RNA–Protein interactions for RNA: ENST00000478076.5

FAM107B-217, Transcript of family with sequence similarity 107 member B, human

APPRIS P1 TSL 4 BASIC

Gene FAM107B, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM107B-217	ENST00000478076	NISCH	Q9Y2I1	1504 aa		15.1	■□□□□ 0.01
FAM107B-217	ENST00000478076	ABCC9	O60706	1549 aa		13.84	□□□□□ -0.19
FAM107B-217	ENST00000478076	CCDC180	Q9P1Z9	1646 aa		13.65	□□□□□ -0.22
FAM107B-217	ENST00000478076	DNAJC5B	Q9UF47	199 aa		13.13	□□□□□ -0.31
FAM107B-217	ENST00000478076	RB1CC1	Q8TDY2	1594 aa		13.05	□□□□□ -0.32
FAM107B-217	ENST00000478076	UNC13A	Q9UPW8	1703 aa		12.97	□□□□□ -0.33
FAM107B-217	ENST00000478076	DCAF8L2	P0C7V8	631 aa		12.91	□□□□□ -0.34
FAM107B-217	ENST00000478076	NACAD	O15069	1562 aa		12.88	□□□□□ -0.35
FAM107B-217	ENST00000478076	PABPN1	Q86U42	306 aa	Known RBP eCLIP	12.87	□□□□□ -0.35
FAM107B-217	ENST00000478076	BICRA	Q9NZM4	1560 aa		12.73	□□□□□ -0.37
FAM107B-217	ENST00000478076	MYO15B	Q96JP2	1530 aa		12.57	□□□□□ -0.4
FAM107B-217	ENST00000478076	ZCCHC6	Q5VYS8	1495 aa	Known RBP	12.52	□□□□□ -0.41
FAM107B-217	ENST00000478076	SCRIB	Q14160	1630 aa		12.51	□□□□□ -0.41
FAM107B-217	ENST00000478076	CC2D2A	Q9P2K1	1620 aa		12.5	□□□□□ -0.41
FAM107B-217	ENST00000478076	DCAF1	Q9Y4B6	1507 aa		12.45	□□□□□ -0.42
FAM107B-217	ENST00000478076	CECR2	Q9BXF3	1484 aa		12.43	□□□□□ -0.42
FAM107B-217	ENST00000478076	EIF4G1	Q04637	1599 aa	Known RBP	12.39	□□□□□ -0.43
FAM107B-217	ENST00000478076	SHROOM4	Q9ULL8	1493 aa		12.34	□□□□□ -0.43
FAM107B-217	ENST00000478076	DNAJC5	Q9H3Z4	198 aa		12.08	□□□□□ -0.48
FAM107B-217	ENST00000478076	ERCC6	Q03468	1493 aa		11.91	□□□□□ -0.5
FAM107B-217	ENST00000478076	CUX2	O14529	1486 aa		11.88	□□□□□ -0.51
FAM107B-217	ENST00000478076	NES	P48681	1621 aa		11.87	□□□□□ -0.51
FAM107B-217	ENST00000478076	NCAPD3	P42695	1498 aa		11.87	□□□□□ -0.51
FAM107B-217	ENST00000478076	SMARCA4	P51532	1647 aa		11.86	□□□□□ -0.51
FAM107B-217	ENST00000478076	ATAD2B	Q9ULI0	1458 aa		11.85	□□□□□ -0.51
FAM107B-217	ENST00000478076	SMARCA2	P51531	1590 aa		11.8	□□□□□ -0.52
FAM107B-217	ENST00000478076	KIF21A	Q7Z4S6	1674 aa		11.79	□□□□□ -0.52
FAM107B-217	ENST00000478076	HMGXB3	Q12766	1538 aa		11.79	□□□□□ -0.52
FAM107B-217	ENST00000478076	THOC2	Q8NI27	1593 aa	Known RBP	11.75	□□□□□ -0.53
FAM107B-217	ENST00000478076	BAZ1B	Q9UIG0	1483 aa	Known RBP	11.74	□□□□□ -0.53
FAM107B-217	ENST00000478076	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	11.71	□□□□□ -0.53
FAM107B-217	ENST00000478076	MROH2B	Q7Z745	1585 aa		11.68	□□□□□ -0.54
FAM107B-217	ENST00000478076	LAMC3	Q9Y6N6	1575 aa		11.68	□□□□□ -0.54
FAM107B-217	ENST00000478076	PEG3	Q9GZU2	1588 aa		11.67	□□□□□ -0.54
FAM107B-217	ENST00000478076	WIZ	O95785	1651 aa		11.61	□□□□□ -0.55
FAM107B-217	ENST00000478076	TRIM41	Q8WV44	630 aa		11.6	□□□□□ -0.55
FAM107B-217	ENST00000478076	PDS5B	Q9NTI5	1447 aa		11.56	□□□□□ -0.56
FAM107B-217	ENST00000478076	MRC2	Q9UBG0	1479 aa		11.51	□□□□□ -0.57
FAM107B-217	ENST00000478076	CADPS	Q9ULU8	1353 aa		11.51	□□□□□ -0.57
FAM107B-217	ENST00000478076	RSF1	Q96T23	1441 aa	Predicted RBP	11.51	□□□□□ -0.57
FAM107B-217	ENST00000478076	WDR62	O43379	1518 aa		11.49	□□□□□ -0.57
FAM107B-217	ENST00000478076	CEP164	Q9UPV0	1460 aa		11.44	□□□□□ -0.58
FAM107B-217	ENST00000478076	FANCD2	Q9BXW9	1451 aa		11.42	□□□□□ -0.58
FAM107B-217	ENST00000478076	PRDM2	Q13029	1718 aa		11.41	□□□□□ -0.58
FAM107B-217	ENST00000478076	URB2	Q14146	1524 aa	Known RBP	11.37	□□□□□ -0.59
FAM107B-217	ENST00000478076	SUPT5H	O00267	1087 aa	Known RBP	11.37	□□□□□ -0.59
FAM107B-217	ENST00000478076	CFTR	P13569	1480 aa		11.35	□□□□□ -0.59
FAM107B-217	ENST00000478076	OSCAR	Q8IYS5	282 aa		11.34	□□□□□ -0.59
FAM107B-217	ENST00000478076	TOP2A	P11388	1531 aa	Known RBP	11.34	□□□□□ -0.59
FAM107B-217	ENST00000478076	RIMBP3C	A6NJZ7	1639 aa		11.32	□□□□□ -0.6
FAM107B-217	ENST00000478076	RIMBP3B	A6NNM3	1639 aa		11.32	□□□□□ -0.6
FAM107B-217	ENST00000478076	RIMBP3	Q9UFD9	1639 aa		11.32	□□□□□ -0.6
FAM107B-217	ENST00000478076	ZNF608	Q9ULD9	1512 aa	Predicted RBP	11.27	□□□□□ -0.61
FAM107B-217	ENST00000478076	CHD1	O14646	1710 aa		11.26	□□□□□ -0.61
FAM107B-217	ENST00000478076	CCDC88B	A6NC98	1476 aa		11.23	□□□□□ -0.61
FAM107B-217	ENST00000478076	EIF4G3	O43432	1585 aa	Known RBP	11.22	□□□□□ -0.61
FAM107B-217	ENST00000478076	TOPBP1	Q92547	1522 aa		11.2	□□□□□ -0.62
FAM107B-217	ENST00000478076	ARHGEF11	O15085	1522 aa		11.19	□□□□□ -0.62
FAM107B-217	ENST00000478076	IFT140	Q96RY7	1462 aa		11.19	□□□□□ -0.62
FAM107B-217	ENST00000478076	AEBP2	Q6ZN18	517 aa	Predicted RBP	11.16	□□□□□ -0.62
FAM107B-217	ENST00000478076	TARBP1	Q13395	1621 aa	Known RBP	11.16	□□□□□ -0.62
FAM107B-217	ENST00000478076	CYB5RL	Q6IPT4	315 aa		11.15	□□□□□ -0.62
FAM107B-217	ENST00000478076	DNMBP	Q6XZF7	1577 aa		11.15	□□□□□ -0.62
FAM107B-217	ENST00000478076	AQR	O60306	1485 aa	Known RBP eCLIP	11.14	□□□□□ -0.63	6e-7	■□□□□ 11.3
FAM107B-217	ENST00000478076	FBLN2	P98095	1184 aa		11.12	□□□□□ -0.63
FAM107B-217	ENST00000478076	ABCC8	Q09428	1581 aa		11.09	□□□□□ -0.63
FAM107B-217	ENST00000478076	TRH	P20396	242 aa	Predicted RBP	11.09	□□□□□ -0.63
FAM107B-217	ENST00000478076	ARAP1	Q96P48	1450 aa		11.08	□□□□□ -0.64
FAM107B-217	ENST00000478076	RAD54L2	Q9Y4B4	1467 aa		11.08	□□□□□ -0.64
FAM107B-217	ENST00000478076	POLA1	P09884	1462 aa	Predicted RBP	11.07	□□□□□ -0.64
FAM107B-217	ENST00000478076	TDRD9	Q8NDG6	1382 aa	Known RBP	11.04	□□□□□ -0.64
FAM107B-217	ENST00000478076	PBRM1	Q86U86	1689 aa		11.01	□□□□□ -0.65
FAM107B-217	ENST00000478076	SOGA1	O94964	1423 aa		11.01	□□□□□ -0.65
FAM107B-217	ENST00000478076	SNAPC4	Q5SXM2	1469 aa		11	□□□□□ -0.65
FAM107B-217	ENST00000478076	FGD5	Q6ZNL6	1462 aa		11	□□□□□ -0.65
FAM107B-217	ENST00000478076	WDR97	A6NE52	1622 aa		10.99	□□□□□ -0.65
FAM107B-217	ENST00000478076	CLASP1	Q7Z460	1538 aa		10.99	□□□□□ -0.65
FAM107B-217	ENST00000478076	CUX1	P39880	1505 aa		10.98	□□□□□ -0.65
FAM107B-217	ENST00000478076	SYNJ1	O43426	1573 aa		10.96	□□□□□ -0.65
FAM107B-217	ENST00000478076	CHMP7	Q8WUX9	453 aa	Predicted RBP	10.95	□□□□□ -0.66
FAM107B-217	ENST00000478076	GRIN2B	Q13224	1484 aa		10.91	□□□□□ -0.66
FAM107B-217	ENST00000478076	MAGI1	Q96QZ7	1491 aa	Predicted RBP	10.91	□□□□□ -0.66
FAM107B-217	ENST00000478076	SYNJ2	O15056	1496 aa		10.89	□□□□□ -0.67
FAM107B-217	ENST00000478076	CHIC1	Q5VXU3	224 aa		10.89	□□□□□ -0.67
FAM107B-217	ENST00000478076	ERCC6L2	Q5T890	1561 aa		10.89	□□□□□ -0.67
FAM107B-217	ENST00000478076	ABCA5	Q8WWZ7	1642 aa		10.87	□□□□□ -0.67
FAM107B-217	ENST00000478076	GAPVD1	Q14C86	1478 aa		10.87	□□□□□ -0.67
FAM107B-217	ENST00000478076	KIF13A	Q9H1H9	1805 aa		10.84	□□□□□ -0.67
FAM107B-217	ENST00000478076	WRN	Q14191	1432 aa	Predicted RBP eCLIP	10.83	□□□□□ -0.68
FAM107B-217	ENST00000478076	CEP170	Q5SW79	1584 aa		10.82	□□□□□ -0.68
FAM107B-217	ENST00000478076	ABCA10	Q8WWZ4	1543 aa		10.81	□□□□□ -0.68
FAM107B-217	ENST00000478076	ADAMTS12	P58397	1594 aa		10.8	□□□□□ -0.68
FAM107B-217	ENST00000478076	BIVM-ERCC5	R4GMW8	1640 aa		10.79	□□□□□ -0.68
FAM107B-217	ENST00000478076	GRIN2A	Q12879	1464 aa		10.79	□□□□□ -0.68
FAM107B-217	ENST00000478076	TOP2B	Q02880	1626 aa		10.78	□□□□□ -0.68
FAM107B-217	ENST00000478076	SHROOM2	Q13796	1616 aa		10.76	□□□□□ -0.69
FAM107B-217	ENST00000478076	TSPOAP1	O95153	1857 aa		10.75	□□□□□ -0.69
FAM107B-217	ENST00000478076	NUP160	Q12769	1436 aa		10.72	□□□□□ -0.69
FAM107B-217	ENST00000478076	FHAD1	B1AJZ9	1412 aa		10.69	□□□□□ -0.7
FAM107B-217	ENST00000478076	PRG4	Q92954	1404 aa	Predicted RBP	10.68	□□□□□ -0.7

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