RNA–Protein interactions for RNA: ENST00000481945.1

DFFB-210, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 3

Gene DFFB, Length 636 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-210ENST00000481945 NISCHQ9Y2I1 1504 aa27.41■■□□□ 1.98
DFFB-210ENST00000481945 CCDC180Q9P1Z9 1646 aa24.39■■□□□ 1.49
DFFB-210ENST00000481945 ABCC9O60706 1549 aa24.05■■□□□ 1.44
DFFB-210ENST00000481945 RB1CC1Q8TDY2 1594 aa23.06■■□□□ 1.28
DFFB-210ENST00000481945 NACADO15069 1562 aa23.02■■□□□ 1.28
DFFB-210ENST00000481945 DCAF8L2P0C7V8 631 aa22.94■■□□□ 1.26
DFFB-210ENST00000481945 MYO15BQ96JP2 1530 aa22.88■■□□□ 1.25
DFFB-210ENST00000481945 ZCCHC6Q5VYS8 1495 aaKnown RBP22.79■■□□□ 1.24
DFFB-210ENST00000481945 DCAF1Q9Y4B6 1507 aa22.71■■□□□ 1.23
DFFB-210ENST00000481945 PABPN1Q86U42 306 aaKnown RBP eCLIP22.49■■□□□ 1.19
DFFB-210ENST00000481945 UNC13AQ9UPW8 1703 aa22.45■■□□□ 1.19
DFFB-210ENST00000481945 BICRAQ9NZM4 1560 aa22.4■■□□□ 1.18
DFFB-210ENST00000481945 DNAJC5BQ9UF47 199 aa22.34■■□□□ 1.17
DFFB-210ENST00000481945 SCRIBQ14160 1630 aa22.2■■□□□ 1.15
DFFB-210ENST00000481945 SHROOM4Q9ULL8 1493 aa22.18■■□□□ 1.14
DFFB-210ENST00000481945 EIF4G1Q04637 1599 aaKnown RBP21.81■■□□□ 1.08
DFFB-210ENST00000481945 CC2D2AQ9P2K1 1620 aa21.74■■□□□ 1.07
DFFB-210ENST00000481945 CECR2Q9BXF3 1484 aa21.66■■□□□ 1.06
DFFB-210ENST00000481945 NCAPD3P42695 1498 aa21.3■■□□□ 1
DFFB-210ENST00000481945 SMARCA4P51532 1647 aa21.26■□□□□ 0.99
DFFB-210ENST00000481945 ATAD2BQ9ULI0 1458 aa21.26■□□□□ 0.99
DFFB-210ENST00000481945 BAZ1AQ9NRL2 1556 aaPredicted RBP21.23■□□□□ 0.99
DFFB-210ENST00000481945 SMARCA2P51531 1590 aa21.18■□□□□ 0.98
DFFB-210ENST00000481945 MROH2BQ7Z745 1585 aa21.11■□□□□ 0.97
DFFB-210ENST00000481945 PEG3Q9GZU2 1588 aa21.11■□□□□ 0.97
DFFB-210ENST00000481945 HMGXB3Q12766 1538 aa21.11■□□□□ 0.97
DFFB-210ENST00000481945 BAZ1BQ9UIG0 1483 aaKnown RBP21.02■□□□□ 0.96
DFFB-210ENST00000481945 RSF1Q96T23 1441 aaPredicted RBP20.85■□□□□ 0.93
DFFB-210ENST00000481945 WIZO95785 1651 aa20.83■□□□□ 0.92
DFFB-210ENST00000481945 NESP48681 1621 aa20.78■□□□□ 0.92
DFFB-210ENST00000481945 ERCC6Q03468 1493 aa20.73■□□□□ 0.91
DFFB-210ENST00000481945 LAMC3Q9Y6N6 1575 aa20.69■□□□□ 0.9
DFFB-210ENST00000481945 CADPSQ9ULU8 1353 aa20.66■□□□□ 0.9
DFFB-210ENST00000481945 TOP2AP11388 1531 aaKnown RBP20.63■□□□□ 0.89
DFFB-210ENST00000481945 CUX2O14529 1486 aa20.62■□□□□ 0.89
DFFB-210ENST00000481945 PDS5BQ9NTI5 1447 aa20.6■□□□□ 0.89
DFFB-210ENST00000481945 CFTRP13569 1480 aa20.49■□□□□ 0.87
DFFB-210ENST00000481945 THOC2Q8NI27 1593 aaKnown RBP20.47■□□□□ 0.87
DFFB-210ENST00000481945 KIF21AQ7Z4S6 1674 aa20.45■□□□□ 0.86
DFFB-210ENST00000481945 CCDC88BA6NC98 1476 aa20.42■□□□□ 0.86
DFFB-210ENST00000481945 AEBP2Q6ZN18 517 aaPredicted RBP20.4■□□□□ 0.86
DFFB-210ENST00000481945 FANCD2Q9BXW9 1451 aa20.37■□□□□ 0.85
DFFB-210ENST00000481945 MRC2Q9UBG0 1479 aa20.37■□□□□ 0.85
DFFB-210ENST00000481945 CEP164Q9UPV0 1460 aa20.35■□□□□ 0.85
DFFB-210ENST00000481945 WDR62O43379 1518 aa20.31■□□□□ 0.84
DFFB-210ENST00000481945 DNAJC5Q9H3Z4 198 aa20.28■□□□□ 0.84
DFFB-210ENST00000481945 URB2Q14146 1524 aaKnown RBP20.18■□□□□ 0.82
DFFB-210ENST00000481945 PRDM2Q13029 1718 aa20.16■□□□□ 0.82
DFFB-210ENST00000481945 SUPT5HO00267 1087 aaKnown RBP20.12■□□□□ 0.81
DFFB-210ENST00000481945 ABCC8Q09428 1581 aa20.04■□□□□ 0.8
DFFB-210ENST00000481945 TOPBP1Q92547 1522 aa20.02■□□□□ 0.8
DFFB-210ENST00000481945 DNMBPQ6XZF7 1577 aa19.97■□□□□ 0.79
DFFB-210ENST00000481945 IFT140Q96RY7 1462 aa19.96■□□□□ 0.79
DFFB-210ENST00000481945 ZNF608Q9ULD9 1512 aaPredicted RBP19.88■□□□□ 0.77
DFFB-210ENST00000481945 POLA1P09884 1462 aaPredicted RBP19.85■□□□□ 0.77
DFFB-210ENST00000481945 TARBP1Q13395 1621 aaKnown RBP19.81■□□□□ 0.76
DFFB-210ENST00000481945 CUX1P39880 1505 aa19.81■□□□□ 0.76
DFFB-210ENST00000481945 SOGA1O94964 1423 aa19.78■□□□□ 0.76
DFFB-210ENST00000481945 OSCARQ8IYS5 282 aa19.78■□□□□ 0.76
DFFB-210ENST00000481945 FGD5Q6ZNL6 1462 aa19.76■□□□□ 0.75
DFFB-210ENST00000481945 RAD54L2Q9Y4B4 1467 aa19.76■□□□□ 0.75
DFFB-210ENST00000481945 AQRO60306 1485 aaKnown RBP eCLIP19.75■□□□□ 0.75
DFFB-210ENST00000481945 EIF4G3O43432 1585 aaKnown RBP19.73■□□□□ 0.75
DFFB-210ENST00000481945 TDRD9Q8NDG6 1382 aaKnown RBP19.7■□□□□ 0.74
DFFB-210ENST00000481945 WDR97A6NE52 1622 aa19.65■□□□□ 0.74
DFFB-210ENST00000481945 WRNQ14191 1432 aaPredicted RBP eCLIP19.62■□□□□ 0.73
DFFB-210ENST00000481945 ABCA10Q8WWZ4 1543 aa19.59■□□□□ 0.73
DFFB-210ENST00000481945 TOP2BQ02880 1626 aa19.58■□□□□ 0.72
DFFB-210ENST00000481945 GRIN2BQ13224 1484 aa19.56■□□□□ 0.72
DFFB-210ENST00000481945 BIVM-ERCC5R4GMW8 1640 aa19.55■□□□□ 0.72
DFFB-210ENST00000481945 SYNJ1O43426 1573 aa19.55■□□□□ 0.72
DFFB-210ENST00000481945 GAPVD1Q14C86 1478 aa19.54■□□□□ 0.72
DFFB-210ENST00000481945 SNAPC4Q5SXM2 1469 aa19.54■□□□□ 0.72
DFFB-210ENST00000481945 MAGI1Q96QZ7 1491 aaPredicted RBP19.53■□□□□ 0.72
DFFB-210ENST00000481945 FBLN2P98095 1184 aa19.52■□□□□ 0.72
DFFB-210ENST00000481945 ABCA5Q8WWZ7 1642 aa19.48■□□□□ 0.71
DFFB-210ENST00000481945 CHD1O14646 1710 aa19.48■□□□□ 0.71
DFFB-210ENST00000481945 CHMP7Q8WUX9 453 aaPredicted RBP19.47■□□□□ 0.71
DFFB-210ENST00000481945 SYNJ2O15056 1496 aa19.46■□□□□ 0.71
DFFB-210ENST00000481945 TRIM41Q8WV44 630 aa19.42■□□□□ 0.7
DFFB-210ENST00000481945 PBRM1Q86U86 1689 aa19.4■□□□□ 0.7
DFFB-210ENST00000481945 ARHGEF11O15085 1522 aa19.4■□□□□ 0.7
DFFB-210ENST00000481945 RIMBP3CA6NJZ7 1639 aa19.39■□□□□ 0.69
DFFB-210ENST00000481945 RIMBP3BA6NNM3 1639 aa19.39■□□□□ 0.69
DFFB-210ENST00000481945 RIMBP3Q9UFD9 1639 aa19.39■□□□□ 0.69
DFFB-210ENST00000481945 CLASP1Q7Z460 1538 aa19.35■□□□□ 0.69
DFFB-210ENST00000481945 ERICH3Q5RHP9 1530 aa19.34■□□□□ 0.69
DFFB-210ENST00000481945 FHAD1B1AJZ9 1412 aa19.32■□□□□ 0.68
DFFB-210ENST00000481945 CHIC1Q5VXU3 224 aa19.31■□□□□ 0.68
DFFB-210ENST00000481945 GRIN2AQ12879 1464 aa19.3■□□□□ 0.68
DFFB-210ENST00000481945 ADAMTS12P58397 1594 aa19.3■□□□□ 0.68
DFFB-210ENST00000481945 NUP160Q12769 1436 aa19.25■□□□□ 0.67
DFFB-210ENST00000481945 CYB5RLQ6IPT4 315 aa19.25■□□□□ 0.67
DFFB-210ENST00000481945 ARAP1Q96P48 1450 aa19.24■□□□□ 0.67
DFFB-210ENST00000481945 KIF27Q86VH2 1401 aa19.24■□□□□ 0.67
DFFB-210ENST00000481945 IGF1RP08069 1367 aa19.23■□□□□ 0.67
DFFB-210ENST00000481945 CEP170Q5SW79 1584 aa19.19■□□□□ 0.66
DFFB-210ENST00000481945 SHROOM2Q13796 1616 aa19.09■□□□□ 0.65
DFFB-210ENST00000481945 CUL7Q14999 1698 aa19.08■□□□□ 0.64
DFFB-210ENST00000481945 CARMIL1Q5VZK9 1371 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms