RNA–Protein interactions for RNA: ENST00000481467.3

RN7SL338P-201, Transcript of RNA, 7SL, cytoplasmic 338, pseudogene, humanhuman

BASIC

Gene RN7SL338P, Length 293 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL338P-201ENST00000481467 NISCHQ9Y2I1 1504 aa19.61■□□□□ 0.73
RN7SL338P-201ENST00000481467 CCDC180Q9P1Z9 1646 aa17.64■□□□□ 0.41
RN7SL338P-201ENST00000481467 ABCC9O60706 1549 aa17.56■□□□□ 0.4
RN7SL338P-201ENST00000481467 RB1CC1Q8TDY2 1594 aa16.72■□□□□ 0.27
RN7SL338P-201ENST00000481467 NACADO15069 1562 aa16.62■□□□□ 0.25
RN7SL338P-201ENST00000481467 UNC13AQ9UPW8 1703 aa16.45■□□□□ 0.22
RN7SL338P-201ENST00000481467 DNAJC5BQ9UF47 199 aa16.45■□□□□ 0.22
RN7SL338P-201ENST00000481467 MYO15BQ96JP2 1530 aa16.4■□□□□ 0.22
RN7SL338P-201ENST00000481467 DCAF8L2P0C7V8 631 aa16.4■□□□□ 0.22
RN7SL338P-201ENST00000481467 BICRAQ9NZM4 1560 aa16.31■□□□□ 0.2
RN7SL338P-201ENST00000481467 PABPN1Q86U42 306 aaKnown RBP eCLIP16.3■□□□□ 0.2
RN7SL338P-201ENST00000481467 ZCCHC6Q5VYS8 1495 aaKnown RBP16.29■□□□□ 0.2
RN7SL338P-201ENST00000481467 DCAF1Q9Y4B6 1507 aa16.21■□□□□ 0.19
RN7SL338P-201ENST00000481467 AEBP2Q6ZN18 517 aaPredicted RBP16.1■□□□□ 0.17
RN7SL338P-201ENST00000481467 SCRIBQ14160 1630 aa16.05■□□□□ 0.16
RN7SL338P-201ENST00000481467 SHROOM4Q9ULL8 1493 aa16.03■□□□□ 0.16
RN7SL338P-201ENST00000481467 CC2D2AQ9P2K1 1620 aa15.9■□□□□ 0.14
RN7SL338P-201ENST00000481467 EIF4G1Q04637 1599 aaKnown RBP15.87■□□□□ 0.13
RN7SL338P-201ENST00000481467 CECR2Q9BXF3 1484 aa15.8■□□□□ 0.12
RN7SL338P-201ENST00000481467 NCAPD3P42695 1498 aa15.33■□□□□ 0.05
RN7SL338P-201ENST00000481467 SMARCA4P51532 1647 aa15.33■□□□□ 0.04
RN7SL338P-201ENST00000481467 ATAD2BQ9ULI0 1458 aa15.3■□□□□ 0.04
RN7SL338P-201ENST00000481467 HMGXB3Q12766 1538 aa15.25■□□□□ 0.03
RN7SL338P-201ENST00000481467 SMARCA2P51531 1590 aa15.24■□□□□ 0.03
RN7SL338P-201ENST00000481467 BAZ1AQ9NRL2 1556 aaPredicted RBP15.22■□□□□ 0.03
RN7SL338P-201ENST00000481467 CHIC1Q5VXU3 224 aa15.18■□□□□ 0.02
RN7SL338P-201ENST00000481467 PEG3Q9GZU2 1588 aa15.18■□□□□ 0.02
RN7SL338P-201ENST00000481467 MROH2BQ7Z745 1585 aa15.13■□□□□ 0.01
RN7SL338P-201ENST00000481467 BAZ1BQ9UIG0 1483 aaKnown RBP15.13■□□□□ 0.01
RN7SL338P-201ENST00000481467 NESP48681 1621 aa15.12■□□□□ 0.01
RN7SL338P-201ENST00000481467 CUX2O14529 1486 aa15.12■□□□□ 0.01
RN7SL338P-201ENST00000481467 ERCC6Q03468 1493 aa15.11■□□□□ 0.01
RN7SL338P-201ENST00000481467 DNAJC5Q9H3Z4 198 aa15.03■□□□□ -0
RN7SL338P-201ENST00000481467 THOC2Q8NI27 1593 aaKnown RBP15.01□□□□□ -0.01
RN7SL338P-201ENST00000481467 LAMC3Q9Y6N6 1575 aa15.01□□□□□ -0.01
RN7SL338P-201ENST00000481467 WIZO95785 1651 aa14.97□□□□□ -0.01
RN7SL338P-201ENST00000481467 KIF21AQ7Z4S6 1674 aa14.96□□□□□ -0.01
RN7SL338P-201ENST00000481467 PDS5BQ9NTI5 1447 aa14.85□□□□□ -0.03
RN7SL338P-201ENST00000481467 CADPSQ9ULU8 1353 aa14.84□□□□□ -0.03
RN7SL338P-201ENST00000481467 RSF1Q96T23 1441 aaPredicted RBP14.79□□□□□ -0.04
RN7SL338P-201ENST00000481467 MRC2Q9UBG0 1479 aa14.77□□□□□ -0.04
RN7SL338P-201ENST00000481467 WDR62O43379 1518 aa14.76□□□□□ -0.05
RN7SL338P-201ENST00000481467 TOP2AP11388 1531 aaKnown RBP14.76□□□□□ -0.05
RN7SL338P-201ENST00000481467 CFTRP13569 1480 aa14.71□□□□□ -0.05
RN7SL338P-201ENST00000481467 CEP164Q9UPV0 1460 aa14.71□□□□□ -0.05
RN7SL338P-201ENST00000481467 FANCD2Q9BXW9 1451 aa14.69□□□□□ -0.06
RN7SL338P-201ENST00000481467 PRDM2Q13029 1718 aa14.64□□□□□ -0.07
RN7SL338P-201ENST00000481467 URB2Q14146 1524 aaKnown RBP14.61□□□□□ -0.07
RN7SL338P-201ENST00000481467 CCDC88BA6NC98 1476 aa14.57□□□□□ -0.08
RN7SL338P-201ENST00000481467 TOPBP1Q92547 1522 aa14.44□□□□□ -0.1
RN7SL338P-201ENST00000481467 ZNF608Q9ULD9 1512 aaPredicted RBP14.41□□□□□ -0.1
RN7SL338P-201ENST00000481467 DNMBPQ6XZF7 1577 aa14.4□□□□□ -0.1
RN7SL338P-201ENST00000481467 IFT140Q96RY7 1462 aa14.4□□□□□ -0.1
RN7SL338P-201ENST00000481467 EIF4G3O43432 1585 aaKnown RBP14.37□□□□□ -0.11
RN7SL338P-201ENST00000481467 TRIM41Q8WV44 630 aa14.36□□□□□ -0.11
RN7SL338P-201ENST00000481467 ABCC8Q09428 1581 aa14.35□□□□□ -0.11
RN7SL338P-201ENST00000481467 TARBP1Q13395 1621 aaKnown RBP14.35□□□□□ -0.11
RN7SL338P-201ENST00000481467 OSCARQ8IYS5 282 aa14.34□□□□□ -0.11
RN7SL338P-201ENST00000481467 POLA1P09884 1462 aaPredicted RBP14.3□□□□□ -0.12
RN7SL338P-201ENST00000481467 RIMBP3CA6NJZ7 1639 aa14.29□□□□□ -0.12
RN7SL338P-201ENST00000481467 RIMBP3BA6NNM3 1639 aa14.29□□□□□ -0.12
RN7SL338P-201ENST00000481467 RIMBP3Q9UFD9 1639 aa14.29□□□□□ -0.12
RN7SL338P-201ENST00000481467 CHD1O14646 1710 aa14.27□□□□□ -0.13
RN7SL338P-201ENST00000481467 AQRO60306 1485 aaKnown RBP eCLIP14.25□□□□□ -0.13
RN7SL338P-201ENST00000481467 RAD54L2Q9Y4B4 1467 aa14.24□□□□□ -0.13
RN7SL338P-201ENST00000481467 ARHGEF11O15085 1522 aa14.22□□□□□ -0.13
RN7SL338P-201ENST00000481467 CUX1P39880 1505 aa14.22□□□□□ -0.13
RN7SL338P-201ENST00000481467 FGD5Q6ZNL6 1462 aa14.2□□□□□ -0.14
RN7SL338P-201ENST00000481467 WDR97A6NE52 1622 aa14.19□□□□□ -0.14
RN7SL338P-201ENST00000481467 SOGA1O94964 1423 aa14.18□□□□□ -0.14
RN7SL338P-201ENST00000481467 TDRD9Q8NDG6 1382 aaKnown RBP14.15□□□□□ -0.14
RN7SL338P-201ENST00000481467 SNAPC4Q5SXM2 1469 aa14.13□□□□□ -0.15
RN7SL338P-201ENST00000481467 PBRM1Q86U86 1689 aa14.1□□□□□ -0.15
RN7SL338P-201ENST00000481467 ARAP1Q96P48 1450 aa14.1□□□□□ -0.15
RN7SL338P-201ENST00000481467 CLASP1Q7Z460 1538 aa14.1□□□□□ -0.15
RN7SL338P-201ENST00000481467 MAGI1Q96QZ7 1491 aaPredicted RBP14.08□□□□□ -0.16
RN7SL338P-201ENST00000481467 ABCA5Q8WWZ7 1642 aa14.08□□□□□ -0.16
RN7SL338P-201ENST00000481467 GRIN2BQ13224 1484 aa14.07□□□□□ -0.16
RN7SL338P-201ENST00000481467 FBLN2P98095 1184 aa14.07□□□□□ -0.16
RN7SL338P-201ENST00000481467 SUPT5HO00267 1087 aaKnown RBP14.06□□□□□ -0.16
RN7SL338P-201ENST00000481467 ABCA10Q8WWZ4 1543 aa14.04□□□□□ -0.16
RN7SL338P-201ENST00000481467 SYNJ1O43426 1573 aa14.04□□□□□ -0.16
RN7SL338P-201ENST00000481467 SYNJ2O15056 1496 aa14.03□□□□□ -0.16
RN7SL338P-201ENST00000481467 GAPVD1Q14C86 1478 aa14.03□□□□□ -0.16
RN7SL338P-201ENST00000481467 BIVM-ERCC5R4GMW8 1640 aa14.02□□□□□ -0.16
RN7SL338P-201ENST00000481467 CYB5RLQ6IPT4 315 aa14.02□□□□□ -0.17
RN7SL338P-201ENST00000481467 TOP2BQ02880 1626 aa13.99□□□□□ -0.17
RN7SL338P-201ENST00000481467 CHMP7Q8WUX9 453 aaPredicted RBP13.97□□□□□ -0.17
RN7SL338P-201ENST00000481467 ADAMTS12P58397 1594 aa13.96□□□□□ -0.18
RN7SL338P-201ENST00000481467 WRNQ14191 1432 aaPredicted RBP eCLIP13.93□□□□□ -0.18
RN7SL338P-201ENST00000481467 GRIN2AQ12879 1464 aa13.92□□□□□ -0.18
RN7SL338P-201ENST00000481467 CEP170Q5SW79 1584 aa13.91□□□□□ -0.18
RN7SL338P-201ENST00000481467 ERCC6L2Q5T890 1561 aa13.89□□□□□ -0.19
RN7SL338P-201ENST00000481467 SENP3Q9H4L4 574 aaPredicted RBP13.89□□□□□ -0.19
RN7SL338P-201ENST00000481467 NUP160Q12769 1436 aa13.87□□□□□ -0.19
RN7SL338P-201ENST00000481467 ERICH3Q5RHP9 1530 aa13.86□□□□□ -0.19
RN7SL338P-201ENST00000481467 SHROOM2Q13796 1616 aa13.86□□□□□ -0.19
RN7SL338P-201ENST00000481467 FHAD1B1AJZ9 1412 aa13.84□□□□□ -0.19
RN7SL338P-201ENST00000481467 TRHP20396 242 aaPredicted RBP13.82□□□□□ -0.2
RN7SL338P-201ENST00000481467 RUSC2Q8N2Y8 1516 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms