RNA–Protein interactions for RNA: ENST00000481266.1

CDK5RAP2-214, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 5

Gene CDK5RAP2, Length 970 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-214ENST00000481266 NISCHQ9Y2I1 1504 aa51.03■■■■■ 5.76
CDK5RAP2-214ENST00000481266 ABCC9O60706 1549 aa46.18■■■■■ 4.98
CDK5RAP2-214ENST00000481266 CCDC180Q9P1Z9 1646 aa45.74■■■■■ 4.91
CDK5RAP2-214ENST00000481266 RB1CC1Q8TDY2 1594 aa43.77■■■■■ 4.6
CDK5RAP2-214ENST00000481266 DNAJC5BQ9UF47 199 aa43.72■■■■■ 4.59
CDK5RAP2-214ENST00000481266 NACADO15069 1562 aa43.43■■■■■ 4.54
CDK5RAP2-214ENST00000481266 DCAF8L2P0C7V8 631 aa43.42■■■■■ 4.54
CDK5RAP2-214ENST00000481266 PABPN1Q86U42 306 aaKnown RBP eCLIP43.09■■■■■ 4.49
CDK5RAP2-214ENST00000481266 MYO15BQ96JP2 1530 aa42.76■■■■■ 4.44
CDK5RAP2-214ENST00000481266 UNC13AQ9UPW8 1703 aa42.62■■■■■ 4.41
CDK5RAP2-214ENST00000481266 BICRAQ9NZM4 1560 aa42.5■■■■■ 4.39
CDK5RAP2-214ENST00000481266 ZCCHC6Q5VYS8 1495 aaKnown RBP42.18■■■■■ 4.34
CDK5RAP2-214ENST00000481266 DCAF1Q9Y4B6 1507 aa42.11■■■■■ 4.33
CDK5RAP2-214ENST00000481266 SHROOM4Q9ULL8 1493 aa41.9■■■■■ 4.3
CDK5RAP2-214ENST00000481266 SCRIBQ14160 1630 aa41.73■■■■■ 4.27
CDK5RAP2-214ENST00000481266 CECR2Q9BXF3 1484 aa41.65■■■■■ 4.26
CDK5RAP2-214ENST00000481266 CC2D2AQ9P2K1 1620 aa41.64■■■■■ 4.26
CDK5RAP2-214ENST00000481266 EIF4G1Q04637 1599 aaKnown RBP41.49■■■■■ 4.23
CDK5RAP2-214ENST00000481266 DNAJC5Q9H3Z4 198 aa40.35■■■■■ 4.05
CDK5RAP2-214ENST00000481266 NCAPD3P42695 1498 aa40.19■■■■■ 4.03
CDK5RAP2-214ENST00000481266 ATAD2BQ9ULI0 1458 aa40■■■■□ 3.99
CDK5RAP2-214ENST00000481266 ERCC6Q03468 1493 aa39.89■■■■□ 3.98
CDK5RAP2-214ENST00000481266 CUX2O14529 1486 aa39.88■■■■□ 3.98
CDK5RAP2-214ENST00000481266 SMARCA2P51531 1590 aa39.81■■■■□ 3.96
CDK5RAP2-214ENST00000481266 SMARCA4P51532 1647 aa39.78■■■■□ 3.96
CDK5RAP2-214ENST00000481266 HMGXB3Q12766 1538 aa39.73■■■■□ 3.95
CDK5RAP2-214ENST00000481266 BAZ1AQ9NRL2 1556 aaPredicted RBP39.59■■■■□ 3.93
CDK5RAP2-214ENST00000481266 NESP48681 1621 aa39.59■■■■□ 3.93
CDK5RAP2-214ENST00000481266 BAZ1BQ9UIG0 1483 aaKnown RBP39.56■■■■□ 3.92
CDK5RAP2-214ENST00000481266 PEG3Q9GZU2 1588 aa39.42■■■■□ 3.9
CDK5RAP2-214ENST00000481266 MROH2BQ7Z745 1585 aa39.31■■■■□ 3.88
CDK5RAP2-214ENST00000481266 LAMC3Q9Y6N6 1575 aa39.21■■■■□ 3.87
CDK5RAP2-214ENST00000481266 PDS5BQ9NTI5 1447 aa39.12■■■■□ 3.85
CDK5RAP2-214ENST00000481266 THOC2Q8NI27 1593 aaKnown RBP39.11■■■■□ 3.85
CDK5RAP2-214ENST00000481266 CADPSQ9ULU8 1353 aa38.99■■■■□ 3.83
CDK5RAP2-214ENST00000481266 KIF21AQ7Z4S6 1674 aa38.91■■■■□ 3.82
CDK5RAP2-214ENST00000481266 WIZO95785 1651 aa38.77■■■■□ 3.8
CDK5RAP2-214ENST00000481266 MRC2Q9UBG0 1479 aa38.72■■■■□ 3.79
CDK5RAP2-214ENST00000481266 WDR62O43379 1518 aa38.58■■■■□ 3.77
CDK5RAP2-214ENST00000481266 CEP164Q9UPV0 1460 aa38.5■■■■□ 3.75
CDK5RAP2-214ENST00000481266 FANCD2Q9BXW9 1451 aa38.47■■■■□ 3.75
CDK5RAP2-214ENST00000481266 RSF1Q96T23 1441 aaPredicted RBP38.47■■■■□ 3.75
CDK5RAP2-214ENST00000481266 TRIM41Q8WV44 630 aa38.44■■■■□ 3.74
CDK5RAP2-214ENST00000481266 CFTRP13569 1480 aa38.43■■■■□ 3.74
CDK5RAP2-214ENST00000481266 TOP2AP11388 1531 aaKnown RBP38.27■■■■□ 3.72
CDK5RAP2-214ENST00000481266 OSCARQ8IYS5 282 aa38.21■■■■□ 3.71
CDK5RAP2-214ENST00000481266 URB2Q14146 1524 aaKnown RBP38.15■■■■□ 3.7
CDK5RAP2-214ENST00000481266 CCDC88BA6NC98 1476 aa37.95■■■■□ 3.67
CDK5RAP2-214ENST00000481266 IFT140Q96RY7 1462 aa37.78■■■■□ 3.64
CDK5RAP2-214ENST00000481266 ZNF608Q9ULD9 1512 aaPredicted RBP37.75■■■■□ 3.63
CDK5RAP2-214ENST00000481266 PRDM2Q13029 1718 aa37.74■■■■□ 3.63
CDK5RAP2-214ENST00000481266 TOPBP1Q92547 1522 aa37.69■■■■□ 3.62
CDK5RAP2-214ENST00000481266 ABCC8Q09428 1581 aa37.63■■■■□ 3.62
CDK5RAP2-214ENST00000481266 RIMBP3CA6NJZ7 1639 aa37.5■■■■□ 3.59
CDK5RAP2-214ENST00000481266 RIMBP3BA6NNM3 1639 aa37.5■■■■□ 3.59
CDK5RAP2-214ENST00000481266 RIMBP3Q9UFD9 1639 aa37.5■■■■□ 3.59
CDK5RAP2-214ENST00000481266 DNMBPQ6XZF7 1577 aa37.48■■■■□ 3.59
CDK5RAP2-214ENST00000481266 AQRO60306 1485 aaKnown RBP eCLIP37.43■■■■□ 3.581e-6■■■■■ 42.1
CDK5RAP2-214ENST00000481266 ARHGEF11O15085 1522 aa37.4■■■■□ 3.58
CDK5RAP2-214ENST00000481266 EIF4G3O43432 1585 aaKnown RBP37.39■■■■□ 3.58
CDK5RAP2-214ENST00000481266 CYB5RLQ6IPT4 315 aa37.34■■■■□ 3.57
CDK5RAP2-214ENST00000481266 FBLN2P98095 1184 aa37.32■■■■□ 3.56
CDK5RAP2-214ENST00000481266 TARBP1Q13395 1621 aaKnown RBP37.32■■■■□ 3.56
CDK5RAP2-214ENST00000481266 POLA1P09884 1462 aaPredicted RBP37.29■■■■□ 3.56
CDK5RAP2-214ENST00000481266 SOGA1O94964 1423 aa37.22■■■■□ 3.55
CDK5RAP2-214ENST00000481266 RAD54L2Q9Y4B4 1467 aa37.21■■■■□ 3.55
CDK5RAP2-214ENST00000481266 TDRD9Q8NDG6 1382 aaKnown RBP37.19■■■■□ 3.54
CDK5RAP2-214ENST00000481266 CHD1O14646 1710 aa37.12■■■■□ 3.53
CDK5RAP2-214ENST00000481266 ARAP1Q96P48 1450 aa37.02■■■■□ 3.52
CDK5RAP2-214ENST00000481266 FGD5Q6ZNL6 1462 aa37.01■■■■□ 3.52
CDK5RAP2-214ENST00000481266 CHMP7Q8WUX9 453 aaPredicted RBP37.01■■■■□ 3.52
CDK5RAP2-214ENST00000481266 TRHP20396 242 aaPredicted RBP37■■■■□ 3.51
CDK5RAP2-214ENST00000481266 SNAPC4Q5SXM2 1469 aa36.95■■■■□ 3.51
CDK5RAP2-214ENST00000481266 CUX1P39880 1505 aa36.93■■■■□ 3.5
CDK5RAP2-214ENST00000481266 WDR97A6NE52 1622 aa36.89■■■■□ 3.5
CDK5RAP2-214ENST00000481266 GRIN2BQ13224 1484 aa36.86■■■■□ 3.49
CDK5RAP2-214ENST00000481266 MAGI1Q96QZ7 1491 aaPredicted RBP36.85■■■■□ 3.49
CDK5RAP2-214ENST00000481266 CLASP1Q7Z460 1538 aa36.79■■■■□ 3.48
CDK5RAP2-214ENST00000481266 SYNJ2O15056 1496 aa36.75■■■■□ 3.47
CDK5RAP2-214ENST00000481266 SYNJ1O43426 1573 aa36.74■■■■□ 3.47
CDK5RAP2-214ENST00000481266 GAPVD1Q14C86 1478 aa36.69■■■■□ 3.46
CDK5RAP2-214ENST00000481266 SUPT5HO00267 1087 aaKnown RBP36.68■■■■□ 3.46
CDK5RAP2-214ENST00000481266 ABCA10Q8WWZ4 1543 aa36.59■■■■□ 3.45
CDK5RAP2-214ENST00000481266 PBRM1Q86U86 1689 aa36.49■■■■□ 3.43
CDK5RAP2-214ENST00000481266 WRNQ14191 1432 aaPredicted RBP eCLIP36.46■■■■□ 3.43
CDK5RAP2-214ENST00000481266 ABCA5Q8WWZ7 1642 aa36.45■■■■□ 3.43
CDK5RAP2-214ENST00000481266 GRIN2AQ12879 1464 aa36.35■■■■□ 3.41
CDK5RAP2-214ENST00000481266 NUP160Q12769 1436 aa36.26■■■■□ 3.4
CDK5RAP2-214ENST00000481266 FHAD1B1AJZ9 1412 aa36.24■■■■□ 3.39
CDK5RAP2-214ENST00000481266 TOP2BQ02880 1626 aa36.23■■■■□ 3.39
CDK5RAP2-214ENST00000481266 ERCC6L2Q5T890 1561 aa36.22■■■■□ 3.39
CDK5RAP2-214ENST00000481266 ADAMTS12P58397 1594 aa36.2■■■■□ 3.39
CDK5RAP2-214ENST00000481266 CEP170Q5SW79 1584 aa36.19■■■■□ 3.38
CDK5RAP2-214ENST00000481266 BIVM-ERCC5R4GMW8 1640 aa36.18■■■■□ 3.38
CDK5RAP2-214ENST00000481266 AEBP2Q6ZN18 517 aaPredicted RBP36.11■■■■□ 3.37
CDK5RAP2-214ENST00000481266 ERICH3Q5RHP9 1530 aa36.11■■■■□ 3.37
CDK5RAP2-214ENST00000481266 JPH4Q96JJ6 628 aa36.05■■■■□ 3.36
CDK5RAP2-214ENST00000481266 SHROOM2Q13796 1616 aa36.03■■■■□ 3.36
CDK5RAP2-214ENST00000481266 PRG4Q92954 1404 aaPredicted RBP35.99■■■■□ 3.35
CDK5RAP2-214ENST00000481266 NPM1P06748 294 aaKnown RBP eCLIP35.79■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms