RNA–Protein interactions for RNA: ENST00000479995.2

NOTCH2NL-202, Transcript of Notch homolog 2 N-terminal-like protein, humanhuman

TSL 5

Gene NOTCH2NL, Length 278 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2NL-202ENST00000479995 NISCHQ9Y2I1 1504 aa20.94■□□□□ 0.94
NOTCH2NL-202ENST00000479995 ABCC9O60706 1549 aa18.7■□□□□ 0.58
NOTCH2NL-202ENST00000479995 CCDC180Q9P1Z9 1646 aa18.69■□□□□ 0.58
NOTCH2NL-202ENST00000479995 RB1CC1Q8TDY2 1594 aa17.76■□□□□ 0.43
NOTCH2NL-202ENST00000479995 DCAF8L2P0C7V8 631 aa17.75■□□□□ 0.43
NOTCH2NL-202ENST00000479995 NACADO15069 1562 aa17.65■□□□□ 0.42
NOTCH2NL-202ENST00000479995 PABPN1Q86U42 306 aaKnown RBP eCLIP17.45■□□□□ 0.38
NOTCH2NL-202ENST00000479995 DNAJC5BQ9UF47 199 aa17.41■□□□□ 0.38
NOTCH2NL-202ENST00000479995 ZCCHC6Q5VYS8 1495 aaKnown RBP17.39■□□□□ 0.37
NOTCH2NL-202ENST00000479995 MYO15BQ96JP2 1530 aa17.38■□□□□ 0.37
NOTCH2NL-202ENST00000479995 UNC13AQ9UPW8 1703 aa17.36■□□□□ 0.37
NOTCH2NL-202ENST00000479995 BICRAQ9NZM4 1560 aa17.26■□□□□ 0.35
NOTCH2NL-202ENST00000479995 DCAF1Q9Y4B6 1507 aa17.23■□□□□ 0.35
NOTCH2NL-202ENST00000479995 SCRIBQ14160 1630 aa17.17■□□□□ 0.34
NOTCH2NL-202ENST00000479995 SHROOM4Q9ULL8 1493 aa16.93■□□□□ 0.3
NOTCH2NL-202ENST00000479995 CC2D2AQ9P2K1 1620 aa16.85■□□□□ 0.29
NOTCH2NL-202ENST00000479995 EIF4G1Q04637 1599 aaKnown RBP16.82■□□□□ 0.28
NOTCH2NL-202ENST00000479995 CECR2Q9BXF3 1484 aa16.79■□□□□ 0.28
NOTCH2NL-202ENST00000479995 SMARCA4P51532 1647 aa16.33■□□□□ 0.2
NOTCH2NL-202ENST00000479995 ATAD2BQ9ULI0 1458 aa16.3■□□□□ 0.2
NOTCH2NL-202ENST00000479995 NCAPD3P42695 1498 aa16.29■□□□□ 0.2
NOTCH2NL-202ENST00000479995 SMARCA2P51531 1590 aa16.24■□□□□ 0.19
NOTCH2NL-202ENST00000479995 BAZ1AQ9NRL2 1556 aaPredicted RBP16.24■□□□□ 0.19
NOTCH2NL-202ENST00000479995 MROH2BQ7Z745 1585 aa16.19■□□□□ 0.18
NOTCH2NL-202ENST00000479995 HMGXB3Q12766 1538 aa16.19■□□□□ 0.18
NOTCH2NL-202ENST00000479995 BAZ1BQ9UIG0 1483 aaKnown RBP16.17■□□□□ 0.18
NOTCH2NL-202ENST00000479995 ERCC6Q03468 1493 aa16.12■□□□□ 0.17
NOTCH2NL-202ENST00000479995 NESP48681 1621 aa16.1■□□□□ 0.17
NOTCH2NL-202ENST00000479995 PEG3Q9GZU2 1588 aa16.09■□□□□ 0.17
NOTCH2NL-202ENST00000479995 WIZO95785 1651 aa16■□□□□ 0.15
NOTCH2NL-202ENST00000479995 CUX2O14529 1486 aa15.96■□□□□ 0.14
NOTCH2NL-202ENST00000479995 LAMC3Q9Y6N6 1575 aa15.91■□□□□ 0.14
NOTCH2NL-202ENST00000479995 RSF1Q96T23 1441 aaPredicted RBP15.88■□□□□ 0.13
NOTCH2NL-202ENST00000479995 THOC2Q8NI27 1593 aaKnown RBP15.85■□□□□ 0.13
NOTCH2NL-202ENST00000479995 KIF21AQ7Z4S6 1674 aa15.85■□□□□ 0.13
NOTCH2NL-202ENST00000479995 CADPSQ9ULU8 1353 aa15.83■□□□□ 0.12
NOTCH2NL-202ENST00000479995 PDS5BQ9NTI5 1447 aa15.83■□□□□ 0.12
NOTCH2NL-202ENST00000479995 DNAJC5Q9H3Z4 198 aa15.82■□□□□ 0.12
NOTCH2NL-202ENST00000479995 TOP2AP11388 1531 aaKnown RBP15.78■□□□□ 0.12
NOTCH2NL-202ENST00000479995 MRC2Q9UBG0 1479 aa15.71■□□□□ 0.11
NOTCH2NL-202ENST00000479995 FANCD2Q9BXW9 1451 aa15.69■□□□□ 0.1
NOTCH2NL-202ENST00000479995 CEP164Q9UPV0 1460 aa15.69■□□□□ 0.1
NOTCH2NL-202ENST00000479995 CFTRP13569 1480 aa15.67■□□□□ 0.1
NOTCH2NL-202ENST00000479995 CHIC1Q5VXU3 224 aa15.67■□□□□ 0.1
NOTCH2NL-202ENST00000479995 WDR62O43379 1518 aa15.65■□□□□ 0.1
NOTCH2NL-202ENST00000479995 CCDC88BA6NC98 1476 aa15.61■□□□□ 0.09
NOTCH2NL-202ENST00000479995 AEBP2Q6ZN18 517 aaPredicted RBP15.57■□□□□ 0.08
NOTCH2NL-202ENST00000479995 URB2Q14146 1524 aaKnown RBP15.56■□□□□ 0.08
NOTCH2NL-202ENST00000479995 PRDM2Q13029 1718 aa15.49■□□□□ 0.07
NOTCH2NL-202ENST00000479995 TOPBP1Q92547 1522 aa15.4■□□□□ 0.06
NOTCH2NL-202ENST00000479995 SUPT5HO00267 1087 aaKnown RBP15.38■□□□□ 0.05
NOTCH2NL-202ENST00000479995 ZNF608Q9ULD9 1512 aaPredicted RBP15.37■□□□□ 0.05
NOTCH2NL-202ENST00000479995 IFT140Q96RY7 1462 aa15.34■□□□□ 0.05
NOTCH2NL-202ENST00000479995 DNMBPQ6XZF7 1577 aa15.33■□□□□ 0.05
NOTCH2NL-202ENST00000479995 TRIM41Q8WV44 630 aa15.31■□□□□ 0.04
NOTCH2NL-202ENST00000479995 ABCC8Q09428 1581 aa15.29■□□□□ 0.04
NOTCH2NL-202ENST00000479995 OSCARQ8IYS5 282 aa15.28■□□□□ 0.04
NOTCH2NL-202ENST00000479995 EIF4G3O43432 1585 aaKnown RBP15.26■□□□□ 0.03
NOTCH2NL-202ENST00000479995 POLA1P09884 1462 aaPredicted RBP15.25■□□□□ 0.03
NOTCH2NL-202ENST00000479995 AQRO60306 1485 aaKnown RBP eCLIP15.24■□□□□ 0.03
NOTCH2NL-202ENST00000479995 TARBP1Q13395 1621 aaKnown RBP15.24■□□□□ 0.03
NOTCH2NL-202ENST00000479995 RAD54L2Q9Y4B4 1467 aa15.23■□□□□ 0.03
NOTCH2NL-202ENST00000479995 CUX1P39880 1505 aa15.2■□□□□ 0.02
NOTCH2NL-202ENST00000479995 FGD5Q6ZNL6 1462 aa15.2■□□□□ 0.02
NOTCH2NL-202ENST00000479995 SOGA1O94964 1423 aa15.18■□□□□ 0.02
NOTCH2NL-202ENST00000479995 TDRD9Q8NDG6 1382 aaKnown RBP15.17■□□□□ 0.02
NOTCH2NL-202ENST00000479995 FBLN2P98095 1184 aa15.15■□□□□ 0.02
NOTCH2NL-202ENST00000479995 CHD1O14646 1710 aa15.12■□□□□ 0.01
NOTCH2NL-202ENST00000479995 RIMBP3CA6NJZ7 1639 aa15.1■□□□□ 0.01
NOTCH2NL-202ENST00000479995 RIMBP3BA6NNM3 1639 aa15.1■□□□□ 0.01
NOTCH2NL-202ENST00000479995 RIMBP3Q9UFD9 1639 aa15.1■□□□□ 0.01
NOTCH2NL-202ENST00000479995 SNAPC4Q5SXM2 1469 aa15.08■□□□□ 0.01
NOTCH2NL-202ENST00000479995 ARHGEF11O15085 1522 aa15.06■□□□□ 0
NOTCH2NL-202ENST00000479995 WDR97A6NE52 1622 aa15.03■□□□□ -0
NOTCH2NL-202ENST00000479995 GRIN2BQ13224 1484 aa15.02■□□□□ -0
NOTCH2NL-202ENST00000479995 CHMP7Q8WUX9 453 aaPredicted RBP15□□□□□ -0.01
NOTCH2NL-202ENST00000479995 GAPVD1Q14C86 1478 aa15□□□□□ -0.01
NOTCH2NL-202ENST00000479995 SYNJ1O43426 1573 aa14.99□□□□□ -0.01
NOTCH2NL-202ENST00000479995 MAGI1Q96QZ7 1491 aaPredicted RBP14.99□□□□□ -0.01
NOTCH2NL-202ENST00000479995 WRNQ14191 1432 aaPredicted RBP eCLIP14.99□□□□□ -0.01
NOTCH2NL-202ENST00000479995 ABCA10Q8WWZ4 1543 aa14.98□□□□□ -0.01
NOTCH2NL-202ENST00000479995 PBRM1Q86U86 1689 aa14.98□□□□□ -0.01
NOTCH2NL-202ENST00000479995 CYB5RLQ6IPT4 315 aa14.98□□□□□ -0.01
NOTCH2NL-202ENST00000479995 ABCA5Q8WWZ7 1642 aa14.96□□□□□ -0.01
NOTCH2NL-202ENST00000479995 TOP2BQ02880 1626 aa14.95□□□□□ -0.02
NOTCH2NL-202ENST00000479995 BIVM-ERCC5R4GMW8 1640 aa14.95□□□□□ -0.02
NOTCH2NL-202ENST00000479995 SYNJ2O15056 1496 aa14.95□□□□□ -0.02
NOTCH2NL-202ENST00000479995 CLASP1Q7Z460 1538 aa14.93□□□□□ -0.02
NOTCH2NL-202ENST00000479995 ARAP1Q96P48 1450 aa14.93□□□□□ -0.02
NOTCH2NL-202ENST00000479995 ADAMTS12P58397 1594 aa14.85□□□□□ -0.03
NOTCH2NL-202ENST00000479995 GRIN2AQ12879 1464 aa14.84□□□□□ -0.03
NOTCH2NL-202ENST00000479995 FHAD1B1AJZ9 1412 aa14.8□□□□□ -0.04
NOTCH2NL-202ENST00000479995 CEP170Q5SW79 1584 aa14.8□□□□□ -0.04
NOTCH2NL-202ENST00000479995 TRHP20396 242 aaPredicted RBP14.79□□□□□ -0.04
NOTCH2NL-202ENST00000479995 ERICH3Q5RHP9 1530 aa14.78□□□□□ -0.04
NOTCH2NL-202ENST00000479995 ERCC6L2Q5T890 1561 aa14.77□□□□□ -0.04
NOTCH2NL-202ENST00000479995 NUP160Q12769 1436 aa14.76□□□□□ -0.05
NOTCH2NL-202ENST00000479995 KIF27Q86VH2 1401 aa14.67□□□□□ -0.06
NOTCH2NL-202ENST00000479995 SHROOM2Q13796 1616 aa14.66□□□□□ -0.06
NOTCH2NL-202ENST00000479995 PRG4Q92954 1404 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms