RNA–Protein interactions for RNA: ENST00000477950.1

SUN1-230, Transcript of Sad1 and UNC84 domain containing 1, humanhuman

TSL 3

Gene SUN1, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUN1-230ENST00000477950 NISCHQ9Y2I1 1504 aa27.37■■□□□ 1.97
SUN1-230ENST00000477950 CCDC180Q9P1Z9 1646 aa24.61■■□□□ 1.53
SUN1-230ENST00000477950 ABCC9O60706 1549 aa24.56■■□□□ 1.52
SUN1-230ENST00000477950 RB1CC1Q8TDY2 1594 aa23.44■■□□□ 1.34
SUN1-230ENST00000477950 NACADO15069 1562 aa23.29■■□□□ 1.32
SUN1-230ENST00000477950 DCAF8L2P0C7V8 631 aa23.05■■□□□ 1.28
SUN1-230ENST00000477950 DNAJC5BQ9UF47 199 aa23.04■■□□□ 1.28
SUN1-230ENST00000477950 MYO15BQ96JP2 1530 aa23.01■■□□□ 1.27
SUN1-230ENST00000477950 PABPN1Q86U42 306 aaKnown RBP eCLIP22.84■■□□□ 1.25
SUN1-230ENST00000477950 UNC13AQ9UPW8 1703 aa22.82■■□□□ 1.24
SUN1-230ENST00000477950 BICRAQ9NZM4 1560 aa22.7■■□□□ 1.22
SUN1-230ENST00000477950 ZCCHC6Q5VYS8 1495 aaKnown RBP22.68■■□□□ 1.22
SUN1-230ENST00000477950 DCAF1Q9Y4B6 1507 aa22.67■■□□□ 1.22
SUN1-230ENST00000477950 SHROOM4Q9ULL8 1493 aa22.54■■□□□ 1.2
SUN1-230ENST00000477950 SCRIBQ14160 1630 aa22.33■■□□□ 1.17
SUN1-230ENST00000477950 CC2D2AQ9P2K1 1620 aa22.21■■□□□ 1.15
SUN1-230ENST00000477950 EIF4G1Q04637 1599 aaKnown RBP22.17■■□□□ 1.14
SUN1-230ENST00000477950 CECR2Q9BXF3 1484 aa22.17■■□□□ 1.14
SUN1-230ENST00000477950 NCAPD3P42695 1498 aa21.5■■□□□ 1.03
SUN1-230ENST00000477950 ATAD2BQ9ULI0 1458 aa21.39■■□□□ 1.02
SUN1-230ENST00000477950 SMARCA2P51531 1590 aa21.36■■□□□ 1.01
SUN1-230ENST00000477950 SMARCA4P51532 1647 aa21.34■■□□□ 1.01
SUN1-230ENST00000477950 HMGXB3Q12766 1538 aa21.34■■□□□ 1.01
SUN1-230ENST00000477950 CUX2O14529 1486 aa21.28■■□□□ 1
SUN1-230ENST00000477950 DNAJC5Q9H3Z4 198 aa21.28■■□□□ 1
SUN1-230ENST00000477950 BAZ1AQ9NRL2 1556 aaPredicted RBP21.27■■□□□ 1
SUN1-230ENST00000477950 ERCC6Q03468 1493 aa21.26■□□□□ 0.99
SUN1-230ENST00000477950 PEG3Q9GZU2 1588 aa21.19■□□□□ 0.98
SUN1-230ENST00000477950 BAZ1BQ9UIG0 1483 aaKnown RBP21.19■□□□□ 0.98
SUN1-230ENST00000477950 NESP48681 1621 aa21.07■□□□□ 0.96
SUN1-230ENST00000477950 MROH2BQ7Z745 1585 aa21.05■□□□□ 0.96
SUN1-230ENST00000477950 LAMC3Q9Y6N6 1575 aa21.02■□□□□ 0.95
SUN1-230ENST00000477950 THOC2Q8NI27 1593 aaKnown RBP20.91■□□□□ 0.94
SUN1-230ENST00000477950 PDS5BQ9NTI5 1447 aa20.91■□□□□ 0.94
SUN1-230ENST00000477950 CADPSQ9ULU8 1353 aa20.83■□□□□ 0.92
SUN1-230ENST00000477950 KIF21AQ7Z4S6 1674 aa20.8■□□□□ 0.92
SUN1-230ENST00000477950 WIZO95785 1651 aa20.77■□□□□ 0.91
SUN1-230ENST00000477950 MRC2Q9UBG0 1479 aa20.69■□□□□ 0.9
SUN1-230ENST00000477950 WDR62O43379 1518 aa20.65■□□□□ 0.9
SUN1-230ENST00000477950 AEBP2Q6ZN18 517 aaPredicted RBP20.64■□□□□ 0.89
SUN1-230ENST00000477950 RSF1Q96T23 1441 aaPredicted RBP20.62■□□□□ 0.89
SUN1-230ENST00000477950 CEP164Q9UPV0 1460 aa20.61■□□□□ 0.89
SUN1-230ENST00000477950 CFTRP13569 1480 aa20.58■□□□□ 0.89
SUN1-230ENST00000477950 TOP2AP11388 1531 aaKnown RBP20.58■□□□□ 0.88
SUN1-230ENST00000477950 FANCD2Q9BXW9 1451 aa20.56■□□□□ 0.88
SUN1-230ENST00000477950 URB2Q14146 1524 aaKnown RBP20.37■□□□□ 0.85
SUN1-230ENST00000477950 PRDM2Q13029 1718 aa20.34■□□□□ 0.85
SUN1-230ENST00000477950 CCDC88BA6NC98 1476 aa20.31■□□□□ 0.84
SUN1-230ENST00000477950 OSCARQ8IYS5 282 aa20.28■□□□□ 0.84
SUN1-230ENST00000477950 TRIM41Q8WV44 630 aa20.26■□□□□ 0.83
SUN1-230ENST00000477950 IFT140Q96RY7 1462 aa20.22■□□□□ 0.83
SUN1-230ENST00000477950 ABCC8Q09428 1581 aa20.21■□□□□ 0.83
SUN1-230ENST00000477950 TOPBP1Q92547 1522 aa20.17■□□□□ 0.82
SUN1-230ENST00000477950 ZNF608Q9ULD9 1512 aaPredicted RBP20.12■□□□□ 0.81
SUN1-230ENST00000477950 DNMBPQ6XZF7 1577 aa20.11■□□□□ 0.81
SUN1-230ENST00000477950 EIF4G3O43432 1585 aaKnown RBP20.02■□□□□ 0.8
SUN1-230ENST00000477950 TARBP1Q13395 1621 aaKnown RBP19.98■□□□□ 0.79
SUN1-230ENST00000477950 POLA1P09884 1462 aaPredicted RBP19.97■□□□□ 0.79
SUN1-230ENST00000477950 RIMBP3CA6NJZ7 1639 aa19.96■□□□□ 0.79
SUN1-230ENST00000477950 RIMBP3BA6NNM3 1639 aa19.96■□□□□ 0.79
SUN1-230ENST00000477950 RIMBP3Q9UFD9 1639 aa19.96■□□□□ 0.79
SUN1-230ENST00000477950 AQRO60306 1485 aaKnown RBP eCLIP19.93■□□□□ 0.786e-9■■■■■ 45.3
SUN1-230ENST00000477950 ARHGEF11O15085 1522 aa19.92■□□□□ 0.78
SUN1-230ENST00000477950 WDR97A6NE52 1622 aa19.87■□□□□ 0.77
SUN1-230ENST00000477950 SOGA1O94964 1423 aa19.87■□□□□ 0.77
SUN1-230ENST00000477950 CHD1O14646 1710 aa19.85■□□□□ 0.77
SUN1-230ENST00000477950 RAD54L2Q9Y4B4 1467 aa19.85■□□□□ 0.77
SUN1-230ENST00000477950 FGD5Q6ZNL6 1462 aa19.82■□□□□ 0.76
SUN1-230ENST00000477950 TDRD9Q8NDG6 1382 aaKnown RBP19.82■□□□□ 0.76
SUN1-230ENST00000477950 FBLN2P98095 1184 aa19.81■□□□□ 0.76
SUN1-230ENST00000477950 CUX1P39880 1505 aa19.78■□□□□ 0.76
SUN1-230ENST00000477950 CYB5RLQ6IPT4 315 aa19.76■□□□□ 0.75
SUN1-230ENST00000477950 MAGI1Q96QZ7 1491 aaPredicted RBP19.75■□□□□ 0.75
SUN1-230ENST00000477950 SNAPC4Q5SXM2 1469 aa19.74■□□□□ 0.75
SUN1-230ENST00000477950 GRIN2BQ13224 1484 aa19.73■□□□□ 0.75
SUN1-230ENST00000477950 CHMP7Q8WUX9 453 aaPredicted RBP19.71■□□□□ 0.75
SUN1-230ENST00000477950 ARAP1Q96P48 1450 aa19.71■□□□□ 0.75
SUN1-230ENST00000477950 SYNJ1O43426 1573 aa19.68■□□□□ 0.74
SUN1-230ENST00000477950 SYNJ2O15056 1496 aa19.67■□□□□ 0.74
SUN1-230ENST00000477950 CLASP1Q7Z460 1538 aa19.67■□□□□ 0.74
SUN1-230ENST00000477950 CHIC1Q5VXU3 224 aa19.67■□□□□ 0.74
SUN1-230ENST00000477950 GAPVD1Q14C86 1478 aa19.64■□□□□ 0.73
SUN1-230ENST00000477950 ABCA10Q8WWZ4 1543 aa19.63■□□□□ 0.73
SUN1-230ENST00000477950 SUPT5HO00267 1087 aaKnown RBP19.62■□□□□ 0.73
SUN1-230ENST00000477950 PBRM1Q86U86 1689 aa19.59■□□□□ 0.73
SUN1-230ENST00000477950 ABCA5Q8WWZ7 1642 aa19.58■□□□□ 0.72
SUN1-230ENST00000477950 TRHP20396 242 aaPredicted RBP19.55■□□□□ 0.72
SUN1-230ENST00000477950 WRNQ14191 1432 aaPredicted RBP eCLIP19.55■□□□□ 0.72
SUN1-230ENST00000477950 TOP2BQ02880 1626 aa19.49■□□□□ 0.71
SUN1-230ENST00000477950 BIVM-ERCC5R4GMW8 1640 aa19.48■□□□□ 0.71
SUN1-230ENST00000477950 GRIN2AQ12879 1464 aa19.46■□□□□ 0.71
SUN1-230ENST00000477950 ADAMTS12P58397 1594 aa19.43■□□□□ 0.7
SUN1-230ENST00000477950 NUP160Q12769 1436 aa19.42■□□□□ 0.7
SUN1-230ENST00000477950 FHAD1B1AJZ9 1412 aa19.41■□□□□ 0.7
SUN1-230ENST00000477950 ERICH3Q5RHP9 1530 aa19.4■□□□□ 0.7
SUN1-230ENST00000477950 CEP170Q5SW79 1584 aa19.36■□□□□ 0.69
SUN1-230ENST00000477950 SHROOM2Q13796 1616 aa19.31■□□□□ 0.68
SUN1-230ENST00000477950 ERCC6L2Q5T890 1561 aa19.29■□□□□ 0.68
SUN1-230ENST00000477950 PRG4Q92954 1404 aaPredicted RBP19.2■□□□□ 0.66
SUN1-230ENST00000477950 JPH4Q96JJ6 628 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms