RNA–Protein interactions for RNA: ENST00000479293.5

SFXN5-213, Transcript of sideroflexin 5, humanhuman

TSL 2

Gene SFXN5, Length 1,808 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-213ENST00000479293 NISCHQ9Y2I1 1504 aa56.14■■■■■ 6.58
SFXN5-213ENST00000479293 CCDC180Q9P1Z9 1646 aa48.89■■■■■ 5.42
SFXN5-213ENST00000479293 ZCCHC6Q5VYS8 1495 aaKnown RBP47.21■■■■■ 5.15
SFXN5-213ENST00000479293 DCAF1Q9Y4B6 1507 aa46.39■■■■■ 5.02
SFXN5-213ENST00000479293 DCAF8L2P0C7V8 631 aa46.26■■■■■ 5
SFXN5-213ENST00000479293 ABCC9O60706 1549 aa46.1■■■■■ 4.97
SFXN5-213ENST00000479293 SHROOM4Q9ULL8 1493 aa45.94■■■■■ 4.95
SFXN5-213ENST00000479293 MYO15BQ96JP2 1530 aa45.76■■■■■ 4.92
SFXN5-213ENST00000479293 NACADO15069 1562 aa45.46■■■■■ 4.87
SFXN5-213ENST00000479293 RB1CC1Q8TDY2 1594 aa45.04■■■■■ 4.8
SFXN5-213ENST00000479293 SCRIBQ14160 1630 aa45.03■■■■■ 4.8
SFXN5-213ENST00000479293 UNC13AQ9UPW8 1703 aa44.27■■■■■ 4.68
SFXN5-213ENST00000479293 SUPT5HO00267 1087 aaKnown RBP44.24■■■■■ 4.67
SFXN5-213ENST00000479293 BICRAQ9NZM4 1560 aa43.75■■■■■ 4.59
SFXN5-213ENST00000479293 CECR2Q9BXF3 1484 aa43.65■■■■■ 4.58
SFXN5-213ENST00000479293 RSF1Q96T23 1441 aaPredicted RBP43.62■■■■■ 4.57
SFXN5-213ENST00000479293 PABPN1Q86U42 306 aaKnown RBP eCLIP43.49■■■■■ 4.55
SFXN5-213ENST00000479293 MROH2BQ7Z745 1585 aa43.42■■■■■ 4.54
SFXN5-213ENST00000479293 BAZ1AQ9NRL2 1556 aaPredicted RBP43.32■■■■■ 4.53
SFXN5-213ENST00000479293 SMARCA4P51532 1647 aa43.16■■■■■ 4.5
SFXN5-213ENST00000479293 WIZO95785 1651 aa43.1■■■■■ 4.49
SFXN5-213ENST00000479293 TOP2AP11388 1531 aaKnown RBP42.6■■■■■ 4.41
SFXN5-213ENST00000479293 PEG3Q9GZU2 1588 aa42.6■■■■■ 4.41
SFXN5-213ENST00000479293 CHIC1Q5VXU3 224 aa42.43■■■■■ 4.38
SFXN5-213ENST00000479293 EIF4G1Q04637 1599 aaKnown RBP42.39■■■■■ 4.38
SFXN5-213ENST00000479293 ATAD2BQ9ULI0 1458 aa42.38■■■■■ 4.37
SFXN5-213ENST00000479293 SMARCA2P51531 1590 aa42.33■■■■■ 4.37
SFXN5-213ENST00000479293 CCDC88BA6NC98 1476 aa42.17■■■■■ 4.34
SFXN5-213ENST00000479293 BAZ1BQ9UIG0 1483 aaKnown RBP42.13■■■■■ 4.34
SFXN5-213ENST00000479293 NCAPD3P42695 1498 aa41.95■■■■■ 4.31
SFXN5-213ENST00000479293 HMGXB3Q12766 1538 aa41.94■■■■■ 4.3
SFXN5-213ENST00000479293 CC2D2AQ9P2K1 1620 aa41.74■■■■■ 4.27
SFXN5-213ENST00000479293 TRIM41Q8WV44 630 aa41.54■■■■■ 4.24
SFXN5-213ENST00000479293 ABCC8Q09428 1581 aa41.38■■■■■ 4.22
SFXN5-213ENST00000479293 CFTRP13569 1480 aa41.09■■■■■ 4.17
SFXN5-213ENST00000479293 WRNQ14191 1432 aaPredicted RBP eCLIP41.03■■■■■ 4.16
SFXN5-213ENST00000479293 PRDM2Q13029 1718 aa40.96■■■■■ 4.15
SFXN5-213ENST00000479293 SYNJ1O43426 1573 aa40.93■■■■■ 4.14
SFXN5-213ENST00000479293 CADPSQ9ULU8 1353 aa40.88■■■■■ 4.14
SFXN5-213ENST00000479293 LOC105371045A0A1W2PR82 267 aa40.83■■■■■ 4.13
SFXN5-213ENST00000479293 FAM9AQ8IZU1 332 aaPredicted RBP40.83■■■■■ 4.13
SFXN5-213ENST00000479293 DNAJC5BQ9UF47 199 aa40.72■■■■■ 4.11
SFXN5-213ENST00000479293 TOP2BQ02880 1626 aa40.71■■■■■ 4.11
SFXN5-213ENST00000479293 BIVM-ERCC5R4GMW8 1640 aa40.69■■■■■ 4.1
SFXN5-213ENST00000479293 SOGA1O94964 1423 aa40.61■■■■■ 4.09
SFXN5-213ENST00000479293 CUX1P39880 1505 aa40.59■■■■■ 4.09
SFXN5-213ENST00000479293 NESP48681 1621 aa40.55■■■■■ 4.08
SFXN5-213ENST00000479293 LAMC3Q9Y6N6 1575 aa40.52■■■■■ 4.08
SFXN5-213ENST00000479293 EEA1Q15075 1411 aa40.48■■■■■ 4.07
SFXN5-213ENST00000479293 RUSC2Q8N2Y8 1516 aa40.48■■■■■ 4.07
SFXN5-213ENST00000479293 FANCD2Q9BXW9 1451 aa40.47■■■■■ 4.07
SFXN5-213ENST00000479293 EHMT2Q96KQ7 1210 aa40.28■■■■■ 4.04
SFXN5-213ENST00000479293 CSRNP3Q8WYN3 585 aa40.25■■■■■ 4.03
SFXN5-213ENST00000479293 CEP164Q9UPV0 1460 aa40.19■■■■■ 4.02
SFXN5-213ENST00000479293 PDS5BQ9NTI5 1447 aa40.16■■■■■ 4.02
SFXN5-213ENST00000479293 DNMBPQ6XZF7 1577 aa40.14■■■■■ 4.02
SFXN5-213ENST00000479293 FGD5Q6ZNL6 1462 aa40.1■■■■■ 4.01
SFXN5-213ENST00000479293 KIF21AQ7Z4S6 1674 aa40.09■■■■■ 4.01
SFXN5-213ENST00000479293 TOPBP1Q92547 1522 aa40.06■■■■■ 4
SFXN5-213ENST00000479293 KIF21BO75037 1637 aa40.03■■■■■ 4
SFXN5-213ENST00000479293 URB2Q14146 1524 aaKnown RBP39.99■■■■□ 3.99
SFXN5-213ENST00000479293 GOLGA3Q08378 1498 aa39.98■■■■□ 3.99
SFXN5-213ENST00000479293 KIF27Q86VH2 1401 aa39.96■■■■□ 3.99
SFXN5-213ENST00000479293 POLA1P09884 1462 aaPredicted RBP39.89■■■■□ 3.98
SFXN5-213ENST00000479293 TNIKQ9UKE5 1360 aa39.87■■■■□ 3.97
SFXN5-213ENST00000479293 CUX2O14529 1486 aa39.86■■■■□ 3.97
SFXN5-213ENST00000479293 RAPGEF2Q9Y4G8 1499 aa39.78■■■■□ 3.96
SFXN5-213ENST00000479293 PRXQ9BXM0 1461 aa39.77■■■■□ 3.96
SFXN5-213ENST00000479293 RAD54L2Q9Y4B4 1467 aa39.77■■■■□ 3.96
SFXN5-213ENST00000479293 UBTFP17480 764 aaKnown RBP39.75■■■■□ 3.95
SFXN5-213ENST00000479293 ABCA10Q8WWZ4 1543 aa39.73■■■■□ 3.95
SFXN5-213ENST00000479293 ERICH3Q5RHP9 1530 aa39.71■■■■□ 3.95
SFXN5-213ENST00000479293 CEP162Q5TB80 1403 aa39.7■■■■□ 3.95
SFXN5-213ENST00000479293 MRC2Q9UBG0 1479 aa39.68■■■■□ 3.94
SFXN5-213ENST00000479293 WDR97A6NE52 1622 aa39.66■■■■□ 3.94
SFXN5-213ENST00000479293 IGF1RP08069 1367 aa39.6■■■■□ 3.93
SFXN5-213ENST00000479293 WDR62O43379 1518 aa39.49■■■■□ 3.91
SFXN5-213ENST00000479293 TARBP1Q13395 1621 aaKnown RBP39.48■■■■□ 3.91
SFXN5-213ENST00000479293 ERCC6Q03468 1493 aa39.46■■■■□ 3.91
SFXN5-213ENST00000479293 ABCA5Q8WWZ7 1642 aa39.44■■■■□ 3.9
SFXN5-213ENST00000479293 CARMIL1Q5VZK9 1371 aa39.4■■■■□ 3.9
SFXN5-213ENST00000479293 THOC2Q8NI27 1593 aaKnown RBP39.37■■■■□ 3.89
SFXN5-213ENST00000479293 CLIP1P30622 1438 aa39.34■■■■□ 3.89
SFXN5-213ENST00000479293 TDRD9Q8NDG6 1382 aaKnown RBP39.34■■■■□ 3.89
SFXN5-213ENST00000479293 CUL7Q14999 1698 aa39.32■■■■□ 3.88
SFXN5-213ENST00000479293 GAPVD1Q14C86 1478 aa39.3■■■■□ 3.88
SFXN5-213ENST00000479293 IFT140Q96RY7 1462 aa39.2■■■■□ 3.87
SFXN5-213ENST00000479293 PBRM1Q86U86 1689 aa39.13■■■■□ 3.86
SFXN5-213ENST00000479293 RANGAP1P46060 587 aaPredicted RBP39.1■■■■□ 3.85
SFXN5-213ENST00000479293 PCGF6Q9BYE7 350 aa39.1■■■■□ 3.85
SFXN5-213ENST00000479293 AQRO60306 1485 aaKnown RBP eCLIP39.07■■■■□ 3.852e-7■■■■□ 22.1
SFXN5-213ENST00000479293 ZNF608Q9ULD9 1512 aaPredicted RBP39.04■■■■□ 3.84
SFXN5-213ENST00000479293 TRIM26Q12899 539 aaPredicted RBP39.03■■■■□ 3.84
SFXN5-213ENST00000479293 VPS8Q8N3P4 1428 aa39.02■■■■□ 3.84
SFXN5-213ENST00000479293 ARAP1Q96P48 1450 aa38.99■■■■□ 3.83
SFXN5-213ENST00000479293 GRIN2BQ13224 1484 aa38.95■■■■□ 3.83
SFXN5-213ENST00000479293 CTTNBP2Q8WZ74 1663 aa38.94■■■■□ 3.82
SFXN5-213ENST00000479293 ARHGAP35Q9NRY4 1499 aa38.93■■■■□ 3.82
SFXN5-213ENST00000479293 EIF4G3O43432 1585 aaKnown RBP38.93■■■■□ 3.82
SFXN5-213ENST00000479293 PPARGC1BQ86YN6 1023 aaKnown RBP38.92■■■■□ 3.82
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms