RNA–Protein interactions for RNA: ENST00000478466.1

CACNA2D3-209, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 3, humanhuman

TSL 3

Gene CACNA2D3, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D3-209ENST00000478466 NISCHQ9Y2I1 1504 aa30.97■■■□□ 2.55
CACNA2D3-209ENST00000478466 ABCC9O60706 1549 aa27.92■■■□□ 2.06
CACNA2D3-209ENST00000478466 CCDC180Q9P1Z9 1646 aa27.73■■■□□ 2.03
CACNA2D3-209ENST00000478466 RB1CC1Q8TDY2 1594 aa26.52■■□□□ 1.84
CACNA2D3-209ENST00000478466 DNAJC5BQ9UF47 199 aa26.37■■□□□ 1.81
CACNA2D3-209ENST00000478466 NACADO15069 1562 aa26.34■■□□□ 1.81
CACNA2D3-209ENST00000478466 DCAF8L2P0C7V8 631 aa26.33■■□□□ 1.81
CACNA2D3-209ENST00000478466 PABPN1Q86U42 306 aaKnown RBP eCLIP26.07■■□□□ 1.76
CACNA2D3-209ENST00000478466 MYO15BQ96JP2 1530 aa25.98■■□□□ 1.75
CACNA2D3-209ENST00000478466 UNC13AQ9UPW8 1703 aa25.77■■□□□ 1.72
CACNA2D3-209ENST00000478466 BICRAQ9NZM4 1560 aa25.7■■□□□ 1.71
CACNA2D3-209ENST00000478466 ZCCHC6Q5VYS8 1495 aaKnown RBP25.6■■□□□ 1.69
CACNA2D3-209ENST00000478466 DCAF1Q9Y4B6 1507 aa25.58■■□□□ 1.69
CACNA2D3-209ENST00000478466 SHROOM4Q9ULL8 1493 aa25.42■■□□□ 1.66
CACNA2D3-209ENST00000478466 SCRIBQ14160 1630 aa25.26■■□□□ 1.63
CACNA2D3-209ENST00000478466 CECR2Q9BXF3 1484 aa25.19■■□□□ 1.62
CACNA2D3-209ENST00000478466 CC2D2AQ9P2K1 1620 aa25.17■■□□□ 1.62
CACNA2D3-209ENST00000478466 EIF4G1Q04637 1599 aaKnown RBP25.1■■□□□ 1.61
CACNA2D3-209ENST00000478466 NCAPD3P42695 1498 aa24.38■■□□□ 1.49
CACNA2D3-209ENST00000478466 DNAJC5Q9H3Z4 198 aa24.35■■□□□ 1.49
CACNA2D3-209ENST00000478466 ATAD2BQ9ULI0 1458 aa24.25■■□□□ 1.47
CACNA2D3-209ENST00000478466 SMARCA2P51531 1590 aa24.16■■□□□ 1.46
CACNA2D3-209ENST00000478466 ERCC6Q03468 1493 aa24.13■■□□□ 1.45
CACNA2D3-209ENST00000478466 CUX2O14529 1486 aa24.13■■□□□ 1.45
CACNA2D3-209ENST00000478466 SMARCA4P51532 1647 aa24.11■■□□□ 1.45
CACNA2D3-209ENST00000478466 HMGXB3Q12766 1538 aa24.09■■□□□ 1.45
CACNA2D3-209ENST00000478466 BAZ1AQ9NRL2 1556 aaPredicted RBP24.03■■□□□ 1.44
CACNA2D3-209ENST00000478466 BAZ1BQ9UIG0 1483 aaKnown RBP23.99■■□□□ 1.43
CACNA2D3-209ENST00000478466 NESP48681 1621 aa23.94■■□□□ 1.42
CACNA2D3-209ENST00000478466 PEG3Q9GZU2 1588 aa23.91■■□□□ 1.42
CACNA2D3-209ENST00000478466 MROH2BQ7Z745 1585 aa23.84■■□□□ 1.41
CACNA2D3-209ENST00000478466 LAMC3Q9Y6N6 1575 aa23.76■■□□□ 1.39
CACNA2D3-209ENST00000478466 PDS5BQ9NTI5 1447 aa23.72■■□□□ 1.39
CACNA2D3-209ENST00000478466 CADPSQ9ULU8 1353 aa23.65■■□□□ 1.38
CACNA2D3-209ENST00000478466 THOC2Q8NI27 1593 aaKnown RBP23.63■■□□□ 1.37
CACNA2D3-209ENST00000478466 KIF21AQ7Z4S6 1674 aa23.52■■□□□ 1.36
CACNA2D3-209ENST00000478466 WIZO95785 1651 aa23.5■■□□□ 1.35
CACNA2D3-209ENST00000478466 MRC2Q9UBG0 1479 aa23.45■■□□□ 1.34
CACNA2D3-209ENST00000478466 RSF1Q96T23 1441 aaPredicted RBP23.37■■□□□ 1.33
CACNA2D3-209ENST00000478466 WDR62O43379 1518 aa23.35■■□□□ 1.33
CACNA2D3-209ENST00000478466 CEP164Q9UPV0 1460 aa23.33■■□□□ 1.33
CACNA2D3-209ENST00000478466 CFTRP13569 1480 aa23.31■■□□□ 1.32
CACNA2D3-209ENST00000478466 FANCD2Q9BXW9 1451 aa23.31■■□□□ 1.32
CACNA2D3-209ENST00000478466 TOP2AP11388 1531 aaKnown RBP23.23■■□□□ 1.31
CACNA2D3-209ENST00000478466 TRIM41Q8WV44 630 aa23.18■■□□□ 1.3
CACNA2D3-209ENST00000478466 OSCARQ8IYS5 282 aa23.15■■□□□ 1.3
CACNA2D3-209ENST00000478466 URB2Q14146 1524 aaKnown RBP23.1■■□□□ 1.29
CACNA2D3-209ENST00000478466 CCDC88BA6NC98 1476 aa23.03■■□□□ 1.28
CACNA2D3-209ENST00000478466 IFT140Q96RY7 1462 aa22.91■■□□□ 1.26
CACNA2D3-209ENST00000478466 PRDM2Q13029 1718 aa22.88■■□□□ 1.25
CACNA2D3-209ENST00000478466 ABCC8Q09428 1581 aa22.86■■□□□ 1.25
CACNA2D3-209ENST00000478466 TOPBP1Q92547 1522 aa22.85■■□□□ 1.25
CACNA2D3-209ENST00000478466 ZNF608Q9ULD9 1512 aaPredicted RBP22.83■■□□□ 1.25
CACNA2D3-209ENST00000478466 DNMBPQ6XZF7 1577 aa22.72■■□□□ 1.23
CACNA2D3-209ENST00000478466 AQRO60306 1485 aaKnown RBP eCLIP22.66■■□□□ 1.22
CACNA2D3-209ENST00000478466 RIMBP3CA6NJZ7 1639 aa22.64■■□□□ 1.22
CACNA2D3-209ENST00000478466 RIMBP3BA6NNM3 1639 aa22.64■■□□□ 1.22
CACNA2D3-209ENST00000478466 RIMBP3Q9UFD9 1639 aa22.64■■□□□ 1.22
CACNA2D3-209ENST00000478466 EIF4G3O43432 1585 aaKnown RBP22.62■■□□□ 1.21
CACNA2D3-209ENST00000478466 FBLN2P98095 1184 aa22.61■■□□□ 1.21
CACNA2D3-209ENST00000478466 ARHGEF11O15085 1522 aa22.61■■□□□ 1.21
CACNA2D3-209ENST00000478466 POLA1P09884 1462 aaPredicted RBP22.6■■□□□ 1.21
CACNA2D3-209ENST00000478466 TARBP1Q13395 1621 aaKnown RBP22.6■■□□□ 1.21
CACNA2D3-209ENST00000478466 SOGA1O94964 1423 aa22.58■■□□□ 1.21
CACNA2D3-209ENST00000478466 CYB5RLQ6IPT4 315 aa22.58■■□□□ 1.21
CACNA2D3-209ENST00000478466 TDRD9Q8NDG6 1382 aaKnown RBP22.54■■□□□ 1.2
CACNA2D3-209ENST00000478466 RAD54L2Q9Y4B4 1467 aa22.54■■□□□ 1.2
CACNA2D3-209ENST00000478466 CHMP7Q8WUX9 453 aaPredicted RBP22.45■■□□□ 1.18
CACNA2D3-209ENST00000478466 CHD1O14646 1710 aa22.45■■□□□ 1.18
CACNA2D3-209ENST00000478466 FGD5Q6ZNL6 1462 aa22.44■■□□□ 1.18
CACNA2D3-209ENST00000478466 CUX1P39880 1505 aa22.39■■□□□ 1.17
CACNA2D3-209ENST00000478466 WDR97A6NE52 1622 aa22.39■■□□□ 1.17
CACNA2D3-209ENST00000478466 SNAPC4Q5SXM2 1469 aa22.38■■□□□ 1.17
CACNA2D3-209ENST00000478466 ARAP1Q96P48 1450 aa22.37■■□□□ 1.17
CACNA2D3-209ENST00000478466 TRHP20396 242 aaPredicted RBP22.36■■□□□ 1.17
CACNA2D3-209ENST00000478466 GRIN2BQ13224 1484 aa22.35■■□□□ 1.17
CACNA2D3-209ENST00000478466 MAGI1Q96QZ7 1491 aaPredicted RBP22.35■■□□□ 1.17
CACNA2D3-209ENST00000478466 SUPT5HO00267 1087 aaKnown RBP22.34■■□□□ 1.17
CACNA2D3-209ENST00000478466 SYNJ2O15056 1496 aa22.28■■□□□ 1.16
CACNA2D3-209ENST00000478466 SYNJ1O43426 1573 aa22.26■■□□□ 1.15
CACNA2D3-209ENST00000478466 GAPVD1Q14C86 1478 aa22.26■■□□□ 1.15
CACNA2D3-209ENST00000478466 CLASP1Q7Z460 1538 aa22.26■■□□□ 1.15
CACNA2D3-209ENST00000478466 ABCA10Q8WWZ4 1543 aa22.21■■□□□ 1.15
CACNA2D3-209ENST00000478466 WRNQ14191 1432 aaPredicted RBP eCLIP22.16■■□□□ 1.14
CACNA2D3-209ENST00000478466 PBRM1Q86U86 1689 aa22.1■■□□□ 1.13
CACNA2D3-209ENST00000478466 ABCA5Q8WWZ7 1642 aa22.09■■□□□ 1.13
CACNA2D3-209ENST00000478466 GRIN2AQ12879 1464 aa22.03■■□□□ 1.12
CACNA2D3-209ENST00000478466 FHAD1B1AJZ9 1412 aa22■■□□□ 1.11
CACNA2D3-209ENST00000478466 TOP2BQ02880 1626 aa22■■□□□ 1.11
CACNA2D3-209ENST00000478466 NUP160Q12769 1436 aa21.98■■□□□ 1.11
CACNA2D3-209ENST00000478466 BIVM-ERCC5R4GMW8 1640 aa21.95■■□□□ 1.1
CACNA2D3-209ENST00000478466 ADAMTS12P58397 1594 aa21.93■■□□□ 1.1
CACNA2D3-209ENST00000478466 ERICH3Q5RHP9 1530 aa21.92■■□□□ 1.1
CACNA2D3-209ENST00000478466 CEP170Q5SW79 1584 aa21.91■■□□□ 1.1
CACNA2D3-209ENST00000478466 ERCC6L2Q5T890 1561 aa21.89■■□□□ 1.09
CACNA2D3-209ENST00000478466 JPH4Q96JJ6 628 aa21.88■■□□□ 1.09
CACNA2D3-209ENST00000478466 SHROOM2Q13796 1616 aa21.82■■□□□ 1.08
CACNA2D3-209ENST00000478466 PRG4Q92954 1404 aaPredicted RBP21.81■■□□□ 1.08
CACNA2D3-209ENST00000478466 AEBP2Q6ZN18 517 aaPredicted RBP21.8■■□□□ 1.08
CACNA2D3-209ENST00000478466 NPM1P06748 294 aaKnown RBP eCLIP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms