RNA–Protein interactions for RNA: ENST00000480438.1

HUWE1-211, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene HUWE1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-211ENST00000480438 NISCHQ9Y2I1 1504 aa36.12■■■■□ 3.37
HUWE1-211ENST00000480438 ABCC9O60706 1549 aa33.92■■■■□ 3.02
HUWE1-211ENST00000480438 DNAJC5BQ9UF47 199 aa32.84■■■□□ 2.85
HUWE1-211ENST00000480438 CCDC180Q9P1Z9 1646 aa32.69■■■□□ 2.82
HUWE1-211ENST00000480438 RB1CC1Q8TDY2 1594 aa31.71■■■□□ 2.67
HUWE1-211ENST00000480438 PABPN1Q86U42 306 aaKnown RBP eCLIP31.53■■■□□ 2.64
HUWE1-211ENST00000480438 NACADO15069 1562 aa31.25■■■□□ 2.59
HUWE1-211ENST00000480438 DCAF8L2P0C7V8 631 aa31.17■■■□□ 2.58
HUWE1-211ENST00000480438 UNC13AQ9UPW8 1703 aa30.89■■■□□ 2.54
HUWE1-211ENST00000480438 DNAJC5Q9H3Z4 198 aa30.85■■■□□ 2.53
HUWE1-211ENST00000480438 BICRAQ9NZM4 1560 aa30.84■■■□□ 2.53
HUWE1-211ENST00000480438 CECR2Q9BXF3 1484 aa30.63■■■□□ 2.49
HUWE1-211ENST00000480438 CC2D2AQ9P2K1 1620 aa30.5■■■□□ 2.47
HUWE1-211ENST00000480438 MYO15BQ96JP2 1530 aa30.45■■■□□ 2.47
HUWE1-211ENST00000480438 SHROOM4Q9ULL8 1493 aa30.25■■■□□ 2.43
HUWE1-211ENST00000480438 EIF4G1Q04637 1599 aaKnown RBP30.17■■■□□ 2.42
HUWE1-211ENST00000480438 SCRIBQ14160 1630 aa29.86■■■□□ 2.37
HUWE1-211ENST00000480438 DCAF1Q9Y4B6 1507 aa29.7■■■□□ 2.34
HUWE1-211ENST00000480438 ZCCHC6Q5VYS8 1495 aaKnown RBP29.68■■■□□ 2.34
HUWE1-211ENST00000480438 CUX2O14529 1486 aa29.56■■■□□ 2.32
HUWE1-211ENST00000480438 ERCC6Q03468 1493 aa29.34■■■□□ 2.29
HUWE1-211ENST00000480438 TRIM41Q8WV44 630 aa29.13■■■□□ 2.25
HUWE1-211ENST00000480438 NCAPD3P42695 1498 aa28.93■■■□□ 2.22
HUWE1-211ENST00000480438 NESP48681 1621 aa28.84■■■□□ 2.21
HUWE1-211ENST00000480438 ATAD2BQ9ULI0 1458 aa28.71■■■□□ 2.19
HUWE1-211ENST00000480438 THOC2Q8NI27 1593 aaKnown RBP28.61■■■□□ 2.17
HUWE1-211ENST00000480438 HMGXB3Q12766 1538 aa28.53■■■□□ 2.16
HUWE1-211ENST00000480438 SMARCA2P51531 1590 aa28.5■■■□□ 2.15
HUWE1-211ENST00000480438 LAMC3Q9Y6N6 1575 aa28.36■■■□□ 2.13
HUWE1-211ENST00000480438 BAZ1BQ9UIG0 1483 aaKnown RBP28.35■■■□□ 2.13
HUWE1-211ENST00000480438 SMARCA4P51532 1647 aa28.34■■■□□ 2.13
HUWE1-211ENST00000480438 PDS5BQ9NTI5 1447 aa28.33■■■□□ 2.13
HUWE1-211ENST00000480438 KIF21AQ7Z4S6 1674 aa28.29■■■□□ 2.12
HUWE1-211ENST00000480438 OSCARQ8IYS5 282 aa28.2■■■□□ 2.1
HUWE1-211ENST00000480438 MRC2Q9UBG0 1479 aa28.11■■■□□ 2.09
HUWE1-211ENST00000480438 BAZ1AQ9NRL2 1556 aaPredicted RBP28.08■■■□□ 2.09
HUWE1-211ENST00000480438 PEG3Q9GZU2 1588 aa28.04■■■□□ 2.08
HUWE1-211ENST00000480438 CADPSQ9ULU8 1353 aa28.04■■■□□ 2.08
HUWE1-211ENST00000480438 WDR62O43379 1518 aa28.02■■■□□ 2.08
HUWE1-211ENST00000480438 MROH2BQ7Z745 1585 aa27.85■■■□□ 2.05
HUWE1-211ENST00000480438 CEP164Q9UPV0 1460 aa27.79■■■□□ 2.04
HUWE1-211ENST00000480438 RIMBP3CA6NJZ7 1639 aa27.78■■■□□ 2.04
HUWE1-211ENST00000480438 RIMBP3BA6NNM3 1639 aa27.78■■■□□ 2.04
HUWE1-211ENST00000480438 RIMBP3Q9UFD9 1639 aa27.78■■■□□ 2.04
HUWE1-211ENST00000480438 FANCD2Q9BXW9 1451 aa27.7■■■□□ 2.03
HUWE1-211ENST00000480438 TRHP20396 242 aaPredicted RBP27.67■■■□□ 2.02
HUWE1-211ENST00000480438 CYB5RLQ6IPT4 315 aa27.65■■■□□ 2.02
HUWE1-211ENST00000480438 ARHGEF11O15085 1522 aa27.62■■■□□ 2.01
HUWE1-211ENST00000480438 AEBP2Q6ZN18 517 aaPredicted RBP27.61■■■□□ 2.01
HUWE1-211ENST00000480438 URB2Q14146 1524 aaKnown RBP27.53■■■□□ 2
HUWE1-211ENST00000480438 CFTRP13569 1480 aa27.46■■□□□ 1.99
HUWE1-211ENST00000480438 WIZO95785 1651 aa27.42■■□□□ 1.98
HUWE1-211ENST00000480438 ZNF608Q9ULD9 1512 aaPredicted RBP27.39■■□□□ 1.98
HUWE1-211ENST00000480438 ARAP1Q96P48 1450 aa27.3■■□□□ 1.96
HUWE1-211ENST00000480438 IFT140Q96RY7 1462 aa27.28■■□□□ 1.96
HUWE1-211ENST00000480438 FBLN2P98095 1184 aa27.16■■□□□ 1.94
HUWE1-211ENST00000480438 RSF1Q96T23 1441 aaPredicted RBP27.1■■□□□ 1.93
HUWE1-211ENST00000480438 EIF4G3O43432 1585 aaKnown RBP27.06■■□□□ 1.92
HUWE1-211ENST00000480438 AQRO60306 1485 aaKnown RBP eCLIP27.05■■□□□ 1.921e-8■■■■□ 22.5
HUWE1-211ENST00000480438 TOPBP1Q92547 1522 aa27.04■■□□□ 1.92
HUWE1-211ENST00000480438 CHD1O14646 1710 aa27.03■■□□□ 1.92
HUWE1-211ENST00000480438 TOP2AP11388 1531 aaKnown RBP26.98■■□□□ 1.91
HUWE1-211ENST00000480438 ABCC8Q09428 1581 aa26.88■■□□□ 1.89
HUWE1-211ENST00000480438 PRDM2Q13029 1718 aa26.87■■□□□ 1.89
HUWE1-211ENST00000480438 TARBP1Q13395 1621 aaKnown RBP26.83■■□□□ 1.88
HUWE1-211ENST00000480438 DNMBPQ6XZF7 1577 aa26.8■■□□□ 1.88
HUWE1-211ENST00000480438 CCDC88BA6NC98 1476 aa26.78■■□□□ 1.88
HUWE1-211ENST00000480438 TDRD9Q8NDG6 1382 aaKnown RBP26.75■■□□□ 1.87
HUWE1-211ENST00000480438 CHMP7Q8WUX9 453 aaPredicted RBP26.75■■□□□ 1.87
HUWE1-211ENST00000480438 CLASP1Q7Z460 1538 aa26.75■■□□□ 1.87
HUWE1-211ENST00000480438 POLA1P09884 1462 aaPredicted RBP26.7■■□□□ 1.87
HUWE1-211ENST00000480438 RAD54L2Q9Y4B4 1467 aa26.68■■□□□ 1.86
HUWE1-211ENST00000480438 SNAPC4Q5SXM2 1469 aa26.68■■□□□ 1.86
HUWE1-211ENST00000480438 SYNJ1O43426 1573 aa26.63■■□□□ 1.85
HUWE1-211ENST00000480438 SOGA1O94964 1423 aa26.63■■□□□ 1.85
HUWE1-211ENST00000480438 GAPVD1Q14C86 1478 aa26.62■■□□□ 1.85
HUWE1-211ENST00000480438 ILDR1Q86SU0 546 aaPredicted RBP26.55■■□□□ 1.84
HUWE1-211ENST00000480438 MAGI1Q96QZ7 1491 aaPredicted RBP26.52■■□□□ 1.84
HUWE1-211ENST00000480438 SYNJ2O15056 1496 aa26.48■■□□□ 1.83
HUWE1-211ENST00000480438 GRIN2BQ13224 1484 aa26.46■■□□□ 1.83
HUWE1-211ENST00000480438 FGD5Q6ZNL6 1462 aa26.4■■□□□ 1.82
HUWE1-211ENST00000480438 WDR97A6NE52 1622 aa26.39■■□□□ 1.82
HUWE1-211ENST00000480438 ERCC6L2Q5T890 1561 aa26.33■■□□□ 1.8
HUWE1-211ENST00000480438 KDM4FA0A1W2PPD8 638 aa26.28■■□□□ 1.8
HUWE1-211ENST00000480438 CUX1P39880 1505 aa26.2■■□□□ 1.79
HUWE1-211ENST00000480438 KIF13AQ9H1H9 1805 aa26.17■■□□□ 1.78
HUWE1-211ENST00000480438 FAM69CQ0P6D2 419 aa26.17■■□□□ 1.78
HUWE1-211ENST00000480438 CEP170Q5SW79 1584 aa26.15■■□□□ 1.78
HUWE1-211ENST00000480438 PBRM1Q86U86 1689 aa26.15■■□□□ 1.78
HUWE1-211ENST00000480438 GRIN2AQ12879 1464 aa26.11■■□□□ 1.77
HUWE1-211ENST00000480438 NUP160Q12769 1436 aa26.06■■□□□ 1.76
HUWE1-211ENST00000480438 ABCC10Q5T3U5 1492 aa26.03■■□□□ 1.76
HUWE1-211ENST00000480438 ABCA10Q8WWZ4 1543 aa26.02■■□□□ 1.76
HUWE1-211ENST00000480438 ABCA5Q8WWZ7 1642 aa26■■□□□ 1.75
HUWE1-211ENST00000480438 NPM1P06748 294 aaKnown RBP eCLIP25.99■■□□□ 1.75
HUWE1-211ENST00000480438 SHROOM2Q13796 1616 aa25.97■■□□□ 1.75
HUWE1-211ENST00000480438 PRG4Q92954 1404 aaPredicted RBP25.96■■□□□ 1.75
HUWE1-211ENST00000480438 KDM6BO15054 1643 aa25.92■■□□□ 1.74
HUWE1-211ENST00000480438 JPH4Q96JJ6 628 aa25.91■■□□□ 1.74
HUWE1-211ENST00000480438 ADAMTS12P58397 1594 aa25.89■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms