RNA–Protein interactions for RNA: ENST00000477817.1

PKP1-205, Transcript of plakophilin 1, humanhuman

TSL 1 (best)

Gene PKP1, Length 631 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-205ENST00000477817 NISCHQ9Y2I1 1504 aa29.23■■■□□ 2.27
PKP1-205ENST00000477817 ABCC9O60706 1549 aa27.3■■□□□ 1.96
PKP1-205ENST00000477817 CCDC180Q9P1Z9 1646 aa26.53■■□□□ 1.84
PKP1-205ENST00000477817 DNAJC5BQ9UF47 199 aa26.08■■□□□ 1.77
PKP1-205ENST00000477817 RB1CC1Q8TDY2 1594 aa25.65■■□□□ 1.7
PKP1-205ENST00000477817 PABPN1Q86U42 306 aaKnown RBP eCLIP25.34■■□□□ 1.65
PKP1-205ENST00000477817 DCAF8L2P0C7V8 631 aa25.29■■□□□ 1.64
PKP1-205ENST00000477817 NACADO15069 1562 aa25.26■■□□□ 1.63
PKP1-205ENST00000477817 UNC13AQ9UPW8 1703 aa25.01■■□□□ 1.59
PKP1-205ENST00000477817 BICRAQ9NZM4 1560 aa24.8■■□□□ 1.56
PKP1-205ENST00000477817 CECR2Q9BXF3 1484 aa24.64■■□□□ 1.53
PKP1-205ENST00000477817 MYO15BQ96JP2 1530 aa24.57■■□□□ 1.52
PKP1-205ENST00000477817 CC2D2AQ9P2K1 1620 aa24.57■■□□□ 1.52
PKP1-205ENST00000477817 DNAJC5Q9H3Z4 198 aa24.5■■□□□ 1.51
PKP1-205ENST00000477817 SHROOM4Q9ULL8 1493 aa24.4■■□□□ 1.5
PKP1-205ENST00000477817 EIF4G1Q04637 1599 aaKnown RBP24.32■■□□□ 1.48
PKP1-205ENST00000477817 SCRIBQ14160 1630 aa24.24■■□□□ 1.47
PKP1-205ENST00000477817 ZCCHC6Q5VYS8 1495 aaKnown RBP24.05■■□□□ 1.44
PKP1-205ENST00000477817 DCAF1Q9Y4B6 1507 aa24.03■■□□□ 1.44
PKP1-205ENST00000477817 CUX2O14529 1486 aa23.74■■□□□ 1.39
PKP1-205ENST00000477817 ERCC6Q03468 1493 aa23.69■■□□□ 1.38
PKP1-205ENST00000477817 TRIM41Q8WV44 630 aa23.35■■□□□ 1.33
PKP1-205ENST00000477817 NCAPD3P42695 1498 aa23.28■■□□□ 1.32
PKP1-205ENST00000477817 NESP48681 1621 aa23.2■■□□□ 1.3
PKP1-205ENST00000477817 ATAD2BQ9ULI0 1458 aa23.14■■□□□ 1.29
PKP1-205ENST00000477817 SMARCA2P51531 1590 aa23.09■■□□□ 1.29
PKP1-205ENST00000477817 HMGXB3Q12766 1538 aa23.06■■□□□ 1.28
PKP1-205ENST00000477817 THOC2Q8NI27 1593 aaKnown RBP23.05■■□□□ 1.28
PKP1-205ENST00000477817 BAZ1BQ9UIG0 1483 aaKnown RBP22.98■■□□□ 1.27
PKP1-205ENST00000477817 SMARCA4P51532 1647 aa22.97■■□□□ 1.27
PKP1-205ENST00000477817 LAMC3Q9Y6N6 1575 aa22.93■■□□□ 1.26
PKP1-205ENST00000477817 KIF21AQ7Z4S6 1674 aa22.9■■□□□ 1.26
PKP1-205ENST00000477817 PDS5BQ9NTI5 1447 aa22.87■■□□□ 1.25
PKP1-205ENST00000477817 BAZ1AQ9NRL2 1556 aaPredicted RBP22.79■■□□□ 1.24
PKP1-205ENST00000477817 MRC2Q9UBG0 1479 aa22.68■■□□□ 1.22
PKP1-205ENST00000477817 PEG3Q9GZU2 1588 aa22.66■■□□□ 1.22
PKP1-205ENST00000477817 OSCARQ8IYS5 282 aa22.65■■□□□ 1.22
PKP1-205ENST00000477817 CADPSQ9ULU8 1353 aa22.6■■□□□ 1.21
PKP1-205ENST00000477817 WDR62O43379 1518 aa22.58■■□□□ 1.21
PKP1-205ENST00000477817 MROH2BQ7Z745 1585 aa22.52■■□□□ 1.2
PKP1-205ENST00000477817 CEP164Q9UPV0 1460 aa22.48■■□□□ 1.19
PKP1-205ENST00000477817 FANCD2Q9BXW9 1451 aa22.38■■□□□ 1.17
PKP1-205ENST00000477817 RIMBP3CA6NJZ7 1639 aa22.35■■□□□ 1.17
PKP1-205ENST00000477817 RIMBP3BA6NNM3 1639 aa22.35■■□□□ 1.17
PKP1-205ENST00000477817 RIMBP3Q9UFD9 1639 aa22.35■■□□□ 1.17
PKP1-205ENST00000477817 TRHP20396 242 aaPredicted RBP22.29■■□□□ 1.16
PKP1-205ENST00000477817 WIZO95785 1651 aa22.28■■□□□ 1.16
PKP1-205ENST00000477817 CYB5RLQ6IPT4 315 aa22.2■■□□□ 1.14
PKP1-205ENST00000477817 ARHGEF11O15085 1522 aa22.2■■□□□ 1.14
PKP1-205ENST00000477817 URB2Q14146 1524 aaKnown RBP22.18■■□□□ 1.14
PKP1-205ENST00000477817 AEBP2Q6ZN18 517 aaPredicted RBP22.18■■□□□ 1.14
PKP1-205ENST00000477817 CFTRP13569 1480 aa22.15■■□□□ 1.14
PKP1-205ENST00000477817 ZNF608Q9ULD9 1512 aaPredicted RBP22.04■■□□□ 1.12
PKP1-205ENST00000477817 IFT140Q96RY7 1462 aa22.03■■□□□ 1.12
PKP1-205ENST00000477817 FBLN2P98095 1184 aa21.98■■□□□ 1.11
PKP1-205ENST00000477817 PRDM2Q13029 1718 aa21.94■■□□□ 1.1
PKP1-205ENST00000477817 TOP2AP11388 1531 aaKnown RBP21.91■■□□□ 1.1
PKP1-205ENST00000477817 CHD1O14646 1710 aa21.91■■□□□ 1.1
PKP1-205ENST00000477817 EIF4G3O43432 1585 aaKnown RBP21.91■■□□□ 1.1
PKP1-205ENST00000477817 ARAP1Q96P48 1450 aa21.9■■□□□ 1.1
PKP1-205ENST00000477817 TOPBP1Q92547 1522 aa21.85■■□□□ 1.09
PKP1-205ENST00000477817 RSF1Q96T23 1441 aaPredicted RBP21.81■■□□□ 1.08
PKP1-205ENST00000477817 AQRO60306 1485 aaKnown RBP eCLIP21.79■■□□□ 1.08
PKP1-205ENST00000477817 ABCC8Q09428 1581 aa21.78■■□□□ 1.08
PKP1-205ENST00000477817 DNMBPQ6XZF7 1577 aa21.72■■□□□ 1.07
PKP1-205ENST00000477817 CCDC88BA6NC98 1476 aa21.68■■□□□ 1.06
PKP1-205ENST00000477817 TARBP1Q13395 1621 aaKnown RBP21.66■■□□□ 1.06
PKP1-205ENST00000477817 CHMP7Q8WUX9 453 aaPredicted RBP21.64■■□□□ 1.05
PKP1-205ENST00000477817 TDRD9Q8NDG6 1382 aaKnown RBP21.59■■□□□ 1.05
PKP1-205ENST00000477817 SYNJ1O43426 1573 aa21.58■■□□□ 1.05
PKP1-205ENST00000477817 POLA1P09884 1462 aaPredicted RBP21.58■■□□□ 1.04
PKP1-205ENST00000477817 SNAPC4Q5SXM2 1469 aa21.56■■□□□ 1.04
PKP1-205ENST00000477817 RAD54L2Q9Y4B4 1467 aa21.55■■□□□ 1.04
PKP1-205ENST00000477817 SOGA1O94964 1423 aa21.54■■□□□ 1.04
PKP1-205ENST00000477817 CLASP1Q7Z460 1538 aa21.53■■□□□ 1.04
PKP1-205ENST00000477817 GAPVD1Q14C86 1478 aa21.45■■□□□ 1.03
PKP1-205ENST00000477817 MAGI1Q96QZ7 1491 aaPredicted RBP21.44■■□□□ 1.02
PKP1-205ENST00000477817 WDR97A6NE52 1622 aa21.4■■□□□ 1.02
PKP1-205ENST00000477817 SYNJ2O15056 1496 aa21.39■■□□□ 1.02
PKP1-205ENST00000477817 GRIN2BQ13224 1484 aa21.39■■□□□ 1.02
PKP1-205ENST00000477817 FGD5Q6ZNL6 1462 aa21.38■■□□□ 1.01
PKP1-205ENST00000477817 PBRM1Q86U86 1689 aa21.28■■□□□ 1
PKP1-205ENST00000477817 CUX1P39880 1505 aa21.19■□□□□ 0.98
PKP1-205ENST00000477817 ERCC6L2Q5T890 1561 aa21.19■□□□□ 0.98
PKP1-205ENST00000477817 KIF13AQ9H1H9 1805 aa21.13■□□□□ 0.97
PKP1-205ENST00000477817 ILDR1Q86SU0 546 aaPredicted RBP21.12■□□□□ 0.97
PKP1-205ENST00000477817 CEP170Q5SW79 1584 aa21.11■□□□□ 0.97
PKP1-205ENST00000477817 GRIN2AQ12879 1464 aa21.1■□□□□ 0.97
PKP1-205ENST00000477817 NPM1P06748 294 aaKnown RBP eCLIP21.08■□□□□ 0.97
PKP1-205ENST00000477817 FAM69CQ0P6D2 419 aa21.08■□□□□ 0.97
PKP1-205ENST00000477817 ABCA5Q8WWZ7 1642 aa21.07■□□□□ 0.96
PKP1-205ENST00000477817 ABCA10Q8WWZ4 1543 aa21.04■□□□□ 0.96
PKP1-205ENST00000477817 NUP160Q12769 1436 aa20.99■□□□□ 0.95
PKP1-205ENST00000477817 ADAMTS12P58397 1594 aa20.98■□□□□ 0.95
PKP1-205ENST00000477817 SHROOM2Q13796 1616 aa20.97■□□□□ 0.95
PKP1-205ENST00000477817 KDM4FA0A1W2PPD8 638 aa20.97■□□□□ 0.95
PKP1-205ENST00000477817 PRG4Q92954 1404 aaPredicted RBP20.96■□□□□ 0.95
PKP1-205ENST00000477817 KDM6BO15054 1643 aa20.95■□□□□ 0.94
PKP1-205ENST00000477817 FHAD1B1AJZ9 1412 aa20.93■□□□□ 0.94
PKP1-205ENST00000477817 ABCC10Q5T3U5 1492 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms