RNA–Protein interactions for RNA: ENST00000478864.1

NOTCH2-202, Transcript of notch 2, humanhuman

TSL 3

Gene NOTCH2, Length 520 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-202ENST00000478864 NISCHQ9Y2I1 1504 aa21.25■□□□□ 0.99
NOTCH2-202ENST00000478864 AEBP2Q6ZN18 517 aaPredicted RBP21.24■□□□□ 0.99
NOTCH2-202ENST00000478864 CHIC1Q5VXU3 224 aa20.53■□□□□ 0.88
NOTCH2-202ENST00000478864 ABCC9O60706 1549 aa18.99■□□□□ 0.63
NOTCH2-202ENST00000478864 CCDC180Q9P1Z9 1646 aa18.88■□□□□ 0.61
NOTCH2-202ENST00000478864 SENP3Q9H4L4 574 aaPredicted RBP18.35■□□□□ 0.53
NOTCH2-202ENST00000478864 PHF23Q9BUL5 403 aaPredicted RBP18.03■□□□□ 0.48
NOTCH2-202ENST00000478864 RB1CC1Q8TDY2 1594 aa17.96■□□□□ 0.46
NOTCH2-202ENST00000478864 DNAJC5BQ9UF47 199 aa17.94■□□□□ 0.46
NOTCH2-202ENST00000478864 NACADO15069 1562 aa17.84■□□□□ 0.45
NOTCH2-202ENST00000478864 DCAF8L2P0C7V8 631 aa17.84■□□□□ 0.45
NOTCH2-202ENST00000478864 PABPN1Q86U42 306 aaKnown RBP eCLIP17.71■□□□□ 0.43
NOTCH2-202ENST00000478864 UNC13AQ9UPW8 1703 aa17.71■□□□□ 0.43
NOTCH2-202ENST00000478864 ZCCHC6Q5VYS8 1495 aaKnown RBP17.7■□□□□ 0.42
NOTCH2-202ENST00000478864 MYO15BQ96JP2 1530 aa17.67■□□□□ 0.42
NOTCH2-202ENST00000478864 BICRAQ9NZM4 1560 aa17.59■□□□□ 0.41
NOTCH2-202ENST00000478864 DCAF1Q9Y4B6 1507 aa17.59■□□□□ 0.41
NOTCH2-202ENST00000478864 SCRIBQ14160 1630 aa17.29■□□□□ 0.36
NOTCH2-202ENST00000478864 CC2D2AQ9P2K1 1620 aa17.14■□□□□ 0.33
NOTCH2-202ENST00000478864 SHROOM4Q9ULL8 1493 aa17.12■□□□□ 0.33
NOTCH2-202ENST00000478864 EIF4G1Q04637 1599 aaKnown RBP17.08■□□□□ 0.32
NOTCH2-202ENST00000478864 CECR2Q9BXF3 1484 aa17.05■□□□□ 0.32
NOTCH2-202ENST00000478864 FOXD1Q16676 465 aa16.9■□□□□ 0.3
NOTCH2-202ENST00000478864 PLPPR3Q6T4P5 718 aa16.59■□□□□ 0.25
NOTCH2-202ENST00000478864 NCAPD3P42695 1498 aa16.52■□□□□ 0.23
NOTCH2-202ENST00000478864 ATAD2BQ9ULI0 1458 aa16.5■□□□□ 0.23
NOTCH2-202ENST00000478864 BAZ1AQ9NRL2 1556 aaPredicted RBP16.47■□□□□ 0.23
NOTCH2-202ENST00000478864 SMARCA4P51532 1647 aa16.47■□□□□ 0.23
NOTCH2-202ENST00000478864 SMARCA2P51531 1590 aa16.38■□□□□ 0.21
NOTCH2-202ENST00000478864 HMGXB3Q12766 1538 aa16.36■□□□□ 0.21
NOTCH2-202ENST00000478864 MROH2BQ7Z745 1585 aa16.36■□□□□ 0.21
NOTCH2-202ENST00000478864 NESP48681 1621 aa16.36■□□□□ 0.21
NOTCH2-202ENST00000478864 DNAJC5Q9H3Z4 198 aa16.33■□□□□ 0.2
NOTCH2-202ENST00000478864 PEG3Q9GZU2 1588 aa16.3■□□□□ 0.2
NOTCH2-202ENST00000478864 ERCC6Q03468 1493 aa16.28■□□□□ 0.2
NOTCH2-202ENST00000478864 BAZ1BQ9UIG0 1483 aaKnown RBP16.28■□□□□ 0.2
NOTCH2-202ENST00000478864 CUX2O14529 1486 aa16.25■□□□□ 0.19
NOTCH2-202ENST00000478864 RSF1Q96T23 1441 aaPredicted RBP16.22■□□□□ 0.19
NOTCH2-202ENST00000478864 WIZO95785 1651 aa16.14■□□□□ 0.18
NOTCH2-202ENST00000478864 THOC2Q8NI27 1593 aaKnown RBP16.13■□□□□ 0.17
NOTCH2-202ENST00000478864 KIF21AQ7Z4S6 1674 aa16.11■□□□□ 0.17
NOTCH2-202ENST00000478864 LAMC3Q9Y6N6 1575 aa16.1■□□□□ 0.17
NOTCH2-202ENST00000478864 TOP2AP11388 1531 aaKnown RBP16.02■□□□□ 0.15
NOTCH2-202ENST00000478864 CADPSQ9ULU8 1353 aa16■□□□□ 0.15
NOTCH2-202ENST00000478864 PDS5BQ9NTI5 1447 aa15.98■□□□□ 0.15
NOTCH2-202ENST00000478864 MSH5O43196 834 aa15.96■□□□□ 0.15
NOTCH2-202ENST00000478864 PIAS4Q8N2W9 510 aaPredicted RBP15.91■□□□□ 0.14
NOTCH2-202ENST00000478864 MRC2Q9UBG0 1479 aa15.9■□□□□ 0.14
NOTCH2-202ENST00000478864 WDR62O43379 1518 aa15.88■□□□□ 0.13
NOTCH2-202ENST00000478864 SUPT5HO00267 1087 aaKnown RBP15.87■□□□□ 0.13
NOTCH2-202ENST00000478864 PPP6R1Q9UPN7 881 aa15.86■□□□□ 0.13
NOTCH2-202ENST00000478864 CCDC88BA6NC98 1476 aa15.85■□□□□ 0.13
NOTCH2-202ENST00000478864 ADRA2BP18089 450 aa15.85■□□□□ 0.13
NOTCH2-202ENST00000478864 CFTRP13569 1480 aa15.84■□□□□ 0.13
NOTCH2-202ENST00000478864 FANCD2Q9BXW9 1451 aa15.84■□□□□ 0.13
NOTCH2-202ENST00000478864 CEP164Q9UPV0 1460 aa15.81■□□□□ 0.12
NOTCH2-202ENST00000478864 URB2Q14146 1524 aaKnown RBP15.76■□□□□ 0.11
NOTCH2-202ENST00000478864 PRDM2Q13029 1718 aa15.65■□□□□ 0.1
NOTCH2-202ENST00000478864 TRIM41Q8WV44 630 aa15.61■□□□□ 0.09
NOTCH2-202ENST00000478864 ZNF608Q9ULD9 1512 aaPredicted RBP15.58■□□□□ 0.09
NOTCH2-202ENST00000478864 TOPBP1Q92547 1522 aa15.56■□□□□ 0.08
NOTCH2-202ENST00000478864 OSCARQ8IYS5 282 aa15.53■□□□□ 0.08
NOTCH2-202ENST00000478864 ABCC8Q09428 1581 aa15.52■□□□□ 0.07
NOTCH2-202ENST00000478864 IFT140Q96RY7 1462 aa15.49■□□□□ 0.07
NOTCH2-202ENST00000478864 DNMBPQ6XZF7 1577 aa15.46■□□□□ 0.07
NOTCH2-202ENST00000478864 TARBP1Q13395 1621 aaKnown RBP15.45■□□□□ 0.06
NOTCH2-202ENST00000478864 EIF4G3O43432 1585 aaKnown RBP15.44■□□□□ 0.06
NOTCH2-202ENST00000478864 AQRO60306 1485 aaKnown RBP eCLIP15.42■□□□□ 0.06
NOTCH2-202ENST00000478864 POLA1P09884 1462 aaPredicted RBP15.4■□□□□ 0.06
NOTCH2-202ENST00000478864 RIMBP3CA6NJZ7 1639 aa15.4■□□□□ 0.06
NOTCH2-202ENST00000478864 RIMBP3BA6NNM3 1639 aa15.4■□□□□ 0.06
NOTCH2-202ENST00000478864 RIMBP3Q9UFD9 1639 aa15.4■□□□□ 0.06
NOTCH2-202ENST00000478864 RAD54L2Q9Y4B4 1467 aa15.4■□□□□ 0.06
NOTCH2-202ENST00000478864 CHD1O14646 1710 aa15.35■□□□□ 0.05
NOTCH2-202ENST00000478864 CUX1P39880 1505 aa15.35■□□□□ 0.05
NOTCH2-202ENST00000478864 ARHGEF11O15085 1522 aa15.33■□□□□ 0.05
NOTCH2-202ENST00000478864 TDRD9Q8NDG6 1382 aaKnown RBP15.32■□□□□ 0.04
NOTCH2-202ENST00000478864 SOGA1O94964 1423 aa15.32■□□□□ 0.04
NOTCH2-202ENST00000478864 WRNQ14191 1432 aaPredicted RBP eCLIP15.31■□□□□ 0.04
NOTCH2-202ENST00000478864 FGD5Q6ZNL6 1462 aa15.31■□□□□ 0.04
NOTCH2-202ENST00000478864 FBLN2P98095 1184 aa15.24■□□□□ 0.03
NOTCH2-202ENST00000478864 SNAPC4Q5SXM2 1469 aa15.22■□□□□ 0.03
NOTCH2-202ENST00000478864 CYB5RLQ6IPT4 315 aa15.22■□□□□ 0.03
NOTCH2-202ENST00000478864 WDR97A6NE52 1622 aa15.21■□□□□ 0.03
NOTCH2-202ENST00000478864 TOP2BQ02880 1626 aa15.21■□□□□ 0.03
NOTCH2-202ENST00000478864 ARAP1Q96P48 1450 aa15.21■□□□□ 0.03
NOTCH2-202ENST00000478864 SYNJ1O43426 1573 aa15.19■□□□□ 0.02
NOTCH2-202ENST00000478864 BIVM-ERCC5R4GMW8 1640 aa15.18■□□□□ 0.02
NOTCH2-202ENST00000478864 ABCA10Q8WWZ4 1543 aa15.17■□□□□ 0.02
NOTCH2-202ENST00000478864 CLASP1Q7Z460 1538 aa15.17■□□□□ 0.02
NOTCH2-202ENST00000478864 GRIN2BQ13224 1484 aa15.14■□□□□ 0.01
NOTCH2-202ENST00000478864 GAPVD1Q14C86 1478 aa15.13■□□□□ 0.01
NOTCH2-202ENST00000478864 PBRM1Q86U86 1689 aa15.12■□□□□ 0.01
NOTCH2-202ENST00000478864 MAGI1Q96QZ7 1491 aaPredicted RBP15.12■□□□□ 0.01
NOTCH2-202ENST00000478864 CHMP7Q8WUX9 453 aaPredicted RBP15.11■□□□□ 0.01
NOTCH2-202ENST00000478864 ABCA5Q8WWZ7 1642 aa15.1■□□□□ 0.01
NOTCH2-202ENST00000478864 SYNJ2O15056 1496 aa15.09■□□□□ 0.01
NOTCH2-202ENST00000478864 POTEDQ86YR6 584 aa15.05■□□□□ -0
NOTCH2-202ENST00000478864 ERCC6L2Q5T890 1561 aa15.02■□□□□ -0
NOTCH2-202ENST00000478864 KIF27Q86VH2 1401 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms