RNA–Protein interactions for RNA: ENST00000481168.1

RPN1-204, Transcript of ribophorin I, humanhuman

TSL 2

Gene RPN1, Length 751 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-204ENST00000481168 NISCHQ9Y2I1 1504 aa32.8■■■□□ 2.84
RPN1-204ENST00000481168 ABCC9O60706 1549 aa30.87■■■□□ 2.53
RPN1-204ENST00000481168 DNAJC5BQ9UF47 199 aa29.86■■■□□ 2.37
RPN1-204ENST00000481168 CCDC180Q9P1Z9 1646 aa29.73■■■□□ 2.35
RPN1-204ENST00000481168 RB1CC1Q8TDY2 1594 aa28.86■■■□□ 2.21
RPN1-204ENST00000481168 PABPN1Q86U42 306 aaKnown RBP eCLIP28.68■■■□□ 2.18
RPN1-204ENST00000481168 NACADO15069 1562 aa28.42■■■□□ 2.14
RPN1-204ENST00000481168 DCAF8L2P0C7V8 631 aa28.35■■■□□ 2.13
RPN1-204ENST00000481168 DNAJC5Q9H3Z4 198 aa28.11■■■□□ 2.09
RPN1-204ENST00000481168 UNC13AQ9UPW8 1703 aa28.09■■■□□ 2.09
RPN1-204ENST00000481168 BICRAQ9NZM4 1560 aa28.03■■■□□ 2.08
RPN1-204ENST00000481168 CECR2Q9BXF3 1484 aa27.89■■■□□ 2.06
RPN1-204ENST00000481168 CC2D2AQ9P2K1 1620 aa27.75■■■□□ 2.03
RPN1-204ENST00000481168 MYO15BQ96JP2 1530 aa27.67■■■□□ 2.02
RPN1-204ENST00000481168 SHROOM4Q9ULL8 1493 aa27.52■■■□□ 2
RPN1-204ENST00000481168 EIF4G1Q04637 1599 aaKnown RBP27.44■■□□□ 1.98
RPN1-204ENST00000481168 SCRIBQ14160 1630 aa27.15■■□□□ 1.94
RPN1-204ENST00000481168 DCAF1Q9Y4B6 1507 aa26.97■■□□□ 1.91
RPN1-204ENST00000481168 ZCCHC6Q5VYS8 1495 aaKnown RBP26.95■■□□□ 1.91
RPN1-204ENST00000481168 CUX2O14529 1486 aa26.93■■□□□ 1.9
RPN1-204ENST00000481168 ERCC6Q03468 1493 aa26.74■■□□□ 1.87
RPN1-204ENST00000481168 TRIM41Q8WV44 630 aa26.57■■□□□ 1.84
RPN1-204ENST00000481168 NCAPD3P42695 1498 aa26.29■■□□□ 1.8
RPN1-204ENST00000481168 NESP48681 1621 aa26.22■■□□□ 1.79
RPN1-204ENST00000481168 ATAD2BQ9ULI0 1458 aa26.09■■□□□ 1.77
RPN1-204ENST00000481168 THOC2Q8NI27 1593 aaKnown RBP26.03■■□□□ 1.76
RPN1-204ENST00000481168 HMGXB3Q12766 1538 aa25.94■■□□□ 1.74
RPN1-204ENST00000481168 SMARCA2P51531 1590 aa25.92■■□□□ 1.74
RPN1-204ENST00000481168 LAMC3Q9Y6N6 1575 aa25.79■■□□□ 1.72
RPN1-204ENST00000481168 BAZ1BQ9UIG0 1483 aaKnown RBP25.79■■□□□ 1.72
RPN1-204ENST00000481168 PDS5BQ9NTI5 1447 aa25.78■■□□□ 1.72
RPN1-204ENST00000481168 SMARCA4P51532 1647 aa25.75■■□□□ 1.71
RPN1-204ENST00000481168 KIF21AQ7Z4S6 1674 aa25.74■■□□□ 1.71
RPN1-204ENST00000481168 OSCARQ8IYS5 282 aa25.67■■□□□ 1.7
RPN1-204ENST00000481168 BAZ1AQ9NRL2 1556 aaPredicted RBP25.58■■□□□ 1.69
RPN1-204ENST00000481168 MRC2Q9UBG0 1479 aa25.58■■□□□ 1.69
RPN1-204ENST00000481168 WDR62O43379 1518 aa25.49■■□□□ 1.67
RPN1-204ENST00000481168 CADPSQ9ULU8 1353 aa25.49■■□□□ 1.67
RPN1-204ENST00000481168 PEG3Q9GZU2 1588 aa25.47■■□□□ 1.67
RPN1-204ENST00000481168 RIMBP3CA6NJZ7 1639 aa25.3■■□□□ 1.64
RPN1-204ENST00000481168 RIMBP3BA6NNM3 1639 aa25.3■■□□□ 1.64
RPN1-204ENST00000481168 RIMBP3Q9UFD9 1639 aa25.3■■□□□ 1.64
RPN1-204ENST00000481168 CEP164Q9UPV0 1460 aa25.28■■□□□ 1.64
RPN1-204ENST00000481168 MROH2BQ7Z745 1585 aa25.28■■□□□ 1.64
RPN1-204ENST00000481168 TRHP20396 242 aaPredicted RBP25.23■■□□□ 1.63
RPN1-204ENST00000481168 AEBP2Q6ZN18 517 aaPredicted RBP25.22■■□□□ 1.63
RPN1-204ENST00000481168 FANCD2Q9BXW9 1451 aa25.19■■□□□ 1.62
RPN1-204ENST00000481168 CYB5RLQ6IPT4 315 aa25.17■■□□□ 1.62
RPN1-204ENST00000481168 ARHGEF11O15085 1522 aa25.15■■□□□ 1.62
RPN1-204ENST00000481168 URB2Q14146 1524 aaKnown RBP25.02■■□□□ 1.6
RPN1-204ENST00000481168 CFTRP13569 1480 aa24.96■■□□□ 1.59
RPN1-204ENST00000481168 WIZO95785 1651 aa24.9■■□□□ 1.58
RPN1-204ENST00000481168 ZNF608Q9ULD9 1512 aaPredicted RBP24.9■■□□□ 1.58
RPN1-204ENST00000481168 ARAP1Q96P48 1450 aa24.84■■□□□ 1.57
RPN1-204ENST00000481168 IFT140Q96RY7 1462 aa24.83■■□□□ 1.56
RPN1-204ENST00000481168 FBLN2P98095 1184 aa24.73■■□□□ 1.55
RPN1-204ENST00000481168 RSF1Q96T23 1441 aaPredicted RBP24.67■■□□□ 1.54
RPN1-204ENST00000481168 EIF4G3O43432 1585 aaKnown RBP24.63■■□□□ 1.53
RPN1-204ENST00000481168 CHD1O14646 1710 aa24.6■■□□□ 1.53
RPN1-204ENST00000481168 AQRO60306 1485 aaKnown RBP eCLIP24.58■■□□□ 1.537e-7■■■□□ 17.9
RPN1-204ENST00000481168 TOPBP1Q92547 1522 aa24.58■■□□□ 1.53
RPN1-204ENST00000481168 TOP2AP11388 1531 aaKnown RBP24.51■■□□□ 1.51
RPN1-204ENST00000481168 ABCC8Q09428 1581 aa24.46■■□□□ 1.51
RPN1-204ENST00000481168 PRDM2Q13029 1718 aa24.45■■□□□ 1.5
RPN1-204ENST00000481168 TARBP1Q13395 1621 aaKnown RBP24.38■■□□□ 1.49
RPN1-204ENST00000481168 DNMBPQ6XZF7 1577 aa24.37■■□□□ 1.49
RPN1-204ENST00000481168 CHMP7Q8WUX9 453 aaPredicted RBP24.35■■□□□ 1.49
RPN1-204ENST00000481168 CLASP1Q7Z460 1538 aa24.32■■□□□ 1.48
RPN1-204ENST00000481168 CCDC88BA6NC98 1476 aa24.32■■□□□ 1.48
RPN1-204ENST00000481168 TDRD9Q8NDG6 1382 aaKnown RBP24.31■■□□□ 1.48
RPN1-204ENST00000481168 POLA1P09884 1462 aaPredicted RBP24.27■■□□□ 1.48
RPN1-204ENST00000481168 SNAPC4Q5SXM2 1469 aa24.26■■□□□ 1.47
RPN1-204ENST00000481168 RAD54L2Q9Y4B4 1467 aa24.26■■□□□ 1.47
RPN1-204ENST00000481168 SYNJ1O43426 1573 aa24.25■■□□□ 1.47
RPN1-204ENST00000481168 GAPVD1Q14C86 1478 aa24.23■■□□□ 1.47
RPN1-204ENST00000481168 ILDR1Q86SU0 546 aaPredicted RBP24.21■■□□□ 1.47
RPN1-204ENST00000481168 SOGA1O94964 1423 aa24.2■■□□□ 1.46
RPN1-204ENST00000481168 MAGI1Q96QZ7 1491 aaPredicted RBP24.13■■□□□ 1.45
RPN1-204ENST00000481168 SYNJ2O15056 1496 aa24.08■■□□□ 1.45
RPN1-204ENST00000481168 GRIN2BQ13224 1484 aa24.07■■□□□ 1.44
RPN1-204ENST00000481168 WDR97A6NE52 1622 aa24.02■■□□□ 1.44
RPN1-204ENST00000481168 FGD5Q6ZNL6 1462 aa23.99■■□□□ 1.43
RPN1-204ENST00000481168 ERCC6L2Q5T890 1561 aa23.92■■□□□ 1.42
RPN1-204ENST00000481168 KDM4FA0A1W2PPD8 638 aa23.91■■□□□ 1.42
RPN1-204ENST00000481168 FAM69CQ0P6D2 419 aa23.83■■□□□ 1.41
RPN1-204ENST00000481168 KIF13AQ9H1H9 1805 aa23.82■■□□□ 1.4
RPN1-204ENST00000481168 CUX1P39880 1505 aa23.8■■□□□ 1.4
RPN1-204ENST00000481168 PBRM1Q86U86 1689 aa23.78■■□□□ 1.4
RPN1-204ENST00000481168 CEP170Q5SW79 1584 aa23.78■■□□□ 1.4
RPN1-204ENST00000481168 GRIN2AQ12879 1464 aa23.74■■□□□ 1.39
RPN1-204ENST00000481168 ABCC10Q5T3U5 1492 aa23.68■■□□□ 1.38
RPN1-204ENST00000481168 NUP160Q12769 1436 aa23.68■■□□□ 1.38
RPN1-204ENST00000481168 NPM1P06748 294 aaKnown RBP eCLIP23.68■■□□□ 1.38
RPN1-204ENST00000481168 ABCA10Q8WWZ4 1543 aa23.64■■□□□ 1.38
RPN1-204ENST00000481168 ABCA5Q8WWZ7 1642 aa23.63■■□□□ 1.37
RPN1-204ENST00000481168 KDM6BO15054 1643 aa23.62■■□□□ 1.37
RPN1-204ENST00000481168 SHROOM2Q13796 1616 aa23.61■■□□□ 1.37
RPN1-204ENST00000481168 PRG4Q92954 1404 aaPredicted RBP23.6■■□□□ 1.37
RPN1-204ENST00000481168 JPH4Q96JJ6 628 aa23.55■■□□□ 1.36
RPN1-204ENST00000481168 ADAMTS12P58397 1594 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms