RNA–Protein interactions for RNA: ENST00000480645.1

PLXNA3-204, Transcript of plexin A3, humanhuman

TSL 3

Gene PLXNA3, Length 160 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-204ENST00000480645 NISCHQ9Y2I1 1504 aa22.83■■□□□ 1.25
PLXNA3-204ENST00000480645 CCDC180Q9P1Z9 1646 aa19.94■□□□□ 0.78
PLXNA3-204ENST00000480645 ZCCHC6Q5VYS8 1495 aaKnown RBP19.27■□□□□ 0.67
PLXNA3-204ENST00000480645 DCAF1Q9Y4B6 1507 aa18.98■□□□□ 0.63
PLXNA3-204ENST00000480645 MYO15BQ96JP2 1530 aa18.73■□□□□ 0.59
PLXNA3-204ENST00000480645 DCAF8L2P0C7V8 631 aa18.57■□□□□ 0.56
PLXNA3-204ENST00000480645 SHROOM4Q9ULL8 1493 aa18.55■□□□□ 0.56
PLXNA3-204ENST00000480645 ABCC9O60706 1549 aa18.54■□□□□ 0.56
PLXNA3-204ENST00000480645 NACADO15069 1562 aa18.5■□□□□ 0.55
PLXNA3-204ENST00000480645 RB1CC1Q8TDY2 1594 aa18.3■□□□□ 0.52
PLXNA3-204ENST00000480645 SCRIBQ14160 1630 aa18.23■□□□□ 0.51
PLXNA3-204ENST00000480645 SUPT5HO00267 1087 aaKnown RBP17.91■□□□□ 0.46
PLXNA3-204ENST00000480645 UNC13AQ9UPW8 1703 aa17.82■□□□□ 0.44
PLXNA3-204ENST00000480645 RSF1Q96T23 1441 aaPredicted RBP17.73■□□□□ 0.43
PLXNA3-204ENST00000480645 BICRAQ9NZM4 1560 aa17.67■□□□□ 0.42
PLXNA3-204ENST00000480645 BAZ1AQ9NRL2 1556 aaPredicted RBP17.66■□□□□ 0.42
PLXNA3-204ENST00000480645 CECR2Q9BXF3 1484 aa17.64■□□□□ 0.41
PLXNA3-204ENST00000480645 MROH2BQ7Z745 1585 aa17.59■□□□□ 0.41
PLXNA3-204ENST00000480645 SMARCA4P51532 1647 aa17.54■□□□□ 0.4
PLXNA3-204ENST00000480645 WIZO95785 1651 aa17.44■□□□□ 0.38
PLXNA3-204ENST00000480645 PABPN1Q86U42 306 aaKnown RBP eCLIP17.42■□□□□ 0.38
PLXNA3-204ENST00000480645 TOP2AP11388 1531 aaKnown RBP17.38■□□□□ 0.37
PLXNA3-204ENST00000480645 PEG3Q9GZU2 1588 aa17.37■□□□□ 0.37
PLXNA3-204ENST00000480645 CHIC1Q5VXU3 224 aa17.27■□□□□ 0.36
PLXNA3-204ENST00000480645 SMARCA2P51531 1590 aa17.24■□□□□ 0.35
PLXNA3-204ENST00000480645 ATAD2BQ9ULI0 1458 aa17.18■□□□□ 0.34
PLXNA3-204ENST00000480645 EIF4G1Q04637 1599 aaKnown RBP17.15■□□□□ 0.34
PLXNA3-204ENST00000480645 BAZ1BQ9UIG0 1483 aaKnown RBP17.12■□□□□ 0.33
PLXNA3-204ENST00000480645 CCDC88BA6NC98 1476 aa17.11■□□□□ 0.33
PLXNA3-204ENST00000480645 HMGXB3Q12766 1538 aa17.09■□□□□ 0.33
PLXNA3-204ENST00000480645 NCAPD3P42695 1498 aa17.04■□□□□ 0.32
PLXNA3-204ENST00000480645 TRIM41Q8WV44 630 aa16.9■□□□□ 0.3
PLXNA3-204ENST00000480645 CC2D2AQ9P2K1 1620 aa16.83■□□□□ 0.28
PLXNA3-204ENST00000480645 ABCC8Q09428 1581 aa16.77■□□□□ 0.28
PLXNA3-204ENST00000480645 WRNQ14191 1432 aaPredicted RBP eCLIP16.72■□□□□ 0.27
PLXNA3-204ENST00000480645 CFTRP13569 1480 aa16.69■□□□□ 0.26
PLXNA3-204ENST00000480645 PRDM2Q13029 1718 aa16.65■□□□□ 0.26
PLXNA3-204ENST00000480645 EEA1Q15075 1411 aa16.65■□□□□ 0.26
PLXNA3-204ENST00000480645 SYNJ1O43426 1573 aa16.62■□□□□ 0.25
PLXNA3-204ENST00000480645 TOP2BQ02880 1626 aa16.59■□□□□ 0.25
PLXNA3-204ENST00000480645 BIVM-ERCC5R4GMW8 1640 aa16.59■□□□□ 0.25
PLXNA3-204ENST00000480645 CADPSQ9ULU8 1353 aa16.58■□□□□ 0.24
PLXNA3-204ENST00000480645 LOC105371045A0A1W2PR82 267 aa16.51■□□□□ 0.23
PLXNA3-204ENST00000480645 FAM9AQ8IZU1 332 aaPredicted RBP16.49■□□□□ 0.23
PLXNA3-204ENST00000480645 SOGA1O94964 1423 aa16.47■□□□□ 0.23
PLXNA3-204ENST00000480645 LAMC3Q9Y6N6 1575 aa16.47■□□□□ 0.23
PLXNA3-204ENST00000480645 CUX1P39880 1505 aa16.46■□□□□ 0.23
PLXNA3-204ENST00000480645 FANCD2Q9BXW9 1451 aa16.4■□□□□ 0.22
PLXNA3-204ENST00000480645 KIF21BO75037 1637 aa16.39■□□□□ 0.21
PLXNA3-204ENST00000480645 GOLGA3Q08378 1498 aa16.37■□□□□ 0.21
PLXNA3-204ENST00000480645 CSRNP3Q8WYN3 585 aa16.37■□□□□ 0.21
PLXNA3-204ENST00000480645 CEP164Q9UPV0 1460 aa16.36■□□□□ 0.21
PLXNA3-204ENST00000480645 RUSC2Q8N2Y8 1516 aa16.36■□□□□ 0.21
PLXNA3-204ENST00000480645 DNMBPQ6XZF7 1577 aa16.34■□□□□ 0.21
PLXNA3-204ENST00000480645 TNIKQ9UKE5 1360 aa16.31■□□□□ 0.2
PLXNA3-204ENST00000480645 NESP48681 1621 aa16.3■□□□□ 0.2
PLXNA3-204ENST00000480645 PDS5BQ9NTI5 1447 aa16.3■□□□□ 0.2
PLXNA3-204ENST00000480645 KIF27Q86VH2 1401 aa16.29■□□□□ 0.2
PLXNA3-204ENST00000480645 FGD5Q6ZNL6 1462 aa16.28■□□□□ 0.2
PLXNA3-204ENST00000480645 ERICH3Q5RHP9 1530 aa16.27■□□□□ 0.2
PLXNA3-204ENST00000480645 TOPBP1Q92547 1522 aa16.24■□□□□ 0.19
PLXNA3-204ENST00000480645 PRXQ9BXM0 1461 aa16.22■□□□□ 0.19
PLXNA3-204ENST00000480645 CEP162Q5TB80 1403 aa16.22■□□□□ 0.19
PLXNA3-204ENST00000480645 CUX2O14529 1486 aa16.18■□□□□ 0.18
PLXNA3-204ENST00000480645 POLA1P09884 1462 aaPredicted RBP16.18■□□□□ 0.18
PLXNA3-204ENST00000480645 EHMT2Q96KQ7 1210 aa16.18■□□□□ 0.18
PLXNA3-204ENST00000480645 ABCA10Q8WWZ4 1543 aa16.18■□□□□ 0.18
PLXNA3-204ENST00000480645 RAPGEF2Q9Y4G8 1499 aa16.17■□□□□ 0.18
PLXNA3-204ENST00000480645 URB2Q14146 1524 aaKnown RBP16.17■□□□□ 0.18
PLXNA3-204ENST00000480645 KIF21AQ7Z4S6 1674 aa16.16■□□□□ 0.18
PLXNA3-204ENST00000480645 UBTFP17480 764 aaKnown RBP16.14■□□□□ 0.17
PLXNA3-204ENST00000480645 DNAJC5BQ9UF47 199 aa16.14■□□□□ 0.17
PLXNA3-204ENST00000480645 WDR97A6NE52 1622 aa16.12■□□□□ 0.17
PLXNA3-204ENST00000480645 MRC2Q9UBG0 1479 aa16.1■□□□□ 0.17
PLXNA3-204ENST00000480645 CLIP1P30622 1438 aa16.07■□□□□ 0.16
PLXNA3-204ENST00000480645 IGF1RP08069 1367 aa16.06■□□□□ 0.16
PLXNA3-204ENST00000480645 CUL7Q14999 1698 aa16.05■□□□□ 0.16
PLXNA3-204ENST00000480645 RAD54L2Q9Y4B4 1467 aa16.05■□□□□ 0.16
PLXNA3-204ENST00000480645 ABCA5Q8WWZ7 1642 aa16.05■□□□□ 0.16
PLXNA3-204ENST00000480645 WDR62O43379 1518 aa16.03■□□□□ 0.16
PLXNA3-204ENST00000480645 TRIM26Q12899 539 aaPredicted RBP16.02■□□□□ 0.16
PLXNA3-204ENST00000480645 CARMIL1Q5VZK9 1371 aa16■□□□□ 0.15
PLXNA3-204ENST00000480645 TARBP1Q13395 1621 aaKnown RBP15.99■□□□□ 0.15
PLXNA3-204ENST00000480645 VPS8Q8N3P4 1428 aa15.98■□□□□ 0.15
PLXNA3-204ENST00000480645 PCGF6Q9BYE7 350 aa15.96■□□□□ 0.15
PLXNA3-204ENST00000480645 GAPVD1Q14C86 1478 aa15.95■□□□□ 0.14
PLXNA3-204ENST00000480645 ERCC6Q03468 1493 aa15.94■□□□□ 0.14
PLXNA3-204ENST00000480645 IFT140Q96RY7 1462 aa15.94■□□□□ 0.14
PLXNA3-204ENST00000480645 THOC2Q8NI27 1593 aaKnown RBP15.92■□□□□ 0.14
PLXNA3-204ENST00000480645 ARAP1Q96P48 1450 aa15.89■□□□□ 0.13
PLXNA3-204ENST00000480645 TDRD9Q8NDG6 1382 aaKnown RBP15.87■□□□□ 0.13
PLXNA3-204ENST00000480645 PBRM1Q86U86 1689 aa15.86■□□□□ 0.13
PLXNA3-204ENST00000480645 CTTNBP2Q8WZ74 1663 aa15.86■□□□□ 0.13
PLXNA3-204ENST00000480645 ARHGAP35Q9NRY4 1499 aa15.85■□□□□ 0.13
PLXNA3-204ENST00000480645 EFCAB5A4FU69 1503 aa15.85■□□□□ 0.13
PLXNA3-204ENST00000480645 GRIN2BQ13224 1484 aa15.84■□□□□ 0.13
PLXNA3-204ENST00000480645 ADAMTS12P58397 1594 aa15.83■□□□□ 0.13
PLXNA3-204ENST00000480645 FHAD1B1AJZ9 1412 aa15.81■□□□□ 0.12
PLXNA3-204ENST00000480645 EIF4G3O43432 1585 aaKnown RBP15.77■□□□□ 0.11
PLXNA3-204ENST00000480645 APLP2Q06481 763 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms