RNA–Protein interactions for RNA: ENST00000481856.1

SDK1-208, Transcript of sidekick cell adhesion molecule 1, humanhuman

TSL 3

Gene SDK1, Length 433 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1-208ENST00000481856 NISCHQ9Y2I1 1504 aa27.61■■■□□ 2.01
SDK1-208ENST00000481856 ABCC9O60706 1549 aa25.76■■□□□ 1.71
SDK1-208ENST00000481856 CCDC180Q9P1Z9 1646 aa25.05■■□□□ 1.6
SDK1-208ENST00000481856 DNAJC5BQ9UF47 199 aa24.65■■□□□ 1.54
SDK1-208ENST00000481856 RB1CC1Q8TDY2 1594 aa24.25■■□□□ 1.47
SDK1-208ENST00000481856 PABPN1Q86U42 306 aaKnown RBP eCLIP23.92■■□□□ 1.42
SDK1-208ENST00000481856 NACADO15069 1562 aa23.9■■□□□ 1.42
SDK1-208ENST00000481856 DCAF8L2P0C7V8 631 aa23.89■■□□□ 1.41
SDK1-208ENST00000481856 UNC13AQ9UPW8 1703 aa23.54■■□□□ 1.36
SDK1-208ENST00000481856 BICRAQ9NZM4 1560 aa23.39■■□□□ 1.33
SDK1-208ENST00000481856 CECR2Q9BXF3 1484 aa23.29■■□□□ 1.32
SDK1-208ENST00000481856 MYO15BQ96JP2 1530 aa23.28■■□□□ 1.32
SDK1-208ENST00000481856 DNAJC5Q9H3Z4 198 aa23.25■■□□□ 1.31
SDK1-208ENST00000481856 CC2D2AQ9P2K1 1620 aa23.19■■□□□ 1.3
SDK1-208ENST00000481856 SHROOM4Q9ULL8 1493 aa23.13■■□□□ 1.29
SDK1-208ENST00000481856 EIF4G1Q04637 1599 aaKnown RBP22.97■■□□□ 1.27
SDK1-208ENST00000481856 SCRIBQ14160 1630 aa22.82■■□□□ 1.24
SDK1-208ENST00000481856 DCAF1Q9Y4B6 1507 aa22.74■■□□□ 1.23
SDK1-208ENST00000481856 ZCCHC6Q5VYS8 1495 aaKnown RBP22.69■■□□□ 1.22
SDK1-208ENST00000481856 CUX2O14529 1486 aa22.48■■□□□ 1.19
SDK1-208ENST00000481856 ERCC6Q03468 1493 aa22.4■■□□□ 1.18
SDK1-208ENST00000481856 TRIM41Q8WV44 630 aa22.08■■□□□ 1.13
SDK1-208ENST00000481856 NCAPD3P42695 1498 aa22.04■■□□□ 1.12
SDK1-208ENST00000481856 ATAD2BQ9ULI0 1458 aa21.87■■□□□ 1.09
SDK1-208ENST00000481856 NESP48681 1621 aa21.87■■□□□ 1.09
SDK1-208ENST00000481856 SMARCA2P51531 1590 aa21.84■■□□□ 1.09
SDK1-208ENST00000481856 HMGXB3Q12766 1538 aa21.8■■□□□ 1.08
SDK1-208ENST00000481856 THOC2Q8NI27 1593 aaKnown RBP21.74■■□□□ 1.07
SDK1-208ENST00000481856 BAZ1BQ9UIG0 1483 aaKnown RBP21.7■■□□□ 1.06
SDK1-208ENST00000481856 LAMC3Q9Y6N6 1575 aa21.67■■□□□ 1.06
SDK1-208ENST00000481856 SMARCA4P51532 1647 aa21.66■■□□□ 1.06
SDK1-208ENST00000481856 PDS5BQ9NTI5 1447 aa21.66■■□□□ 1.06
SDK1-208ENST00000481856 KIF21AQ7Z4S6 1674 aa21.56■■□□□ 1.04
SDK1-208ENST00000481856 BAZ1AQ9NRL2 1556 aaPredicted RBP21.53■■□□□ 1.04
SDK1-208ENST00000481856 OSCARQ8IYS5 282 aa21.48■■□□□ 1.03
SDK1-208ENST00000481856 MRC2Q9UBG0 1479 aa21.44■■□□□ 1.02
SDK1-208ENST00000481856 PEG3Q9GZU2 1588 aa21.41■■□□□ 1.02
SDK1-208ENST00000481856 CADPSQ9ULU8 1353 aa21.39■■□□□ 1.02
SDK1-208ENST00000481856 WDR62O43379 1518 aa21.34■■□□□ 1.01
SDK1-208ENST00000481856 CEP164Q9UPV0 1460 aa21.25■□□□□ 0.99
SDK1-208ENST00000481856 MROH2BQ7Z745 1585 aa21.23■□□□□ 0.99
SDK1-208ENST00000481856 FANCD2Q9BXW9 1451 aa21.14■□□□□ 0.98
SDK1-208ENST00000481856 RIMBP3CA6NJZ7 1639 aa21.09■□□□□ 0.97
SDK1-208ENST00000481856 RIMBP3BA6NNM3 1639 aa21.09■□□□□ 0.97
SDK1-208ENST00000481856 RIMBP3Q9UFD9 1639 aa21.09■□□□□ 0.97
SDK1-208ENST00000481856 TRHP20396 242 aaPredicted RBP21.09■□□□□ 0.97
SDK1-208ENST00000481856 AEBP2Q6ZN18 517 aaPredicted RBP21.04■□□□□ 0.96
SDK1-208ENST00000481856 CYB5RLQ6IPT4 315 aa21.01■□□□□ 0.95
SDK1-208ENST00000481856 ARHGEF11O15085 1522 aa20.97■□□□□ 0.95
SDK1-208ENST00000481856 WIZO95785 1651 aa20.96■□□□□ 0.95
SDK1-208ENST00000481856 CFTRP13569 1480 aa20.95■□□□□ 0.94
SDK1-208ENST00000481856 URB2Q14146 1524 aaKnown RBP20.93■□□□□ 0.94
SDK1-208ENST00000481856 IFT140Q96RY7 1462 aa20.85■□□□□ 0.93
SDK1-208ENST00000481856 ZNF608Q9ULD9 1512 aaPredicted RBP20.78■□□□□ 0.92
SDK1-208ENST00000481856 FBLN2P98095 1184 aa20.77■□□□□ 0.92
SDK1-208ENST00000481856 ARAP1Q96P48 1450 aa20.69■□□□□ 0.9
SDK1-208ENST00000481856 TOP2AP11388 1531 aaKnown RBP20.68■□□□□ 0.9
SDK1-208ENST00000481856 PRDM2Q13029 1718 aa20.67■□□□□ 0.9
SDK1-208ENST00000481856 RSF1Q96T23 1441 aaPredicted RBP20.66■□□□□ 0.9
SDK1-208ENST00000481856 ABCC8Q09428 1581 aa20.66■□□□□ 0.9
SDK1-208ENST00000481856 EIF4G3O43432 1585 aaKnown RBP20.64■□□□□ 0.9
SDK1-208ENST00000481856 TOPBP1Q92547 1522 aa20.63■□□□□ 0.89
SDK1-208ENST00000481856 CHD1O14646 1710 aa20.63■□□□□ 0.89
SDK1-208ENST00000481856 AQRO60306 1485 aaKnown RBP eCLIP20.57■□□□□ 0.88
SDK1-208ENST00000481856 DNMBPQ6XZF7 1577 aa20.51■□□□□ 0.87
SDK1-208ENST00000481856 CHMP7Q8WUX9 453 aaPredicted RBP20.48■□□□□ 0.87
SDK1-208ENST00000481856 CCDC88BA6NC98 1476 aa20.46■□□□□ 0.87
SDK1-208ENST00000481856 TARBP1Q13395 1621 aaKnown RBP20.43■□□□□ 0.86
SDK1-208ENST00000481856 SYNJ1O43426 1573 aa20.39■□□□□ 0.85
SDK1-208ENST00000481856 TDRD9Q8NDG6 1382 aaKnown RBP20.38■□□□□ 0.85
SDK1-208ENST00000481856 POLA1P09884 1462 aaPredicted RBP20.37■□□□□ 0.85
SDK1-208ENST00000481856 SOGA1O94964 1423 aa20.36■□□□□ 0.85
SDK1-208ENST00000481856 SNAPC4Q5SXM2 1469 aa20.34■□□□□ 0.85
SDK1-208ENST00000481856 CLASP1Q7Z460 1538 aa20.32■□□□□ 0.84
SDK1-208ENST00000481856 RAD54L2Q9Y4B4 1467 aa20.31■□□□□ 0.84
SDK1-208ENST00000481856 GAPVD1Q14C86 1478 aa20.28■□□□□ 0.84
SDK1-208ENST00000481856 MAGI1Q96QZ7 1491 aaPredicted RBP20.28■□□□□ 0.84
SDK1-208ENST00000481856 WDR97A6NE52 1622 aa20.26■□□□□ 0.83
SDK1-208ENST00000481856 GRIN2BQ13224 1484 aa20.24■□□□□ 0.83
SDK1-208ENST00000481856 SYNJ2O15056 1496 aa20.23■□□□□ 0.83
SDK1-208ENST00000481856 FGD5Q6ZNL6 1462 aa20.17■□□□□ 0.82
SDK1-208ENST00000481856 PBRM1Q86U86 1689 aa20.04■□□□□ 0.8
SDK1-208ENST00000481856 ILDR1Q86SU0 546 aaPredicted RBP20■□□□□ 0.79
SDK1-208ENST00000481856 NPM1P06748 294 aaKnown RBP eCLIP19.99■□□□□ 0.79
SDK1-208ENST00000481856 CUX1P39880 1505 aa19.98■□□□□ 0.79
SDK1-208ENST00000481856 FAM69CQ0P6D2 419 aa19.95■□□□□ 0.78
SDK1-208ENST00000481856 ERCC6L2Q5T890 1561 aa19.94■□□□□ 0.78
SDK1-208ENST00000481856 GRIN2AQ12879 1464 aa19.93■□□□□ 0.78
SDK1-208ENST00000481856 CEP170Q5SW79 1584 aa19.93■□□□□ 0.78
SDK1-208ENST00000481856 KIF13AQ9H1H9 1805 aa19.92■□□□□ 0.78
SDK1-208ENST00000481856 ABCA10Q8WWZ4 1543 aa19.89■□□□□ 0.77
SDK1-208ENST00000481856 ABCA5Q8WWZ7 1642 aa19.86■□□□□ 0.77
SDK1-208ENST00000481856 NUP160Q12769 1436 aa19.85■□□□□ 0.77
SDK1-208ENST00000481856 KDM4FA0A1W2PPD8 638 aa19.84■□□□□ 0.77
SDK1-208ENST00000481856 ABCC10Q5T3U5 1492 aa19.81■□□□□ 0.76
SDK1-208ENST00000481856 PRG4Q92954 1404 aaPredicted RBP19.81■□□□□ 0.76
SDK1-208ENST00000481856 FHAD1B1AJZ9 1412 aa19.8■□□□□ 0.76
SDK1-208ENST00000481856 SHROOM2Q13796 1616 aa19.8■□□□□ 0.76
SDK1-208ENST00000481856 JPH4Q96JJ6 628 aa19.79■□□□□ 0.76
SDK1-208ENST00000481856 KDM6BO15054 1643 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms