RNA–Protein interactions for RNA: ENST00000481761.1

UBP1-209, Transcript of upstream binding protein 1, humanhuman

TSL 3

Gene UBP1, Length 586 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-209ENST00000481761 NISCHQ9Y2I1 1504 aa20.36■□□□□ 0.85
UBP1-209ENST00000481761 ABCC9O60706 1549 aa19.29■□□□□ 0.68
UBP1-209ENST00000481761 DNAJC5BQ9UF47 199 aa18.75■□□□□ 0.59
UBP1-209ENST00000481761 CCDC180Q9P1Z9 1646 aa18.72■□□□□ 0.59
UBP1-209ENST00000481761 RB1CC1Q8TDY2 1594 aa18.06■□□□□ 0.48
UBP1-209ENST00000481761 UNC13AQ9UPW8 1703 aa17.91■□□□□ 0.46
UBP1-209ENST00000481761 NACADO15069 1562 aa17.76■□□□□ 0.43
UBP1-209ENST00000481761 PABPN1Q86U42 306 aaKnown RBP eCLIP17.72■□□□□ 0.43
UBP1-209ENST00000481761 DNAJC5Q9H3Z4 198 aa17.7■□□□□ 0.42
UBP1-209ENST00000481761 BICRAQ9NZM4 1560 aa17.7■□□□□ 0.42
UBP1-209ENST00000481761 CC2D2AQ9P2K1 1620 aa17.47■□□□□ 0.39
UBP1-209ENST00000481761 CECR2Q9BXF3 1484 aa17.44■□□□□ 0.38
UBP1-209ENST00000481761 MYO15BQ96JP2 1530 aa17.3■□□□□ 0.36
UBP1-209ENST00000481761 SHROOM4Q9ULL8 1493 aa17.27■□□□□ 0.36
UBP1-209ENST00000481761 EIF4G1Q04637 1599 aaKnown RBP17.25■□□□□ 0.35
UBP1-209ENST00000481761 DCAF8L2P0C7V8 631 aa17.19■□□□□ 0.34
UBP1-209ENST00000481761 CUX2O14529 1486 aa16.94■□□□□ 0.3
UBP1-209ENST00000481761 SCRIBQ14160 1630 aa16.93■□□□□ 0.3
UBP1-209ENST00000481761 DCAF1Q9Y4B6 1507 aa16.8■□□□□ 0.28
UBP1-209ENST00000481761 ZCCHC6Q5VYS8 1495 aaKnown RBP16.76■□□□□ 0.27
UBP1-209ENST00000481761 ERCC6Q03468 1493 aa16.63■□□□□ 0.25
UBP1-209ENST00000481761 TRIM41Q8WV44 630 aa16.53■□□□□ 0.24
UBP1-209ENST00000481761 THOC2Q8NI27 1593 aaKnown RBP16.51■□□□□ 0.23
UBP1-209ENST00000481761 NESP48681 1621 aa16.41■□□□□ 0.22
UBP1-209ENST00000481761 NCAPD3P42695 1498 aa16.37■□□□□ 0.21
UBP1-209ENST00000481761 KIF21AQ7Z4S6 1674 aa16.3■□□□□ 0.2
UBP1-209ENST00000481761 HMGXB3Q12766 1538 aa16.26■□□□□ 0.19
UBP1-209ENST00000481761 SMARCA2P51531 1590 aa16.24■□□□□ 0.19
UBP1-209ENST00000481761 ATAD2BQ9ULI0 1458 aa16.22■□□□□ 0.19
UBP1-209ENST00000481761 LAMC3Q9Y6N6 1575 aa16.17■□□□□ 0.18
UBP1-209ENST00000481761 BAZ1AQ9NRL2 1556 aaPredicted RBP16.16■□□□□ 0.18
UBP1-209ENST00000481761 SMARCA4P51532 1647 aa16.11■□□□□ 0.17
UBP1-209ENST00000481761 WDR62O43379 1518 aa16.04■□□□□ 0.16
UBP1-209ENST00000481761 RIMBP3CA6NJZ7 1639 aa16.01■□□□□ 0.15
UBP1-209ENST00000481761 RIMBP3BA6NNM3 1639 aa16.01■□□□□ 0.15
UBP1-209ENST00000481761 RIMBP3Q9UFD9 1639 aa16.01■□□□□ 0.15
UBP1-209ENST00000481761 BAZ1BQ9UIG0 1483 aaKnown RBP16■□□□□ 0.15
UBP1-209ENST00000481761 PEG3Q9GZU2 1588 aa15.98■□□□□ 0.15
UBP1-209ENST00000481761 PDS5BQ9NTI5 1447 aa15.97■□□□□ 0.15
UBP1-209ENST00000481761 MRC2Q9UBG0 1479 aa15.97■□□□□ 0.15
UBP1-209ENST00000481761 OSCARQ8IYS5 282 aa15.87■□□□□ 0.13
UBP1-209ENST00000481761 ARHGEF11O15085 1522 aa15.83■□□□□ 0.12
UBP1-209ENST00000481761 CADPSQ9ULU8 1353 aa15.77■□□□□ 0.12
UBP1-209ENST00000481761 CEP164Q9UPV0 1460 aa15.73■□□□□ 0.11
UBP1-209ENST00000481761 MROH2BQ7Z745 1585 aa15.7■□□□□ 0.1
UBP1-209ENST00000481761 FANCD2Q9BXW9 1451 aa15.65■□□□□ 0.1
UBP1-209ENST00000481761 ARAP1Q96P48 1450 aa15.64■□□□□ 0.09
UBP1-209ENST00000481761 URB2Q14146 1524 aaKnown RBP15.63■□□□□ 0.09
UBP1-209ENST00000481761 AEBP2Q6ZN18 517 aaPredicted RBP15.63■□□□□ 0.09
UBP1-209ENST00000481761 CHD1O14646 1710 aa15.58■□□□□ 0.08
UBP1-209ENST00000481761 TRHP20396 242 aaPredicted RBP15.57■□□□□ 0.08
UBP1-209ENST00000481761 CYB5RLQ6IPT4 315 aa15.56■□□□□ 0.08
UBP1-209ENST00000481761 ZNF608Q9ULD9 1512 aaPredicted RBP15.55■□□□□ 0.08
UBP1-209ENST00000481761 PRDM2Q13029 1718 aa15.52■□□□□ 0.08
UBP1-209ENST00000481761 WIZO95785 1651 aa15.52■□□□□ 0.08
UBP1-209ENST00000481761 CFTRP13569 1480 aa15.51■□□□□ 0.07
UBP1-209ENST00000481761 EIF4G3O43432 1585 aaKnown RBP15.5■□□□□ 0.07
UBP1-209ENST00000481761 RSF1Q96T23 1441 aaPredicted RBP15.43■□□□□ 0.06
UBP1-209ENST00000481761 IFT140Q96RY7 1462 aa15.43■□□□□ 0.06
UBP1-209ENST00000481761 CLASP1Q7Z460 1538 aa15.33■□□□□ 0.04
UBP1-209ENST00000481761 TARBP1Q13395 1621 aaKnown RBP15.32■□□□□ 0.04
UBP1-209ENST00000481761 TOPBP1Q92547 1522 aa15.31■□□□□ 0.04
UBP1-209ENST00000481761 AQRO60306 1485 aaKnown RBP eCLIP15.24■□□□□ 0.032e-7■■■■□ 25.1
UBP1-209ENST00000481761 TOP2AP11388 1531 aaKnown RBP15.22■□□□□ 0.03
UBP1-209ENST00000481761 ILDR1Q86SU0 546 aaPredicted RBP15.22■□□□□ 0.03
UBP1-209ENST00000481761 DNMBPQ6XZF7 1577 aa15.21■□□□□ 0.03
UBP1-209ENST00000481761 KIF13AQ9H1H9 1805 aa15.19■□□□□ 0.02
UBP1-209ENST00000481761 SYNJ1O43426 1573 aa15.15■□□□□ 0.02
UBP1-209ENST00000481761 ABCC8Q09428 1581 aa15.13■□□□□ 0.01
UBP1-209ENST00000481761 FBLN2P98095 1184 aa15.12■□□□□ 0.01
UBP1-209ENST00000481761 POLA1P09884 1462 aaPredicted RBP15.11■□□□□ 0.01
UBP1-209ENST00000481761 SNAPC4Q5SXM2 1469 aa15.11■□□□□ 0.01
UBP1-209ENST00000481761 GAPVD1Q14C86 1478 aa15.1■□□□□ 0.01
UBP1-209ENST00000481761 WDR97A6NE52 1622 aa15.06■□□□□ 0
UBP1-209ENST00000481761 ERCC6L2Q5T890 1561 aa15.04■□□□□ -0
UBP1-209ENST00000481761 MAGI1Q96QZ7 1491 aaPredicted RBP15.03■□□□□ -0
UBP1-209ENST00000481761 RAD54L2Q9Y4B4 1467 aa15.03■□□□□ -0
UBP1-209ENST00000481761 CCDC88BA6NC98 1476 aa15.01□□□□□ -0.01
UBP1-209ENST00000481761 PBRM1Q86U86 1689 aa15□□□□□ -0.01
UBP1-209ENST00000481761 TDRD9Q8NDG6 1382 aaKnown RBP14.98□□□□□ -0.01
UBP1-209ENST00000481761 SYNJ2O15056 1496 aa14.98□□□□□ -0.01
UBP1-209ENST00000481761 KDM4FA0A1W2PPD8 638 aa14.95□□□□□ -0.02
UBP1-209ENST00000481761 GRIN2BQ13224 1484 aa14.92□□□□□ -0.02
UBP1-209ENST00000481761 CHIC1Q5VXU3 224 aa14.91□□□□□ -0.02
UBP1-209ENST00000481761 SOGA1O94964 1423 aa14.91□□□□□ -0.02
UBP1-209ENST00000481761 CHMP7Q8WUX9 453 aaPredicted RBP14.9□□□□□ -0.02
UBP1-209ENST00000481761 FGD5Q6ZNL6 1462 aa14.89□□□□□ -0.03
UBP1-209ENST00000481761 SHROOM2Q13796 1616 aa14.89□□□□□ -0.03
UBP1-209ENST00000481761 CEP170Q5SW79 1584 aa14.89□□□□□ -0.03
UBP1-209ENST00000481761 KDM6BO15054 1643 aa14.86□□□□□ -0.03
UBP1-209ENST00000481761 DIP2BQ9P265 1576 aa14.85□□□□□ -0.03
UBP1-209ENST00000481761 ABCA5Q8WWZ7 1642 aa14.84□□□□□ -0.03
UBP1-209ENST00000481761 HECW2Q9P2P5 1572 aa14.81□□□□□ -0.04
UBP1-209ENST00000481761 CUX1P39880 1505 aa14.81□□□□□ -0.04
UBP1-209ENST00000481761 ABCC10Q5T3U5 1492 aa14.8□□□□□ -0.04
UBP1-209ENST00000481761 TSPOAP1O95153 1857 aa14.8□□□□□ -0.04
UBP1-209ENST00000481761 GRIN2AQ12879 1464 aa14.77□□□□□ -0.04
UBP1-209ENST00000481761 MAPKBP1O60336 1514 aa14.76□□□□□ -0.05
UBP1-209ENST00000481761 NUP160Q12769 1436 aa14.76□□□□□ -0.05
UBP1-209ENST00000481761 ADAMTS12P58397 1594 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 300 ms