RNA–Protein interactions for RNA: ENST00000481143.2

DMD-225, Transcript of dystrophin, humanhuman

TSL 3

Gene DMD, Length 621 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-225ENST00000481143 NISCHQ9Y2I1 1504 aa23.49■■□□□ 1.35
DMD-225ENST00000481143 CCDC180Q9P1Z9 1646 aa21■□□□□ 0.95
DMD-225ENST00000481143 ABCC9O60706 1549 aa20.46■□□□□ 0.87
DMD-225ENST00000481143 RB1CC1Q8TDY2 1594 aa19.76■□□□□ 0.75
DMD-225ENST00000481143 NACADO15069 1562 aa19.72■□□□□ 0.75
DMD-225ENST00000481143 DCAF8L2P0C7V8 631 aa19.6■□□□□ 0.73
DMD-225ENST00000481143 MYO15BQ96JP2 1530 aa19.59■□□□□ 0.73
DMD-225ENST00000481143 ZCCHC6Q5VYS8 1495 aaKnown RBP19.57■□□□□ 0.72
DMD-225ENST00000481143 DCAF1Q9Y4B6 1507 aa19.48■□□□□ 0.71
DMD-225ENST00000481143 AEBP2Q6ZN18 517 aaPredicted RBP19.44■□□□□ 0.7
DMD-225ENST00000481143 UNC13AQ9UPW8 1703 aa19.29■□□□□ 0.68
DMD-225ENST00000481143 SCRIBQ14160 1630 aa19.08■□□□□ 0.65
DMD-225ENST00000481143 BICRAQ9NZM4 1560 aa19.06■□□□□ 0.64
DMD-225ENST00000481143 PABPN1Q86U42 306 aaKnown RBP eCLIP19.06■□□□□ 0.64
DMD-225ENST00000481143 SHROOM4Q9ULL8 1493 aa19■□□□□ 0.63
DMD-225ENST00000481143 DNAJC5BQ9UF47 199 aa18.69■□□□□ 0.58
DMD-225ENST00000481143 EIF4G1Q04637 1599 aaKnown RBP18.62■□□□□ 0.57
DMD-225ENST00000481143 CC2D2AQ9P2K1 1620 aa18.55■□□□□ 0.56
DMD-225ENST00000481143 CHIC1Q5VXU3 224 aa18.5■□□□□ 0.55
DMD-225ENST00000481143 CECR2Q9BXF3 1484 aa18.42■□□□□ 0.54
DMD-225ENST00000481143 SMARCA4P51532 1647 aa18.27■□□□□ 0.51
DMD-225ENST00000481143 BAZ1AQ9NRL2 1556 aaPredicted RBP18.26■□□□□ 0.51
DMD-225ENST00000481143 SMARCA2P51531 1590 aa18.19■□□□□ 0.5
DMD-225ENST00000481143 NCAPD3P42695 1498 aa18.14■□□□□ 0.49
DMD-225ENST00000481143 ATAD2BQ9ULI0 1458 aa18.14■□□□□ 0.49
DMD-225ENST00000481143 HMGXB3Q12766 1538 aa18.11■□□□□ 0.49
DMD-225ENST00000481143 PEG3Q9GZU2 1588 aa18.09■□□□□ 0.49
DMD-225ENST00000481143 MROH2BQ7Z745 1585 aa18.06■□□□□ 0.48
DMD-225ENST00000481143 BAZ1BQ9UIG0 1483 aaKnown RBP18.03■□□□□ 0.48
DMD-225ENST00000481143 WIZO95785 1651 aa17.9■□□□□ 0.46
DMD-225ENST00000481143 RSF1Q96T23 1441 aaPredicted RBP17.84■□□□□ 0.45
DMD-225ENST00000481143 TOP2AP11388 1531 aaKnown RBP17.74■□□□□ 0.43
DMD-225ENST00000481143 LAMC3Q9Y6N6 1575 aa17.74■□□□□ 0.43
DMD-225ENST00000481143 ERCC6Q03468 1493 aa17.72■□□□□ 0.43
DMD-225ENST00000481143 NESP48681 1621 aa17.66■□□□□ 0.42
DMD-225ENST00000481143 CADPSQ9ULU8 1353 aa17.61■□□□□ 0.41
DMD-225ENST00000481143 PDS5BQ9NTI5 1447 aa17.6■□□□□ 0.41
DMD-225ENST00000481143 CUX2O14529 1486 aa17.55■□□□□ 0.4
DMD-225ENST00000481143 KIF21AQ7Z4S6 1674 aa17.55■□□□□ 0.4
DMD-225ENST00000481143 CFTRP13569 1480 aa17.5■□□□□ 0.39
DMD-225ENST00000481143 PRDM2Q13029 1718 aa17.49■□□□□ 0.39
DMD-225ENST00000481143 THOC2Q8NI27 1593 aaKnown RBP17.49■□□□□ 0.39
DMD-225ENST00000481143 CCDC88BA6NC98 1476 aa17.47■□□□□ 0.39
DMD-225ENST00000481143 CEP164Q9UPV0 1460 aa17.44■□□□□ 0.38
DMD-225ENST00000481143 FANCD2Q9BXW9 1451 aa17.43■□□□□ 0.38
DMD-225ENST00000481143 MRC2Q9UBG0 1479 aa17.41■□□□□ 0.38
DMD-225ENST00000481143 SUPT5HO00267 1087 aaKnown RBP17.35■□□□□ 0.37
DMD-225ENST00000481143 WDR62O43379 1518 aa17.35■□□□□ 0.37
DMD-225ENST00000481143 URB2Q14146 1524 aaKnown RBP17.21■□□□□ 0.35
DMD-225ENST00000481143 ABCC8Q09428 1581 aa17.2■□□□□ 0.34
DMD-225ENST00000481143 DNMBPQ6XZF7 1577 aa17.15■□□□□ 0.34
DMD-225ENST00000481143 TOPBP1Q92547 1522 aa17.13■□□□□ 0.33
DMD-225ENST00000481143 IFT140Q96RY7 1462 aa17.06■□□□□ 0.32
DMD-225ENST00000481143 POLA1P09884 1462 aaPredicted RBP16.98■□□□□ 0.31
DMD-225ENST00000481143 CUX1P39880 1505 aa16.96■□□□□ 0.31
DMD-225ENST00000481143 DNAJC5Q9H3Z4 198 aa16.96■□□□□ 0.31
DMD-225ENST00000481143 TARBP1Q13395 1621 aaKnown RBP16.95■□□□□ 0.3
DMD-225ENST00000481143 FGD5Q6ZNL6 1462 aa16.93■□□□□ 0.3
DMD-225ENST00000481143 EIF4G3O43432 1585 aaKnown RBP16.93■□□□□ 0.3
DMD-225ENST00000481143 WDR97A6NE52 1622 aa16.92■□□□□ 0.3
DMD-225ENST00000481143 ZNF608Q9ULD9 1512 aaPredicted RBP16.91■□□□□ 0.3
DMD-225ENST00000481143 SOGA1O94964 1423 aa16.9■□□□□ 0.3
DMD-225ENST00000481143 WRNQ14191 1432 aaPredicted RBP eCLIP16.87■□□□□ 0.29
DMD-225ENST00000481143 BIVM-ERCC5R4GMW8 1640 aa16.87■□□□□ 0.29
DMD-225ENST00000481143 RAD54L2Q9Y4B4 1467 aa16.86■□□□□ 0.29
DMD-225ENST00000481143 TOP2BQ02880 1626 aa16.86■□□□□ 0.29
DMD-225ENST00000481143 AQRO60306 1485 aaKnown RBP eCLIP16.81■□□□□ 0.28
DMD-225ENST00000481143 SYNJ1O43426 1573 aa16.81■□□□□ 0.28
DMD-225ENST00000481143 ABCA10Q8WWZ4 1543 aa16.79■□□□□ 0.28
DMD-225ENST00000481143 TDRD9Q8NDG6 1382 aaKnown RBP16.77■□□□□ 0.28
DMD-225ENST00000481143 OSCARQ8IYS5 282 aa16.76■□□□□ 0.27
DMD-225ENST00000481143 PBRM1Q86U86 1689 aa16.75■□□□□ 0.27
DMD-225ENST00000481143 SENP3Q9H4L4 574 aaPredicted RBP16.75■□□□□ 0.27
DMD-225ENST00000481143 GRIN2BQ13224 1484 aa16.74■□□□□ 0.27
DMD-225ENST00000481143 CHD1O14646 1710 aa16.73■□□□□ 0.27
DMD-225ENST00000481143 ABCA5Q8WWZ7 1642 aa16.73■□□□□ 0.27
DMD-225ENST00000481143 GAPVD1Q14C86 1478 aa16.73■□□□□ 0.27
DMD-225ENST00000481143 MAGI1Q96QZ7 1491 aaPredicted RBP16.73■□□□□ 0.27
DMD-225ENST00000481143 SNAPC4Q5SXM2 1469 aa16.71■□□□□ 0.27
DMD-225ENST00000481143 FBLN2P98095 1184 aa16.66■□□□□ 0.26
DMD-225ENST00000481143 SYNJ2O15056 1496 aa16.65■□□□□ 0.26
DMD-225ENST00000481143 CHMP7Q8WUX9 453 aaPredicted RBP16.62■□□□□ 0.25
DMD-225ENST00000481143 ERICH3Q5RHP9 1530 aa16.61■□□□□ 0.25
DMD-225ENST00000481143 ADAMTS12P58397 1594 aa16.59■□□□□ 0.25
DMD-225ENST00000481143 FHAD1B1AJZ9 1412 aa16.54■□□□□ 0.24
DMD-225ENST00000481143 KIF27Q86VH2 1401 aa16.54■□□□□ 0.24
DMD-225ENST00000481143 GRIN2AQ12879 1464 aa16.52■□□□□ 0.23
DMD-225ENST00000481143 RIMBP3CA6NJZ7 1639 aa16.52■□□□□ 0.23
DMD-225ENST00000481143 RIMBP3BA6NNM3 1639 aa16.52■□□□□ 0.23
DMD-225ENST00000481143 RIMBP3Q9UFD9 1639 aa16.52■□□□□ 0.23
DMD-225ENST00000481143 CLASP1Q7Z460 1538 aa16.51■□□□□ 0.23
DMD-225ENST00000481143 ARHGEF11O15085 1522 aa16.5■□□□□ 0.23
DMD-225ENST00000481143 CUL7Q14999 1698 aa16.5■□□□□ 0.23
DMD-225ENST00000481143 PHF23Q9BUL5 403 aaPredicted RBP16.47■□□□□ 0.23
DMD-225ENST00000481143 NUP160Q12769 1436 aa16.44■□□□□ 0.22
DMD-225ENST00000481143 TRIM41Q8WV44 630 aa16.43■□□□□ 0.22
DMD-225ENST00000481143 CEP170Q5SW79 1584 aa16.43■□□□□ 0.22
DMD-225ENST00000481143 IGF1RP08069 1367 aa16.4■□□□□ 0.22
DMD-225ENST00000481143 CARMIL1Q5VZK9 1371 aa16.35■□□□□ 0.21
DMD-225ENST00000481143 ARAP1Q96P48 1450 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms