP3Q9UFD9 1639 aa23.15■■□□□ 1.3
ABLIM1-212ENST00000481974 ARHGEF11O15085 1522 aa23.14■■□□□ 1.3
ABLIM1-212ENST00000481974 CUL7Q14999 1698 aa23.1■■□□□ 1.29
ABLIM1-212ENST00000481974 NUP160Q12769 1436 aa23.1■■□□□ 1.29
ABLIM1-212ENST00000481974 CEP170Q5SW79 1584 aa23.09■■□□□ 1.29
ABLIM1-212ENST00000481974 RUSC2Q8N2Y8 1516 aa23.03■■□□□ 1.28
ABLIM1-212ENST00000481974 CARMIL1Q5VZK9 1371 aa23.02■■□□□ 1.28
ABLIM1-212ENST00000481974 ARAP1Q96P48 1450 aa22.96■■□□□ 1.27
ABLIM1-212ENST00000481974 SHROOM2Q13796 1616 aa22.93■■□□□ 1.26
ABLIM1-212ENST00000481974 CHIC1Q5VXU3 224 aa22.91■■□□□ 1.26
ABLIM1-212ENST00000481974 CYB5RLQ6IPT4 315 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms