RNA–Protein interactions for RNA: ENST00000480617.1

CNKSR1-205, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-205ENST00000480617 NISCHQ9Y2I1 1504 aa19.1■□□□□ 0.65
CNKSR1-205ENST00000480617 ABCC9O60706 1549 aa17.68■□□□□ 0.42
CNKSR1-205ENST00000480617 CCDC180Q9P1Z9 1646 aa17.22■□□□□ 0.35
CNKSR1-205ENST00000480617 DNAJC5BQ9UF47 199 aa17.14■□□□□ 0.33
CNKSR1-205ENST00000480617 RB1CC1Q8TDY2 1594 aa16.64■□□□□ 0.25
CNKSR1-205ENST00000480617 PABPN1Q86U42 306 aaKnown RBP eCLIP16.46■□□□□ 0.23
CNKSR1-205ENST00000480617 NACADO15069 1562 aa16.46■□□□□ 0.23
CNKSR1-205ENST00000480617 DCAF8L2P0C7V8 631 aa16.3■□□□□ 0.2
CNKSR1-205ENST00000480617 BICRAQ9NZM4 1560 aa16.21■□□□□ 0.18
CNKSR1-205ENST00000480617 UNC13AQ9UPW8 1703 aa16.18■□□□□ 0.18
CNKSR1-205ENST00000480617 MYO15BQ96JP2 1530 aa16.16■□□□□ 0.18
CNKSR1-205ENST00000480617 DNAJC5Q9H3Z4 198 aa16.05■□□□□ 0.16
CNKSR1-205ENST00000480617 AEBP2Q6ZN18 517 aaPredicted RBP16.02■□□□□ 0.16
CNKSR1-205ENST00000480617 CECR2Q9BXF3 1484 aa16■□□□□ 0.15
CNKSR1-205ENST00000480617 SHROOM4Q9ULL8 1493 aa15.96■□□□□ 0.14
CNKSR1-205ENST00000480617 CC2D2AQ9P2K1 1620 aa15.94■□□□□ 0.14
CNKSR1-205ENST00000480617 EIF4G1Q04637 1599 aaKnown RBP15.81■□□□□ 0.12
CNKSR1-205ENST00000480617 DCAF1Q9Y4B6 1507 aa15.78■□□□□ 0.12
CNKSR1-205ENST00000480617 CHIC1Q5VXU3 224 aa15.73■□□□□ 0.11
CNKSR1-205ENST00000480617 ZCCHC6Q5VYS8 1495 aaKnown RBP15.7■□□□□ 0.1
CNKSR1-205ENST00000480617 SCRIBQ14160 1630 aa15.62■□□□□ 0.09
CNKSR1-205ENST00000480617 CUX2O14529 1486 aa15.44■□□□□ 0.06
CNKSR1-205ENST00000480617 NCAPD3P42695 1498 aa15.27■□□□□ 0.04
CNKSR1-205ENST00000480617 ERCC6Q03468 1493 aa15.26■□□□□ 0.03
CNKSR1-205ENST00000480617 ATAD2BQ9ULI0 1458 aa15.13■□□□□ 0.01
CNKSR1-205ENST00000480617 NESP48681 1621 aa15.08■□□□□ 0
CNKSR1-205ENST00000480617 TRIM41Q8WV44 630 aa15.02■□□□□ -0
CNKSR1-205ENST00000480617 HMGXB3Q12766 1538 aa15.02□□□□□ -0.01
CNKSR1-205ENST00000480617 SMARCA2P51531 1590 aa15□□□□□ -0.01
CNKSR1-205ENST00000480617 THOC2Q8NI27 1593 aaKnown RBP14.96□□□□□ -0.01
CNKSR1-205ENST00000480617 SMARCA4P51532 1647 aa14.92□□□□□ -0.02
CNKSR1-205ENST00000480617 LAMC3Q9Y6N6 1575 aa14.9□□□□□ -0.02
CNKSR1-205ENST00000480617 BAZ1BQ9UIG0 1483 aaKnown RBP14.89□□□□□ -0.03
CNKSR1-205ENST00000480617 PDS5BQ9NTI5 1447 aa14.87□□□□□ -0.03
CNKSR1-205ENST00000480617 PEG3Q9GZU2 1588 aa14.85□□□□□ -0.03
CNKSR1-205ENST00000480617 BAZ1AQ9NRL2 1556 aaPredicted RBP14.81□□□□□ -0.04
CNKSR1-205ENST00000480617 CADPSQ9ULU8 1353 aa14.78□□□□□ -0.04
CNKSR1-205ENST00000480617 KIF21AQ7Z4S6 1674 aa14.77□□□□□ -0.04
CNKSR1-205ENST00000480617 OSCARQ8IYS5 282 aa14.76□□□□□ -0.05
CNKSR1-205ENST00000480617 MRC2Q9UBG0 1479 aa14.72□□□□□ -0.05
CNKSR1-205ENST00000480617 WDR62O43379 1518 aa14.7□□□□□ -0.06
CNKSR1-205ENST00000480617 MROH2BQ7Z745 1585 aa14.69□□□□□ -0.06
CNKSR1-205ENST00000480617 CEP164Q9UPV0 1460 aa14.56□□□□□ -0.08
CNKSR1-205ENST00000480617 FANCD2Q9BXW9 1451 aa14.54□□□□□ -0.08
CNKSR1-205ENST00000480617 CFTRP13569 1480 aa14.5□□□□□ -0.09
CNKSR1-205ENST00000480617 RIMBP3CA6NJZ7 1639 aa14.47□□□□□ -0.09
CNKSR1-205ENST00000480617 RIMBP3BA6NNM3 1639 aa14.47□□□□□ -0.09
CNKSR1-205ENST00000480617 RIMBP3Q9UFD9 1639 aa14.47□□□□□ -0.09
CNKSR1-205ENST00000480617 URB2Q14146 1524 aaKnown RBP14.46□□□□□ -0.1
CNKSR1-205ENST00000480617 WIZO95785 1651 aa14.44□□□□□ -0.1
CNKSR1-205ENST00000480617 CYB5RLQ6IPT4 315 aa14.41□□□□□ -0.1
CNKSR1-205ENST00000480617 ARHGEF11O15085 1522 aa14.41□□□□□ -0.1
CNKSR1-205ENST00000480617 ZNF608Q9ULD9 1512 aaPredicted RBP14.35□□□□□ -0.11
CNKSR1-205ENST00000480617 IFT140Q96RY7 1462 aa14.33□□□□□ -0.12
CNKSR1-205ENST00000480617 TRHP20396 242 aaPredicted RBP14.33□□□□□ -0.12
CNKSR1-205ENST00000480617 RSF1Q96T23 1441 aaPredicted RBP14.28□□□□□ -0.12
CNKSR1-205ENST00000480617 ARAP1Q96P48 1450 aa14.25□□□□□ -0.13
CNKSR1-205ENST00000480617 TOP2AP11388 1531 aaKnown RBP14.24□□□□□ -0.13
CNKSR1-205ENST00000480617 TOPBP1Q92547 1522 aa14.22□□□□□ -0.13
CNKSR1-205ENST00000480617 ABCC8Q09428 1581 aa14.2□□□□□ -0.14
CNKSR1-205ENST00000480617 AQRO60306 1485 aaKnown RBP eCLIP14.19□□□□□ -0.14
CNKSR1-205ENST00000480617 FBLN2P98095 1184 aa14.16□□□□□ -0.14
CNKSR1-205ENST00000480617 CCDC88BA6NC98 1476 aa14.16□□□□□ -0.14
CNKSR1-205ENST00000480617 EIF4G3O43432 1585 aaKnown RBP14.16□□□□□ -0.14
CNKSR1-205ENST00000480617 PRDM2Q13029 1718 aa14.12□□□□□ -0.15
CNKSR1-205ENST00000480617 TARBP1Q13395 1621 aaKnown RBP14.12□□□□□ -0.15
CNKSR1-205ENST00000480617 CHD1O14646 1710 aa14.1□□□□□ -0.15
CNKSR1-205ENST00000480617 DNMBPQ6XZF7 1577 aa14.09□□□□□ -0.15
CNKSR1-205ENST00000480617 TDRD9Q8NDG6 1382 aaKnown RBP14.05□□□□□ -0.16
CNKSR1-205ENST00000480617 POLA1P09884 1462 aaPredicted RBP14.05□□□□□ -0.16
CNKSR1-205ENST00000480617 CHMP7Q8WUX9 453 aaPredicted RBP14.03□□□□□ -0.16
CNKSR1-205ENST00000480617 CLASP1Q7Z460 1538 aa14.03□□□□□ -0.16
CNKSR1-205ENST00000480617 SOGA1O94964 1423 aa14.02□□□□□ -0.16
CNKSR1-205ENST00000480617 RAD54L2Q9Y4B4 1467 aa14.01□□□□□ -0.17
CNKSR1-205ENST00000480617 SNAPC4Q5SXM2 1469 aa13.96□□□□□ -0.17
CNKSR1-205ENST00000480617 MAGI1Q96QZ7 1491 aaPredicted RBP13.94□□□□□ -0.18
CNKSR1-205ENST00000480617 SYNJ1O43426 1573 aa13.94□□□□□ -0.18
CNKSR1-205ENST00000480617 WDR97A6NE52 1622 aa13.93□□□□□ -0.18
CNKSR1-205ENST00000480617 GAPVD1Q14C86 1478 aa13.93□□□□□ -0.18
CNKSR1-205ENST00000480617 GRIN2BQ13224 1484 aa13.92□□□□□ -0.18
CNKSR1-205ENST00000480617 SYNJ2O15056 1496 aa13.91□□□□□ -0.18
CNKSR1-205ENST00000480617 PHF23Q9BUL5 403 aaPredicted RBP13.9□□□□□ -0.18
CNKSR1-205ENST00000480617 FGD5Q6ZNL6 1462 aa13.87□□□□□ -0.19
CNKSR1-205ENST00000480617 CUX1P39880 1505 aa13.8□□□□□ -0.2
CNKSR1-205ENST00000480617 ERCC6L2Q5T890 1561 aa13.77□□□□□ -0.21
CNKSR1-205ENST00000480617 ABCA10Q8WWZ4 1543 aa13.74□□□□□ -0.21
CNKSR1-205ENST00000480617 NUP160Q12769 1436 aa13.73□□□□□ -0.21
CNKSR1-205ENST00000480617 GRIN2AQ12879 1464 aa13.72□□□□□ -0.21
CNKSR1-205ENST00000480617 KDM4FA0A1W2PPD8 638 aa13.71□□□□□ -0.21
CNKSR1-205ENST00000480617 CEP170Q5SW79 1584 aa13.71□□□□□ -0.22
CNKSR1-205ENST00000480617 ILDR1Q86SU0 546 aaPredicted RBP13.7□□□□□ -0.22
CNKSR1-205ENST00000480617 PBRM1Q86U86 1689 aa13.69□□□□□ -0.22
CNKSR1-205ENST00000480617 ABCA5Q8WWZ7 1642 aa13.69□□□□□ -0.22
CNKSR1-205ENST00000480617 FAM69CQ0P6D2 419 aa13.67□□□□□ -0.22
CNKSR1-205ENST00000480617 SHROOM2Q13796 1616 aa13.67□□□□□ -0.22
CNKSR1-205ENST00000480617 KIF13AQ9H1H9 1805 aa13.67□□□□□ -0.22
CNKSR1-205ENST00000480617 JPH4Q96JJ6 628 aa13.66□□□□□ -0.22
CNKSR1-205ENST00000480617 ABCC10Q5T3U5 1492 aa13.65□□□□□ -0.22
CNKSR1-205ENST00000480617 FHAD1B1AJZ9 1412 aa13.64□□□□□ -0.23
CNKSR1-205ENST00000480617 PRG4Q92954 1404 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms