RNA–Protein interactions for RNA: ENST00000480473.5

PCOLCE2-205, Transcript of procollagen C-endopeptidase enhancer 2, humanhuman

TSL 5

Gene PCOLCE2, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE2-205ENST00000480473 NISCHQ9Y2I1 1504 aa18.23■□□□□ 0.51
PCOLCE2-205ENST00000480473 AEBP2Q6ZN18 517 aaPredicted RBP17.57■□□□□ 0.4
PCOLCE2-205ENST00000480473 CHIC1Q5VXU3 224 aa17.49■□□□□ 0.39
PCOLCE2-205ENST00000480473 CCDC180Q9P1Z9 1646 aa16.35■□□□□ 0.21
PCOLCE2-205ENST00000480473 ABCC9O60706 1549 aa16.24■□□□□ 0.19
PCOLCE2-205ENST00000480473 RB1CC1Q8TDY2 1594 aa15.54■□□□□ 0.08
PCOLCE2-205ENST00000480473 PHF23Q9BUL5 403 aaPredicted RBP15.49■□□□□ 0.07
PCOLCE2-205ENST00000480473 NACADO15069 1562 aa15.47■□□□□ 0.07
PCOLCE2-205ENST00000480473 DCAF8L2P0C7V8 631 aa15.39■□□□□ 0.05
PCOLCE2-205ENST00000480473 MYO15BQ96JP2 1530 aa15.3■□□□□ 0.04
PCOLCE2-205ENST00000480473 DNAJC5BQ9UF47 199 aa15.23■□□□□ 0.03
PCOLCE2-205ENST00000480473 UNC13AQ9UPW8 1703 aa15.17■□□□□ 0.02
PCOLCE2-205ENST00000480473 PABPN1Q86U42 306 aaKnown RBP eCLIP15.15■□□□□ 0.02
PCOLCE2-205ENST00000480473 DCAF1Q9Y4B6 1507 aa15.1■□□□□ 0.01
PCOLCE2-205ENST00000480473 ZCCHC6Q5VYS8 1495 aaKnown RBP15.08■□□□□ 0.01
PCOLCE2-205ENST00000480473 BICRAQ9NZM4 1560 aa15.05■□□□□ -0
PCOLCE2-205ENST00000480473 SHROOM4Q9ULL8 1493 aa14.9□□□□□ -0.02
PCOLCE2-205ENST00000480473 SCRIBQ14160 1630 aa14.81□□□□□ -0.04
PCOLCE2-205ENST00000480473 SENP3Q9H4L4 574 aaPredicted RBP14.71□□□□□ -0.05
PCOLCE2-205ENST00000480473 CC2D2AQ9P2K1 1620 aa14.7□□□□□ -0.06
PCOLCE2-205ENST00000480473 EIF4G1Q04637 1599 aaKnown RBP14.68□□□□□ -0.06
PCOLCE2-205ENST00000480473 CECR2Q9BXF3 1484 aa14.65□□□□□ -0.06
PCOLCE2-205ENST00000480473 PLPPR3Q6T4P5 718 aa14.33□□□□□ -0.12
PCOLCE2-205ENST00000480473 NCAPD3P42695 1498 aa14.28□□□□□ -0.12
PCOLCE2-205ENST00000480473 ATAD2BQ9ULI0 1458 aa14.2□□□□□ -0.14
PCOLCE2-205ENST00000480473 SMARCA2P51531 1590 aa14.19□□□□□ -0.14
PCOLCE2-205ENST00000480473 SMARCA4P51532 1647 aa14.19□□□□□ -0.14
PCOLCE2-205ENST00000480473 BAZ1AQ9NRL2 1556 aaPredicted RBP14.15□□□□□ -0.14
PCOLCE2-205ENST00000480473 HMGXB3Q12766 1538 aa14.14□□□□□ -0.15
PCOLCE2-205ENST00000480473 PEG3Q9GZU2 1588 aa14.09□□□□□ -0.15
PCOLCE2-205ENST00000480473 BAZ1BQ9UIG0 1483 aaKnown RBP14.06□□□□□ -0.16
PCOLCE2-205ENST00000480473 CUX2O14529 1486 aa14.04□□□□□ -0.16
PCOLCE2-205ENST00000480473 ERCC6Q03468 1493 aa14.04□□□□□ -0.16
PCOLCE2-205ENST00000480473 DNAJC5Q9H3Z4 198 aa14.02□□□□□ -0.17
PCOLCE2-205ENST00000480473 MROH2BQ7Z745 1585 aa14.01□□□□□ -0.17
PCOLCE2-205ENST00000480473 NESP48681 1621 aa13.96□□□□□ -0.17
PCOLCE2-205ENST00000480473 LAMC3Q9Y6N6 1575 aa13.94□□□□□ -0.18
PCOLCE2-205ENST00000480473 PDS5BQ9NTI5 1447 aa13.88□□□□□ -0.19
PCOLCE2-205ENST00000480473 WIZO95785 1651 aa13.85□□□□□ -0.19
PCOLCE2-205ENST00000480473 CADPSQ9ULU8 1353 aa13.84□□□□□ -0.19
PCOLCE2-205ENST00000480473 THOC2Q8NI27 1593 aaKnown RBP13.81□□□□□ -0.2
PCOLCE2-205ENST00000480473 KIF21AQ7Z4S6 1674 aa13.8□□□□□ -0.2
PCOLCE2-205ENST00000480473 RSF1Q96T23 1441 aaPredicted RBP13.76□□□□□ -0.21
PCOLCE2-205ENST00000480473 MRC2Q9UBG0 1479 aa13.69□□□□□ -0.22
PCOLCE2-205ENST00000480473 FOXD1Q16676 465 aa13.69□□□□□ -0.22
PCOLCE2-205ENST00000480473 CFTRP13569 1480 aa13.68□□□□□ -0.22
PCOLCE2-205ENST00000480473 TOP2AP11388 1531 aaKnown RBP13.68□□□□□ -0.22
PCOLCE2-205ENST00000480473 CEP164Q9UPV0 1460 aa13.66□□□□□ -0.22
PCOLCE2-205ENST00000480473 WDR62O43379 1518 aa13.65□□□□□ -0.22
PCOLCE2-205ENST00000480473 FANCD2Q9BXW9 1451 aa13.65□□□□□ -0.22
PCOLCE2-205ENST00000480473 PRDM2Q13029 1718 aa13.56□□□□□ -0.24
PCOLCE2-205ENST00000480473 CCDC88BA6NC98 1476 aa13.55□□□□□ -0.24
PCOLCE2-205ENST00000480473 PPP6R1Q9UPN7 881 aa13.55□□□□□ -0.24
PCOLCE2-205ENST00000480473 ADRA2BP18089 450 aa13.54□□□□□ -0.24
PCOLCE2-205ENST00000480473 URB2Q14146 1524 aaKnown RBP13.51□□□□□ -0.25
PCOLCE2-205ENST00000480473 OSCARQ8IYS5 282 aa13.46□□□□□ -0.25
PCOLCE2-205ENST00000480473 ABCC8Q09428 1581 aa13.45□□□□□ -0.26
PCOLCE2-205ENST00000480473 IFT140Q96RY7 1462 aa13.4□□□□□ -0.26
PCOLCE2-205ENST00000480473 TOPBP1Q92547 1522 aa13.39□□□□□ -0.27
PCOLCE2-205ENST00000480473 TRIM41Q8WV44 630 aa13.35□□□□□ -0.27
PCOLCE2-205ENST00000480473 DNMBPQ6XZF7 1577 aa13.35□□□□□ -0.27
PCOLCE2-205ENST00000480473 ZNF608Q9ULD9 1512 aaPredicted RBP13.32□□□□□ -0.28
PCOLCE2-205ENST00000480473 TARBP1Q13395 1621 aaKnown RBP13.28□□□□□ -0.28
PCOLCE2-205ENST00000480473 EIF4G3O43432 1585 aaKnown RBP13.24□□□□□ -0.29
PCOLCE2-205ENST00000480473 AQRO60306 1485 aaKnown RBP eCLIP13.24□□□□□ -0.29
PCOLCE2-205ENST00000480473 POLA1P09884 1462 aaPredicted RBP13.24□□□□□ -0.29
PCOLCE2-205ENST00000480473 SOGA1O94964 1423 aa13.24□□□□□ -0.29
PCOLCE2-205ENST00000480473 RAD54L2Q9Y4B4 1467 aa13.19□□□□□ -0.3
PCOLCE2-205ENST00000480473 SUPT5HO00267 1087 aaKnown RBP13.19□□□□□ -0.3
PCOLCE2-205ENST00000480473 WDR97A6NE52 1622 aa13.19□□□□□ -0.3
PCOLCE2-205ENST00000480473 RIMBP3CA6NJZ7 1639 aa13.18□□□□□ -0.3
PCOLCE2-205ENST00000480473 RIMBP3BA6NNM3 1639 aa13.18□□□□□ -0.3
PCOLCE2-205ENST00000480473 RIMBP3Q9UFD9 1639 aa13.18□□□□□ -0.3
PCOLCE2-205ENST00000480473 FBLN2P98095 1184 aa13.17□□□□□ -0.3
PCOLCE2-205ENST00000480473 TDRD9Q8NDG6 1382 aaKnown RBP13.17□□□□□ -0.3
PCOLCE2-205ENST00000480473 FGD5Q6ZNL6 1462 aa13.16□□□□□ -0.3
PCOLCE2-205ENST00000480473 CHD1O14646 1710 aa13.16□□□□□ -0.3
PCOLCE2-205ENST00000480473 CUX1P39880 1505 aa13.16□□□□□ -0.3
PCOLCE2-205ENST00000480473 ARHGEF11O15085 1522 aa13.14□□□□□ -0.31
PCOLCE2-205ENST00000480473 CHMP7Q8WUX9 453 aaPredicted RBP13.11□□□□□ -0.31
PCOLCE2-205ENST00000480473 CYB5RLQ6IPT4 315 aa13.1□□□□□ -0.31
PCOLCE2-205ENST00000480473 GRIN2BQ13224 1484 aa13.1□□□□□ -0.31
PCOLCE2-205ENST00000480473 MAGI1Q96QZ7 1491 aaPredicted RBP13.1□□□□□ -0.31
PCOLCE2-205ENST00000480473 SNAPC4Q5SXM2 1469 aa13.07□□□□□ -0.32
PCOLCE2-205ENST00000480473 GAPVD1Q14C86 1478 aa13.06□□□□□ -0.32
PCOLCE2-205ENST00000480473 ABCA10Q8WWZ4 1543 aa13.05□□□□□ -0.32
PCOLCE2-205ENST00000480473 SYNJ2O15056 1496 aa13.04□□□□□ -0.32
PCOLCE2-205ENST00000480473 SYNJ1O43426 1573 aa13.04□□□□□ -0.32
PCOLCE2-205ENST00000480473 WRNQ14191 1432 aaPredicted RBP eCLIP13.03□□□□□ -0.32
PCOLCE2-205ENST00000480473 PBRM1Q86U86 1689 aa13.02□□□□□ -0.32
PCOLCE2-205ENST00000480473 CLASP1Q7Z460 1538 aa13.01□□□□□ -0.33
PCOLCE2-205ENST00000480473 ARAP1Q96P48 1450 aa13□□□□□ -0.33
PCOLCE2-205ENST00000480473 TOP2BQ02880 1626 aa12.99□□□□□ -0.33
PCOLCE2-205ENST00000480473 ABCA5Q8WWZ7 1642 aa12.99□□□□□ -0.33
PCOLCE2-205ENST00000480473 BIVM-ERCC5R4GMW8 1640 aa12.99□□□□□ -0.33
PCOLCE2-205ENST00000480473 PIAS4Q8N2W9 510 aaPredicted RBP12.96□□□□□ -0.33
PCOLCE2-205ENST00000480473 KCNA4P22459 653 aa12.95□□□□□ -0.34
PCOLCE2-205ENST00000480473 TRHP20396 242 aaPredicted RBP12.94□□□□□ -0.34
PCOLCE2-205ENST00000480473 GRIN2AQ12879 1464 aa12.91□□□□□ -0.34
PCOLCE2-205ENST00000480473 FHAD1B1AJZ9 1412 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 279.2 ms