RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 AEBP2Q6ZN18 517 aaPredicted RBP27.86■■■□□ 2.05
SMURF1-204ENST00000480055 CHIC1Q5VXU3 224 aa27.29■■□□□ 1.96
SMURF1-204ENST00000480055 NISCHQ9Y2I1 1504 aa26.37■■□□□ 1.81
SMURF1-204ENST00000480055 ABCC9O60706 1549 aa24.05■■□□□ 1.44
SMURF1-204ENST00000480055 CCDC180Q9P1Z9 1646 aa23.95■■□□□ 1.43
SMURF1-204ENST00000480055 PHF23Q9BUL5 403 aaPredicted RBP23.95■■□□□ 1.42
SMURF1-204ENST00000480055 SENP3Q9H4L4 574 aaPredicted RBP23.74■■□□□ 1.39
SMURF1-204ENST00000480055 RB1CC1Q8TDY2 1594 aa22.85■■□□□ 1.25
SMURF1-204ENST00000480055 DNAJC5BQ9UF47 199 aa22.75■■□□□ 1.23
SMURF1-204ENST00000480055 NACADO15069 1562 aa22.61■■□□□ 1.21
SMURF1-204ENST00000480055 UNC13AQ9UPW8 1703 aa22.5■■□□□ 1.19
SMURF1-204ENST00000480055 PLPPR3Q6T4P5 718 aa22.23■■□□□ 1.15
SMURF1-204ENST00000480055 PABPN1Q86U42 306 aaKnown RBP eCLIP22.23■■□□□ 1.15
SMURF1-204ENST00000480055 MYO15BQ96JP2 1530 aa22.22■■□□□ 1.15
SMURF1-204ENST00000480055 BICRAQ9NZM4 1560 aa22.21■■□□□ 1.15
SMURF1-204ENST00000480055 DCAF8L2P0C7V8 631 aa22.15■■□□□ 1.14
SMURF1-204ENST00000480055 FOXD1Q16676 465 aa21.98■■□□□ 1.11
SMURF1-204ENST00000480055 SHROOM4Q9ULL8 1493 aa21.9■■□□□ 1.1
SMURF1-204ENST00000480055 ZCCHC6Q5VYS8 1495 aaKnown RBP21.83■■□□□ 1.08
SMURF1-204ENST00000480055 DCAF1Q9Y4B6 1507 aa21.82■■□□□ 1.08
SMURF1-204ENST00000480055 CC2D2AQ9P2K1 1620 aa21.8■■□□□ 1.08
SMURF1-204ENST00000480055 CECR2Q9BXF3 1484 aa21.71■■□□□ 1.07
SMURF1-204ENST00000480055 SCRIBQ14160 1630 aa21.69■■□□□ 1.06
SMURF1-204ENST00000480055 EIF4G1Q04637 1599 aaKnown RBP21.67■■□□□ 1.06
SMURF1-204ENST00000480055 ADRA2BP18089 450 aa21.18■□□□□ 0.98
SMURF1-204ENST00000480055 PPP6R1Q9UPN7 881 aa21.15■□□□□ 0.98
SMURF1-204ENST00000480055 DNAJC5Q9H3Z4 198 aa21.13■□□□□ 0.97
SMURF1-204ENST00000480055 CUX2O14529 1486 aa20.91■□□□□ 0.94
SMURF1-204ENST00000480055 NCAPD3P42695 1498 aa20.82■□□□□ 0.92
SMURF1-204ENST00000480055 PIAS4Q8N2W9 510 aaPredicted RBP20.8■□□□□ 0.92
SMURF1-204ENST00000480055 ERCC6Q03468 1493 aa20.78■□□□□ 0.92
SMURF1-204ENST00000480055 HMGXB3Q12766 1538 aa20.73■□□□□ 0.91
SMURF1-204ENST00000480055 ATAD2BQ9ULI0 1458 aa20.71■□□□□ 0.91
SMURF1-204ENST00000480055 SMARCA4P51532 1647 aa20.7■□□□□ 0.9
SMURF1-204ENST00000480055 SMARCA2P51531 1590 aa20.69■□□□□ 0.9
SMURF1-204ENST00000480055 NESP48681 1621 aa20.59■□□□□ 0.89
SMURF1-204ENST00000480055 THOC2Q8NI27 1593 aaKnown RBP20.57■□□□□ 0.88
SMURF1-204ENST00000480055 PEG3Q9GZU2 1588 aa20.52■□□□□ 0.88
SMURF1-204ENST00000480055 BAZ1AQ9NRL2 1556 aaPredicted RBP20.51■□□□□ 0.87
SMURF1-204ENST00000480055 BAZ1BQ9UIG0 1483 aaKnown RBP20.5■□□□□ 0.87
SMURF1-204ENST00000480055 LAMC3Q9Y6N6 1575 aa20.48■□□□□ 0.87
SMURF1-204ENST00000480055 KIF21AQ7Z4S6 1674 aa20.46■□□□□ 0.87
SMURF1-204ENST00000480055 MSH5O43196 834 aa20.33■□□□□ 0.85
SMURF1-204ENST00000480055 MROH2BQ7Z745 1585 aa20.3■□□□□ 0.84
SMURF1-204ENST00000480055 PDS5BQ9NTI5 1447 aa20.26■□□□□ 0.83
SMURF1-204ENST00000480055 WDR62O43379 1518 aa20.17■□□□□ 0.82
SMURF1-204ENST00000480055 MRC2Q9UBG0 1479 aa20.16■□□□□ 0.82
SMURF1-204ENST00000480055 CADPSQ9ULU8 1353 aa20.12■□□□□ 0.81
SMURF1-204ENST00000480055 WIZO95785 1651 aa20.1■□□□□ 0.81
SMURF1-204ENST00000480055 TRIM41Q8WV44 630 aa20.02■□□□□ 0.8
SMURF1-204ENST00000480055 CEP164Q9UPV0 1460 aa20.01■□□□□ 0.79
SMURF1-204ENST00000480055 FANCD2Q9BXW9 1451 aa19.94■□□□□ 0.78
SMURF1-204ENST00000480055 PRDM2Q13029 1718 aa19.91■□□□□ 0.78
SMURF1-204ENST00000480055 CFTRP13569 1480 aa19.88■□□□□ 0.77
SMURF1-204ENST00000480055 TOP2AP11388 1531 aaKnown RBP19.82■□□□□ 0.76
SMURF1-204ENST00000480055 URB2Q14146 1524 aaKnown RBP19.82■□□□□ 0.76
SMURF1-204ENST00000480055 OSCARQ8IYS5 282 aa19.76■□□□□ 0.75
SMURF1-204ENST00000480055 RSF1Q96T23 1441 aaPredicted RBP19.73■□□□□ 0.75
SMURF1-204ENST00000480055 RIMBP3CA6NJZ7 1639 aa19.73■□□□□ 0.75
SMURF1-204ENST00000480055 RIMBP3BA6NNM3 1639 aa19.73■□□□□ 0.75
SMURF1-204ENST00000480055 RIMBP3Q9UFD9 1639 aa19.73■□□□□ 0.75
SMURF1-204ENST00000480055 IFT140Q96RY7 1462 aa19.61■□□□□ 0.73
SMURF1-204ENST00000480055 ZNF608Q9ULD9 1512 aaPredicted RBP19.6■□□□□ 0.73
SMURF1-204ENST00000480055 EIF4G3O43432 1585 aaKnown RBP19.58■□□□□ 0.73
SMURF1-204ENST00000480055 ARHGEF11O15085 1522 aa19.58■□□□□ 0.73
SMURF1-204ENST00000480055 PPP4R3CPQ6ZMV5 832 aa19.58■□□□□ 0.72
SMURF1-204ENST00000480055 TOPBP1Q92547 1522 aa19.56■□□□□ 0.72
SMURF1-204ENST00000480055 CHD1O14646 1710 aa19.55■□□□□ 0.72
SMURF1-204ENST00000480055 CCDC88BA6NC98 1476 aa19.52■□□□□ 0.72
SMURF1-204ENST00000480055 DNMBPQ6XZF7 1577 aa19.5■□□□□ 0.71
SMURF1-204ENST00000480055 ABCC8Q09428 1581 aa19.49■□□□□ 0.71
SMURF1-204ENST00000480055 SCAF1Q9H7N4 1312 aaKnown RBP19.48■□□□□ 0.71
SMURF1-204ENST00000480055 TARBP1Q13395 1621 aaKnown RBP19.47■□□□□ 0.71
SMURF1-204ENST00000480055 ARAP1Q96P48 1450 aa19.36■□□□□ 0.69
SMURF1-204ENST00000480055 AQRO60306 1485 aaKnown RBP eCLIP19.34■□□□□ 0.69
SMURF1-204ENST00000480055 POLA1P09884 1462 aaPredicted RBP19.33■□□□□ 0.68
SMURF1-204ENST00000480055 CYB5RLQ6IPT4 315 aa19.29■□□□□ 0.68
SMURF1-204ENST00000480055 WDR97A6NE52 1622 aa19.29■□□□□ 0.68
SMURF1-204ENST00000480055 CLASP1Q7Z460 1538 aa19.25■□□□□ 0.67
SMURF1-204ENST00000480055 RAD54L2Q9Y4B4 1467 aa19.22■□□□□ 0.67
SMURF1-204ENST00000480055 MAPK8IP2Q13387 824 aaPredicted RBP19.2■□□□□ 0.66
SMURF1-204ENST00000480055 SNAPC4Q5SXM2 1469 aa19.19■□□□□ 0.66
SMURF1-204ENST00000480055 SYNJ1O43426 1573 aa19.19■□□□□ 0.66
SMURF1-204ENST00000480055 TRHP20396 242 aaPredicted RBP19.17■□□□□ 0.66
SMURF1-204ENST00000480055 FBLN2P98095 1184 aa19.17■□□□□ 0.66
SMURF1-204ENST00000480055 FGD5Q6ZNL6 1462 aa19.16■□□□□ 0.66
SMURF1-204ENST00000480055 SOGA1O94964 1423 aa19.16■□□□□ 0.66
SMURF1-204ENST00000480055 PBRM1Q86U86 1689 aa19.15■□□□□ 0.66
SMURF1-204ENST00000480055 NCBP3Q53F19 620 aaKnown RBP19.15■□□□□ 0.66
SMURF1-204ENST00000480055 MAGI1Q96QZ7 1491 aaPredicted RBP19.15■□□□□ 0.66
SMURF1-204ENST00000480055 TDRD9Q8NDG6 1382 aaKnown RBP19.14■□□□□ 0.65
SMURF1-204ENST00000480055 KCNA4P22459 653 aa19.12■□□□□ 0.65
SMURF1-204ENST00000480055 CUX1P39880 1505 aa19.11■□□□□ 0.65
SMURF1-204ENST00000480055 GRIN2BQ13224 1484 aa19.08■□□□□ 0.64
SMURF1-204ENST00000480055 SYNJ2O15056 1496 aa19.07■□□□□ 0.64
SMURF1-204ENST00000480055 CNKSR2Q8WXI2 1034 aa19.03■□□□□ 0.64
SMURF1-204ENST00000480055 ABCA5Q8WWZ7 1642 aa19.02■□□□□ 0.64
SMURF1-204ENST00000480055 CHMP7Q8WUX9 453 aaPredicted RBP19.01■□□□□ 0.63
SMURF1-204ENST00000480055 GAPVD1Q14C86 1478 aa18.97■□□□□ 0.63
SMURF1-204ENST00000480055 ABCA10Q8WWZ4 1543 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms