RNA–Protein interactions for RNA: ENST00000480288.1

VGLL4-217, Transcript of vestigial like family member 4, humanhuman

TSL 4

Gene VGLL4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL4-217ENST00000480288 NISCHQ9Y2I1 1504 aa23.15■■□□□ 1.3
VGLL4-217ENST00000480288 ABCC9O60706 1549 aa20.94■□□□□ 0.94
VGLL4-217ENST00000480288 CCDC180Q9P1Z9 1646 aa20.77■□□□□ 0.92
VGLL4-217ENST00000480288 RB1CC1Q8TDY2 1594 aa19.84■□□□□ 0.77
VGLL4-217ENST00000480288 DCAF8L2P0C7V8 631 aa19.78■□□□□ 0.76
VGLL4-217ENST00000480288 NACADO15069 1562 aa19.66■□□□□ 0.74
VGLL4-217ENST00000480288 DNAJC5BQ9UF47 199 aa19.63■□□□□ 0.73
VGLL4-217ENST00000480288 PABPN1Q86U42 306 aaKnown RBP eCLIP19.52■□□□□ 0.72
VGLL4-217ENST00000480288 UNC13AQ9UPW8 1703 aa19.37■□□□□ 0.69
VGLL4-217ENST00000480288 MYO15BQ96JP2 1530 aa19.29■□□□□ 0.68
VGLL4-217ENST00000480288 BICRAQ9NZM4 1560 aa19.22■□□□□ 0.67
VGLL4-217ENST00000480288 ZCCHC6Q5VYS8 1495 aaKnown RBP19.16■□□□□ 0.66
VGLL4-217ENST00000480288 DCAF1Q9Y4B6 1507 aa19.05■□□□□ 0.64
VGLL4-217ENST00000480288 SCRIBQ14160 1630 aa19.03■□□□□ 0.64
VGLL4-217ENST00000480288 AEBP2Q6ZN18 517 aaPredicted RBP18.97■□□□□ 0.63
VGLL4-217ENST00000480288 SHROOM4Q9ULL8 1493 aa18.9■□□□□ 0.62
VGLL4-217ENST00000480288 CC2D2AQ9P2K1 1620 aa18.86■□□□□ 0.61
VGLL4-217ENST00000480288 CECR2Q9BXF3 1484 aa18.83■□□□□ 0.6
VGLL4-217ENST00000480288 EIF4G1Q04637 1599 aaKnown RBP18.79■□□□□ 0.6
VGLL4-217ENST00000480288 NCAPD3P42695 1498 aa18.13■□□□□ 0.49
VGLL4-217ENST00000480288 ATAD2BQ9ULI0 1458 aa18.11■□□□□ 0.49
VGLL4-217ENST00000480288 ERCC6Q03468 1493 aa18.1■□□□□ 0.49
VGLL4-217ENST00000480288 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
VGLL4-217ENST00000480288 SMARCA2P51531 1590 aa18.06■□□□□ 0.48
VGLL4-217ENST00000480288 DNAJC5Q9H3Z4 198 aa18.05■□□□□ 0.48
VGLL4-217ENST00000480288 HMGXB3Q12766 1538 aa17.99■□□□□ 0.47
VGLL4-217ENST00000480288 BAZ1AQ9NRL2 1556 aaPredicted RBP17.99■□□□□ 0.47
VGLL4-217ENST00000480288 CHIC1Q5VXU3 224 aa17.98■□□□□ 0.47
VGLL4-217ENST00000480288 CUX2O14529 1486 aa17.98■□□□□ 0.47
VGLL4-217ENST00000480288 BAZ1BQ9UIG0 1483 aaKnown RBP17.98■□□□□ 0.47
VGLL4-217ENST00000480288 NESP48681 1621 aa17.94■□□□□ 0.46
VGLL4-217ENST00000480288 MROH2BQ7Z745 1585 aa17.87■□□□□ 0.45
VGLL4-217ENST00000480288 PEG3Q9GZU2 1588 aa17.83■□□□□ 0.44
VGLL4-217ENST00000480288 LAMC3Q9Y6N6 1575 aa17.76■□□□□ 0.43
VGLL4-217ENST00000480288 THOC2Q8NI27 1593 aaKnown RBP17.72■□□□□ 0.43
VGLL4-217ENST00000480288 KIF21AQ7Z4S6 1674 aa17.71■□□□□ 0.42
VGLL4-217ENST00000480288 PDS5BQ9NTI5 1447 aa17.7■□□□□ 0.42
VGLL4-217ENST00000480288 WIZO95785 1651 aa17.67■□□□□ 0.42
VGLL4-217ENST00000480288 CADPSQ9ULU8 1353 aa17.62■□□□□ 0.41
VGLL4-217ENST00000480288 MRC2Q9UBG0 1479 aa17.54■□□□□ 0.4
VGLL4-217ENST00000480288 CEP164Q9UPV0 1460 aa17.48■□□□□ 0.39
VGLL4-217ENST00000480288 RSF1Q96T23 1441 aaPredicted RBP17.47■□□□□ 0.39
VGLL4-217ENST00000480288 WDR62O43379 1518 aa17.46■□□□□ 0.39
VGLL4-217ENST00000480288 FANCD2Q9BXW9 1451 aa17.45■□□□□ 0.38
VGLL4-217ENST00000480288 TOP2AP11388 1531 aaKnown RBP17.42■□□□□ 0.38
VGLL4-217ENST00000480288 TRIM41Q8WV44 630 aa17.4■□□□□ 0.38
VGLL4-217ENST00000480288 CFTRP13569 1480 aa17.37■□□□□ 0.37
VGLL4-217ENST00000480288 URB2Q14146 1524 aaKnown RBP17.29■□□□□ 0.36
VGLL4-217ENST00000480288 CCDC88BA6NC98 1476 aa17.24■□□□□ 0.35
VGLL4-217ENST00000480288 PRDM2Q13029 1718 aa17.22■□□□□ 0.35
VGLL4-217ENST00000480288 OSCARQ8IYS5 282 aa17.22■□□□□ 0.35
VGLL4-217ENST00000480288 IFT140Q96RY7 1462 aa17.12■□□□□ 0.33
VGLL4-217ENST00000480288 TOPBP1Q92547 1522 aa17.11■□□□□ 0.33
VGLL4-217ENST00000480288 ZNF608Q9ULD9 1512 aaPredicted RBP17.11■□□□□ 0.33
VGLL4-217ENST00000480288 ABCC8Q09428 1581 aa17.04■□□□□ 0.32
VGLL4-217ENST00000480288 DNMBPQ6XZF7 1577 aa17.03■□□□□ 0.32
VGLL4-217ENST00000480288 EIF4G3O43432 1585 aaKnown RBP17■□□□□ 0.31
VGLL4-217ENST00000480288 RIMBP3CA6NJZ7 1639 aa16.98■□□□□ 0.31
VGLL4-217ENST00000480288 RIMBP3BA6NNM3 1639 aa16.98■□□□□ 0.31
VGLL4-217ENST00000480288 RIMBP3Q9UFD9 1639 aa16.98■□□□□ 0.31
VGLL4-217ENST00000480288 FBLN2P98095 1184 aa16.97■□□□□ 0.31
VGLL4-217ENST00000480288 AQRO60306 1485 aaKnown RBP eCLIP16.96■□□□□ 0.313e-7■■■■■ 32.1
VGLL4-217ENST00000480288 TARBP1Q13395 1621 aaKnown RBP16.92■□□□□ 0.3
VGLL4-217ENST00000480288 POLA1P09884 1462 aaPredicted RBP16.91■□□□□ 0.3
VGLL4-217ENST00000480288 ARHGEF11O15085 1522 aa16.91■□□□□ 0.3
VGLL4-217ENST00000480288 CHD1O14646 1710 aa16.9■□□□□ 0.3
VGLL4-217ENST00000480288 RAD54L2Q9Y4B4 1467 aa16.9■□□□□ 0.3
VGLL4-217ENST00000480288 SOGA1O94964 1423 aa16.87■□□□□ 0.29
VGLL4-217ENST00000480288 CYB5RLQ6IPT4 315 aa16.87■□□□□ 0.29
VGLL4-217ENST00000480288 TDRD9Q8NDG6 1382 aaKnown RBP16.87■□□□□ 0.29
VGLL4-217ENST00000480288 SUPT5HO00267 1087 aaKnown RBP16.83■□□□□ 0.28
VGLL4-217ENST00000480288 FGD5Q6ZNL6 1462 aa16.83■□□□□ 0.28
VGLL4-217ENST00000480288 CUX1P39880 1505 aa16.79■□□□□ 0.28
VGLL4-217ENST00000480288 SNAPC4Q5SXM2 1469 aa16.79■□□□□ 0.28
VGLL4-217ENST00000480288 CHMP7Q8WUX9 453 aaPredicted RBP16.77■□□□□ 0.28
VGLL4-217ENST00000480288 TRHP20396 242 aaPredicted RBP16.76■□□□□ 0.27
VGLL4-217ENST00000480288 ARAP1Q96P48 1450 aa16.73■□□□□ 0.27
VGLL4-217ENST00000480288 WDR97A6NE52 1622 aa16.71■□□□□ 0.27
VGLL4-217ENST00000480288 GRIN2BQ13224 1484 aa16.71■□□□□ 0.27
VGLL4-217ENST00000480288 MAGI1Q96QZ7 1491 aaPredicted RBP16.69■□□□□ 0.26
VGLL4-217ENST00000480288 SYNJ1O43426 1573 aa16.68■□□□□ 0.26
VGLL4-217ENST00000480288 GAPVD1Q14C86 1478 aa16.66■□□□□ 0.26
VGLL4-217ENST00000480288 PBRM1Q86U86 1689 aa16.65■□□□□ 0.26
VGLL4-217ENST00000480288 SYNJ2O15056 1496 aa16.65■□□□□ 0.26
VGLL4-217ENST00000480288 CLASP1Q7Z460 1538 aa16.65■□□□□ 0.26
VGLL4-217ENST00000480288 ABCA10Q8WWZ4 1543 aa16.6■□□□□ 0.25
VGLL4-217ENST00000480288 ABCA5Q8WWZ7 1642 aa16.57■□□□□ 0.24
VGLL4-217ENST00000480288 WRNQ14191 1432 aaPredicted RBP eCLIP16.55■□□□□ 0.24
VGLL4-217ENST00000480288 GRIN2AQ12879 1464 aa16.49■□□□□ 0.23
VGLL4-217ENST00000480288 TOP2BQ02880 1626 aa16.48■□□□□ 0.23
VGLL4-217ENST00000480288 BIVM-ERCC5R4GMW8 1640 aa16.48■□□□□ 0.23
VGLL4-217ENST00000480288 ADAMTS12P58397 1594 aa16.47■□□□□ 0.23
VGLL4-217ENST00000480288 FHAD1B1AJZ9 1412 aa16.44■□□□□ 0.22
VGLL4-217ENST00000480288 CEP170Q5SW79 1584 aa16.43■□□□□ 0.22
VGLL4-217ENST00000480288 ERCC6L2Q5T890 1561 aa16.43■□□□□ 0.22
VGLL4-217ENST00000480288 NUP160Q12769 1436 aa16.4■□□□□ 0.22
VGLL4-217ENST00000480288 ERICH3Q5RHP9 1530 aa16.39■□□□□ 0.21
VGLL4-217ENST00000480288 PRG4Q92954 1404 aaPredicted RBP16.32■□□□□ 0.2
VGLL4-217ENST00000480288 SHROOM2Q13796 1616 aa16.31■□□□□ 0.2
VGLL4-217ENST00000480288 JPH4Q96JJ6 628 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms