RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 NISCHQ9Y2I1 1504 aa36.27■■■■□ 3.4
COL16A1-211ENST00000479100 CCDC180Q9P1Z9 1646 aa32.3■■■□□ 2.76
COL16A1-211ENST00000479100 ABCC9O60706 1549 aa32.27■■■□□ 2.76
COL16A1-211ENST00000479100 RB1CC1Q8TDY2 1594 aa30.72■■■□□ 2.51
COL16A1-211ENST00000479100 NACADO15069 1562 aa30.6■■■□□ 2.49
COL16A1-211ENST00000479100 DCAF8L2P0C7V8 631 aa30.46■■■□□ 2.47
COL16A1-211ENST00000479100 DNAJC5BQ9UF47 199 aa30.3■■■□□ 2.44
COL16A1-211ENST00000479100 MYO15BQ96JP2 1530 aa30.29■■■□□ 2.44
COL16A1-211ENST00000479100 ZCCHC6Q5VYS8 1495 aaKnown RBP30.25■■■□□ 2.43
COL16A1-211ENST00000479100 PABPN1Q86U42 306 aaKnown RBP eCLIP30.13■■■□□ 2.41
COL16A1-211ENST00000479100 DCAF1Q9Y4B6 1507 aa29.95■■■□□ 2.38
COL16A1-211ENST00000479100 UNC13AQ9UPW8 1703 aa29.91■■■□□ 2.38
COL16A1-211ENST00000479100 BICRAQ9NZM4 1560 aa29.9■■■□□ 2.38
COL16A1-211ENST00000479100 SHROOM4Q9ULL8 1493 aa29.51■■■□□ 2.31
COL16A1-211ENST00000479100 SCRIBQ14160 1630 aa29.45■■■□□ 2.31
COL16A1-211ENST00000479100 EIF4G1Q04637 1599 aaKnown RBP29.13■■■□□ 2.25
COL16A1-211ENST00000479100 CC2D2AQ9P2K1 1620 aa29.12■■■□□ 2.25
COL16A1-211ENST00000479100 CECR2Q9BXF3 1484 aa29.08■■■□□ 2.25
COL16A1-211ENST00000479100 NCAPD3P42695 1498 aa28.34■■■□□ 2.13
COL16A1-211ENST00000479100 ATAD2BQ9ULI0 1458 aa28.25■■■□□ 2.11
COL16A1-211ENST00000479100 SMARCA4P51532 1647 aa28.14■■■□□ 2.1
COL16A1-211ENST00000479100 SMARCA2P51531 1590 aa28.08■■■□□ 2.09
COL16A1-211ENST00000479100 BAZ1AQ9NRL2 1556 aaPredicted RBP28.08■■■□□ 2.09
COL16A1-211ENST00000479100 HMGXB3Q12766 1538 aa28.05■■■□□ 2.08
COL16A1-211ENST00000479100 MROH2BQ7Z745 1585 aa27.98■■■□□ 2.07
COL16A1-211ENST00000479100 PEG3Q9GZU2 1588 aa27.94■■■□□ 2.06
COL16A1-211ENST00000479100 BAZ1BQ9UIG0 1483 aaKnown RBP27.9■■■□□ 2.06
COL16A1-211ENST00000479100 ERCC6Q03468 1493 aa27.81■■■□□ 2.04
COL16A1-211ENST00000479100 NESP48681 1621 aa27.78■■■□□ 2.04
COL16A1-211ENST00000479100 CUX2O14529 1486 aa27.76■■■□□ 2.04
COL16A1-211ENST00000479100 RSF1Q96T23 1441 aaPredicted RBP27.75■■■□□ 2.03
COL16A1-211ENST00000479100 WIZO95785 1651 aa27.69■■■□□ 2.02
COL16A1-211ENST00000479100 DNAJC5Q9H3Z4 198 aa27.69■■■□□ 2.02
COL16A1-211ENST00000479100 LAMC3Q9Y6N6 1575 aa27.56■■■□□ 2
COL16A1-211ENST00000479100 CADPSQ9ULU8 1353 aa27.48■■□□□ 1.99
COL16A1-211ENST00000479100 PDS5BQ9NTI5 1447 aa27.45■■□□□ 1.98
COL16A1-211ENST00000479100 THOC2Q8NI27 1593 aaKnown RBP27.42■■□□□ 1.98
COL16A1-211ENST00000479100 SUPT5HO00267 1087 aaKnown RBP27.4■■□□□ 1.98
COL16A1-211ENST00000479100 TOP2AP11388 1531 aaKnown RBP27.39■■□□□ 1.98
COL16A1-211ENST00000479100 KIF21AQ7Z4S6 1674 aa27.28■■□□□ 1.96
COL16A1-211ENST00000479100 MRC2Q9UBG0 1479 aa27.19■■□□□ 1.94
COL16A1-211ENST00000479100 CFTRP13569 1480 aa27.18■■□□□ 1.94
COL16A1-211ENST00000479100 WDR62O43379 1518 aa27.12■■□□□ 1.93
COL16A1-211ENST00000479100 CCDC88BA6NC98 1476 aa27.11■■□□□ 1.93
COL16A1-211ENST00000479100 FANCD2Q9BXW9 1451 aa27.1■■□□□ 1.93
COL16A1-211ENST00000479100 CEP164Q9UPV0 1460 aa27.08■■□□□ 1.93
COL16A1-211ENST00000479100 URB2Q14146 1524 aaKnown RBP26.88■■□□□ 1.89
COL16A1-211ENST00000479100 PRDM2Q13029 1718 aa26.67■■□□□ 1.86
COL16A1-211ENST00000479100 TOPBP1Q92547 1522 aa26.6■■□□□ 1.85
COL16A1-211ENST00000479100 IFT140Q96RY7 1462 aa26.57■■□□□ 1.84
COL16A1-211ENST00000479100 OSCARQ8IYS5 282 aa26.56■■□□□ 1.84
COL16A1-211ENST00000479100 ZNF608Q9ULD9 1512 aaPredicted RBP26.55■■□□□ 1.84
COL16A1-211ENST00000479100 ABCC8Q09428 1581 aa26.54■■□□□ 1.84
COL16A1-211ENST00000479100 DNMBPQ6XZF7 1577 aa26.47■■□□□ 1.83
COL16A1-211ENST00000479100 TRIM41Q8WV44 630 aa26.43■■□□□ 1.82
COL16A1-211ENST00000479100 POLA1P09884 1462 aaPredicted RBP26.36■■□□□ 1.81
COL16A1-211ENST00000479100 TARBP1Q13395 1621 aaKnown RBP26.32■■□□□ 1.8
COL16A1-211ENST00000479100 AQRO60306 1485 aaKnown RBP eCLIP26.32■■□□□ 1.8
COL16A1-211ENST00000479100 EIF4G3O43432 1585 aaKnown RBP26.3■■□□□ 1.8
COL16A1-211ENST00000479100 RAD54L2Q9Y4B4 1467 aa26.26■■□□□ 1.79
COL16A1-211ENST00000479100 SOGA1O94964 1423 aa26.24■■□□□ 1.79
COL16A1-211ENST00000479100 CUX1P39880 1505 aa26.23■■□□□ 1.79
COL16A1-211ENST00000479100 TDRD9Q8NDG6 1382 aaKnown RBP26.19■■□□□ 1.78
COL16A1-211ENST00000479100 FGD5Q6ZNL6 1462 aa26.18■■□□□ 1.78
COL16A1-211ENST00000479100 WRNQ14191 1432 aaPredicted RBP eCLIP26.18■■□□□ 1.78
COL16A1-211ENST00000479100 RIMBP3CA6NJZ7 1639 aa26.1■■□□□ 1.77
COL16A1-211ENST00000479100 RIMBP3BA6NNM3 1639 aa26.1■■□□□ 1.77
COL16A1-211ENST00000479100 RIMBP3Q9UFD9 1639 aa26.1■■□□□ 1.77
COL16A1-211ENST00000479100 ARHGEF11O15085 1522 aa26.09■■□□□ 1.77
COL16A1-211ENST00000479100 SYNJ1O43426 1573 aa26.07■■□□□ 1.76
COL16A1-211ENST00000479100 FBLN2P98095 1184 aa26.06■■□□□ 1.76
COL16A1-211ENST00000479100 WDR97A6NE52 1622 aa26.04■■□□□ 1.76
COL16A1-211ENST00000479100 TOP2BQ02880 1626 aa26.04■■□□□ 1.76
COL16A1-211ENST00000479100 SNAPC4Q5SXM2 1469 aa26.02■■□□□ 1.76
COL16A1-211ENST00000479100 BIVM-ERCC5R4GMW8 1640 aa26.02■■□□□ 1.76
COL16A1-211ENST00000479100 CHD1O14646 1710 aa26■■□□□ 1.75
COL16A1-211ENST00000479100 GRIN2BQ13224 1484 aa25.98■■□□□ 1.75
COL16A1-211ENST00000479100 MAGI1Q96QZ7 1491 aaPredicted RBP25.96■■□□□ 1.75
COL16A1-211ENST00000479100 CYB5RLQ6IPT4 315 aa25.93■■□□□ 1.74
COL16A1-211ENST00000479100 CHMP7Q8WUX9 453 aaPredicted RBP25.93■■□□□ 1.74
COL16A1-211ENST00000479100 ABCA10Q8WWZ4 1543 aa25.93■■□□□ 1.74
COL16A1-211ENST00000479100 GAPVD1Q14C86 1478 aa25.9■■□□□ 1.74
COL16A1-211ENST00000479100 SYNJ2O15056 1496 aa25.88■■□□□ 1.73
COL16A1-211ENST00000479100 ARAP1Q96P48 1450 aa25.87■■□□□ 1.73
COL16A1-211ENST00000479100 CLASP1Q7Z460 1538 aa25.85■■□□□ 1.73
COL16A1-211ENST00000479100 ABCA5Q8WWZ7 1642 aa25.81■■□□□ 1.72
COL16A1-211ENST00000479100 PBRM1Q86U86 1689 aa25.72■■□□□ 1.71
COL16A1-211ENST00000479100 CHIC1Q5VXU3 224 aa25.65■■□□□ 1.7
COL16A1-211ENST00000479100 GRIN2AQ12879 1464 aa25.64■■□□□ 1.69
COL16A1-211ENST00000479100 KIF27Q86VH2 1401 aa25.63■■□□□ 1.69
COL16A1-211ENST00000479100 NUP160Q12769 1436 aa25.61■■□□□ 1.69
COL16A1-211ENST00000479100 FHAD1B1AJZ9 1412 aa25.6■■□□□ 1.69
COL16A1-211ENST00000479100 ADAMTS12P58397 1594 aa25.6■■□□□ 1.69
COL16A1-211ENST00000479100 ERICH3Q5RHP9 1530 aa25.57■■□□□ 1.68
COL16A1-211ENST00000479100 TRHP20396 242 aaPredicted RBP25.52■■□□□ 1.68
COL16A1-211ENST00000479100 CEP170Q5SW79 1584 aa25.52■■□□□ 1.68
COL16A1-211ENST00000479100 RUSC2Q8N2Y8 1516 aa25.48■■□□□ 1.67
COL16A1-211ENST00000479100 IGF1RP08069 1367 aa25.48■■□□□ 1.67
COL16A1-211ENST00000479100 ERCC6L2Q5T890 1561 aa25.46■■□□□ 1.67
COL16A1-211ENST00000479100 SHROOM2Q13796 1616 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms