RNA–Protein interactions for RNA: ENST00000479261.1

DEPDC5-217, Transcript of DEP domain containing 5, humanhuman

TSL 2

Gene DEPDC5, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-217ENST00000479261 NISCHQ9Y2I1 1504 aa30.21■■■□□ 2.43
DEPDC5-217ENST00000479261 CCDC180Q9P1Z9 1646 aa26.74■■□□□ 1.87
DEPDC5-217ENST00000479261 ABCC9O60706 1549 aa26.17■■□□□ 1.78
DEPDC5-217ENST00000479261 NACADO15069 1562 aa25.18■■□□□ 1.62
DEPDC5-217ENST00000479261 RB1CC1Q8TDY2 1594 aa25.14■■□□□ 1.62
DEPDC5-217ENST00000479261 ZCCHC6Q5VYS8 1495 aaKnown RBP25.14■■□□□ 1.61
DEPDC5-217ENST00000479261 MYO15BQ96JP2 1530 aa25.12■■□□□ 1.61
DEPDC5-217ENST00000479261 DCAF8L2P0C7V8 631 aa25.11■■□□□ 1.61
DEPDC5-217ENST00000479261 DCAF1Q9Y4B6 1507 aa25.02■■□□□ 1.6
DEPDC5-217ENST00000479261 UNC13AQ9UPW8 1703 aa24.66■■□□□ 1.54
DEPDC5-217ENST00000479261 BICRAQ9NZM4 1560 aa24.54■■□□□ 1.52
DEPDC5-217ENST00000479261 PABPN1Q86U42 306 aaKnown RBP eCLIP24.52■■□□□ 1.52
DEPDC5-217ENST00000479261 SCRIBQ14160 1630 aa24.36■■□□□ 1.49
DEPDC5-217ENST00000479261 DNAJC5BQ9UF47 199 aa24.24■■□□□ 1.47
DEPDC5-217ENST00000479261 SHROOM4Q9ULL8 1493 aa24.16■■□□□ 1.46
DEPDC5-217ENST00000479261 EIF4G1Q04637 1599 aaKnown RBP23.8■■□□□ 1.4
DEPDC5-217ENST00000479261 CC2D2AQ9P2K1 1620 aa23.69■■□□□ 1.38
DEPDC5-217ENST00000479261 CECR2Q9BXF3 1484 aa23.58■■□□□ 1.37
DEPDC5-217ENST00000479261 SMARCA4P51532 1647 aa23.37■■□□□ 1.33
DEPDC5-217ENST00000479261 BAZ1AQ9NRL2 1556 aaPredicted RBP23.33■■□□□ 1.33
DEPDC5-217ENST00000479261 NCAPD3P42695 1498 aa23.33■■□□□ 1.33
DEPDC5-217ENST00000479261 ATAD2BQ9ULI0 1458 aa23.3■■□□□ 1.32
DEPDC5-217ENST00000479261 MROH2BQ7Z745 1585 aa23.3■■□□□ 1.32
DEPDC5-217ENST00000479261 PEG3Q9GZU2 1588 aa23.23■■□□□ 1.31
DEPDC5-217ENST00000479261 SMARCA2P51531 1590 aa23.18■■□□□ 1.3
DEPDC5-217ENST00000479261 HMGXB3Q12766 1538 aa23.11■■□□□ 1.29
DEPDC5-217ENST00000479261 RSF1Q96T23 1441 aaPredicted RBP23.07■■□□□ 1.28
DEPDC5-217ENST00000479261 BAZ1BQ9UIG0 1483 aaKnown RBP23■■□□□ 1.27
DEPDC5-217ENST00000479261 WIZO95785 1651 aa23■■□□□ 1.27
DEPDC5-217ENST00000479261 TOP2AP11388 1531 aaKnown RBP22.72■■□□□ 1.23
DEPDC5-217ENST00000479261 NESP48681 1621 aa22.71■■□□□ 1.23
DEPDC5-217ENST00000479261 CADPSQ9ULU8 1353 aa22.62■■□□□ 1.21
DEPDC5-217ENST00000479261 LAMC3Q9Y6N6 1575 aa22.59■■□□□ 1.21
DEPDC5-217ENST00000479261 CCDC88BA6NC98 1476 aa22.54■■□□□ 1.2
DEPDC5-217ENST00000479261 CFTRP13569 1480 aa22.49■■□□□ 1.19
DEPDC5-217ENST00000479261 ERCC6Q03468 1493 aa22.43■■□□□ 1.18
DEPDC5-217ENST00000479261 PDS5BQ9NTI5 1447 aa22.43■■□□□ 1.18
DEPDC5-217ENST00000479261 SUPT5HO00267 1087 aaKnown RBP22.37■■□□□ 1.17
DEPDC5-217ENST00000479261 KIF21AQ7Z4S6 1674 aa22.36■■□□□ 1.17
DEPDC5-217ENST00000479261 THOC2Q8NI27 1593 aaKnown RBP22.31■■□□□ 1.16
DEPDC5-217ENST00000479261 CUX2O14529 1486 aa22.3■■□□□ 1.16
DEPDC5-217ENST00000479261 FANCD2Q9BXW9 1451 aa22.29■■□□□ 1.16
DEPDC5-217ENST00000479261 MRC2Q9UBG0 1479 aa22.2■■□□□ 1.14
DEPDC5-217ENST00000479261 CEP164Q9UPV0 1460 aa22.2■■□□□ 1.14
DEPDC5-217ENST00000479261 PRDM2Q13029 1718 aa22.17■■□□□ 1.14
DEPDC5-217ENST00000479261 WDR62O43379 1518 aa22.16■■□□□ 1.14
DEPDC5-217ENST00000479261 URB2Q14146 1524 aaKnown RBP22.12■■□□□ 1.13
DEPDC5-217ENST00000479261 TOPBP1Q92547 1522 aa21.96■■□□□ 1.11
DEPDC5-217ENST00000479261 ABCC8Q09428 1581 aa21.92■■□□□ 1.1
DEPDC5-217ENST00000479261 DNMBPQ6XZF7 1577 aa21.88■■□□□ 1.09
DEPDC5-217ENST00000479261 CUX1P39880 1505 aa21.82■■□□□ 1.08
DEPDC5-217ENST00000479261 IFT140Q96RY7 1462 aa21.78■■□□□ 1.08
DEPDC5-217ENST00000479261 POLA1P09884 1462 aaPredicted RBP21.77■■□□□ 1.08
DEPDC5-217ENST00000479261 TARBP1Q13395 1621 aaKnown RBP21.75■■□□□ 1.07
DEPDC5-217ENST00000479261 ZNF608Q9ULD9 1512 aaPredicted RBP21.75■■□□□ 1.07
DEPDC5-217ENST00000479261 DNAJC5Q9H3Z4 198 aa21.73■■□□□ 1.07
DEPDC5-217ENST00000479261 SOGA1O94964 1423 aa21.7■■□□□ 1.06
DEPDC5-217ENST00000479261 FGD5Q6ZNL6 1462 aa21.7■■□□□ 1.06
DEPDC5-217ENST00000479261 RAD54L2Q9Y4B4 1467 aa21.7■■□□□ 1.06
DEPDC5-217ENST00000479261 WRNQ14191 1432 aaPredicted RBP eCLIP21.64■■□□□ 1.06
DEPDC5-217ENST00000479261 AQRO60306 1485 aaKnown RBP eCLIP21.63■■□□□ 1.05
DEPDC5-217ENST00000479261 TOP2BQ02880 1626 aa21.61■■□□□ 1.05
DEPDC5-217ENST00000479261 SYNJ1O43426 1573 aa21.61■■□□□ 1.05
DEPDC5-217ENST00000479261 BIVM-ERCC5R4GMW8 1640 aa21.59■■□□□ 1.05
DEPDC5-217ENST00000479261 TDRD9Q8NDG6 1382 aaKnown RBP21.59■■□□□ 1.05
DEPDC5-217ENST00000479261 EIF4G3O43432 1585 aaKnown RBP21.55■■□□□ 1.04
DEPDC5-217ENST00000479261 ABCA10Q8WWZ4 1543 aa21.53■■□□□ 1.04
DEPDC5-217ENST00000479261 WDR97A6NE52 1622 aa21.51■■□□□ 1.03
DEPDC5-217ENST00000479261 OSCARQ8IYS5 282 aa21.44■■□□□ 1.02
DEPDC5-217ENST00000479261 GAPVD1Q14C86 1478 aa21.41■■□□□ 1.02
DEPDC5-217ENST00000479261 ABCA5Q8WWZ7 1642 aa21.4■■□□□ 1.02
DEPDC5-217ENST00000479261 GRIN2BQ13224 1484 aa21.39■■□□□ 1.02
DEPDC5-217ENST00000479261 SNAPC4Q5SXM2 1469 aa21.34■■□□□ 1.01
DEPDC5-217ENST00000479261 MAGI1Q96QZ7 1491 aaPredicted RBP21.32■■□□□ 1
DEPDC5-217ENST00000479261 PBRM1Q86U86 1689 aa21.29■■□□□ 1
DEPDC5-217ENST00000479261 CHD1O14646 1710 aa21.28■■□□□ 1
DEPDC5-217ENST00000479261 SYNJ2O15056 1496 aa21.26■□□□□ 0.99
DEPDC5-217ENST00000479261 ERICH3Q5RHP9 1530 aa21.24■□□□□ 0.99
DEPDC5-217ENST00000479261 IGF1RP08069 1367 aa21.23■□□□□ 0.99
DEPDC5-217ENST00000479261 FBLN2P98095 1184 aa21.23■□□□□ 0.99
DEPDC5-217ENST00000479261 CHMP7Q8WUX9 453 aaPredicted RBP21.23■□□□□ 0.99
DEPDC5-217ENST00000479261 FHAD1B1AJZ9 1412 aa21.18■□□□□ 0.98
DEPDC5-217ENST00000479261 KIF27Q86VH2 1401 aa21.16■□□□□ 0.98
DEPDC5-217ENST00000479261 ADAMTS12P58397 1594 aa21.15■□□□□ 0.98
DEPDC5-217ENST00000479261 CLASP1Q7Z460 1538 aa21.14■□□□□ 0.97
DEPDC5-217ENST00000479261 TRIM41Q8WV44 630 aa21.13■□□□□ 0.97
DEPDC5-217ENST00000479261 GRIN2AQ12879 1464 aa21.13■□□□□ 0.97
DEPDC5-217ENST00000479261 RUSC2Q8N2Y8 1516 aa21.12■□□□□ 0.97
DEPDC5-217ENST00000479261 NUP160Q12769 1436 aa21.1■□□□□ 0.97
DEPDC5-217ENST00000479261 ARHGEF11O15085 1522 aa21.04■□□□□ 0.96
DEPDC5-217ENST00000479261 CEP170Q5SW79 1584 aa21.04■□□□□ 0.96
DEPDC5-217ENST00000479261 RIMBP3CA6NJZ7 1639 aa21.04■□□□□ 0.96
DEPDC5-217ENST00000479261 RIMBP3BA6NNM3 1639 aa21.04■□□□□ 0.96
DEPDC5-217ENST00000479261 RIMBP3Q9UFD9 1639 aa21.04■□□□□ 0.96
DEPDC5-217ENST00000479261 CARMIL1Q5VZK9 1371 aa21.02■□□□□ 0.96
DEPDC5-217ENST00000479261 CHIC1Q5VXU3 224 aa21.02■□□□□ 0.96
DEPDC5-217ENST00000479261 CUL7Q14999 1698 aa20.98■□□□□ 0.95
DEPDC5-217ENST00000479261 SHROOM2Q13796 1616 aa20.91■□□□□ 0.94
DEPDC5-217ENST00000479261 ARAP1Q96P48 1450 aa20.9■□□□□ 0.94
DEPDC5-217ENST00000479261 JPH4Q96JJ6 628 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms