RNA–Protein interactions for RNA: ENST00000477696.5

CD40-205, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 771 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-205ENST00000477696 NISCHQ9Y2I1 1504 aa21.04■□□□□ 0.96
CD40-205ENST00000477696 CCDC180Q9P1Z9 1646 aa19.03■□□□□ 0.64
CD40-205ENST00000477696 ABCC9O60706 1549 aa18.77■□□□□ 0.6
CD40-205ENST00000477696 RB1CC1Q8TDY2 1594 aa17.99■□□□□ 0.47
CD40-205ENST00000477696 NACADO15069 1562 aa17.88■□□□□ 0.45
CD40-205ENST00000477696 UNC13AQ9UPW8 1703 aa17.72■□□□□ 0.43
CD40-205ENST00000477696 MYO15BQ96JP2 1530 aa17.69■□□□□ 0.42
CD40-205ENST00000477696 DCAF8L2P0C7V8 631 aa17.57■□□□□ 0.4
CD40-205ENST00000477696 DNAJC5BQ9UF47 199 aa17.52■□□□□ 0.4
CD40-205ENST00000477696 BICRAQ9NZM4 1560 aa17.5■□□□□ 0.39
CD40-205ENST00000477696 ZCCHC6Q5VYS8 1495 aaKnown RBP17.49■□□□□ 0.39
CD40-205ENST00000477696 AEBP2Q6ZN18 517 aaPredicted RBP17.48■□□□□ 0.39
CD40-205ENST00000477696 DCAF1Q9Y4B6 1507 aa17.46■□□□□ 0.39
CD40-205ENST00000477696 PABPN1Q86U42 306 aaKnown RBP eCLIP17.36■□□□□ 0.37
CD40-205ENST00000477696 SHROOM4Q9ULL8 1493 aa17.31■□□□□ 0.36
CD40-205ENST00000477696 SCRIBQ14160 1630 aa17.2■□□□□ 0.34
CD40-205ENST00000477696 CC2D2AQ9P2K1 1620 aa17.06■□□□□ 0.32
CD40-205ENST00000477696 EIF4G1Q04637 1599 aaKnown RBP17.04■□□□□ 0.32
CD40-205ENST00000477696 CECR2Q9BXF3 1484 aa16.93■□□□□ 0.3
CD40-205ENST00000477696 SMARCA4P51532 1647 aa16.46■□□□□ 0.23
CD40-205ENST00000477696 NCAPD3P42695 1498 aa16.46■□□□□ 0.23
CD40-205ENST00000477696 HMGXB3Q12766 1538 aa16.42■□□□□ 0.22
CD40-205ENST00000477696 ATAD2BQ9ULI0 1458 aa16.4■□□□□ 0.22
CD40-205ENST00000477696 SMARCA2P51531 1590 aa16.39■□□□□ 0.21
CD40-205ENST00000477696 BAZ1AQ9NRL2 1556 aaPredicted RBP16.35■□□□□ 0.21
CD40-205ENST00000477696 PEG3Q9GZU2 1588 aa16.34■□□□□ 0.21
CD40-205ENST00000477696 DNAJC5Q9H3Z4 198 aa16.32■□□□□ 0.2
CD40-205ENST00000477696 CHIC1Q5VXU3 224 aa16.28■□□□□ 0.2
CD40-205ENST00000477696 CUX2O14529 1486 aa16.26■□□□□ 0.19
CD40-205ENST00000477696 BAZ1BQ9UIG0 1483 aaKnown RBP16.23■□□□□ 0.19
CD40-205ENST00000477696 MROH2BQ7Z745 1585 aa16.19■□□□□ 0.18
CD40-205ENST00000477696 ERCC6Q03468 1493 aa16.19■□□□□ 0.18
CD40-205ENST00000477696 NESP48681 1621 aa16.16■□□□□ 0.18
CD40-205ENST00000477696 LAMC3Q9Y6N6 1575 aa16.14■□□□□ 0.17
CD40-205ENST00000477696 THOC2Q8NI27 1593 aaKnown RBP16.13■□□□□ 0.17
CD40-205ENST00000477696 KIF21AQ7Z4S6 1674 aa16.08■□□□□ 0.17
CD40-205ENST00000477696 WIZO95785 1651 aa16.05■□□□□ 0.16
CD40-205ENST00000477696 PDS5BQ9NTI5 1447 aa15.94■□□□□ 0.14
CD40-205ENST00000477696 RSF1Q96T23 1441 aaPredicted RBP15.9■□□□□ 0.14
CD40-205ENST00000477696 CADPSQ9ULU8 1353 aa15.89■□□□□ 0.13
CD40-205ENST00000477696 WDR62O43379 1518 aa15.88■□□□□ 0.13
CD40-205ENST00000477696 MRC2Q9UBG0 1479 aa15.85■□□□□ 0.13
CD40-205ENST00000477696 TOP2AP11388 1531 aaKnown RBP15.85■□□□□ 0.13
CD40-205ENST00000477696 PRDM2Q13029 1718 aa15.83■□□□□ 0.13
CD40-205ENST00000477696 CFTRP13569 1480 aa15.78■□□□□ 0.12
CD40-205ENST00000477696 CEP164Q9UPV0 1460 aa15.78■□□□□ 0.12
CD40-205ENST00000477696 FANCD2Q9BXW9 1451 aa15.75■□□□□ 0.11
CD40-205ENST00000477696 URB2Q14146 1524 aaKnown RBP15.65■□□□□ 0.1
CD40-205ENST00000477696 CCDC88BA6NC98 1476 aa15.59■□□□□ 0.09
CD40-205ENST00000477696 TRIM41Q8WV44 630 aa15.48■□□□□ 0.07
CD40-205ENST00000477696 TOPBP1Q92547 1522 aa15.48■□□□□ 0.07
CD40-205ENST00000477696 DNMBPQ6XZF7 1577 aa15.47■□□□□ 0.07
CD40-205ENST00000477696 IFT140Q96RY7 1462 aa15.46■□□□□ 0.06
CD40-205ENST00000477696 ABCC8Q09428 1581 aa15.45■□□□□ 0.06
CD40-205ENST00000477696 SUPT5HO00267 1087 aaKnown RBP15.44■□□□□ 0.06
CD40-205ENST00000477696 EIF4G3O43432 1585 aaKnown RBP15.44■□□□□ 0.06
CD40-205ENST00000477696 ZNF608Q9ULD9 1512 aaPredicted RBP15.42■□□□□ 0.06
CD40-205ENST00000477696 TARBP1Q13395 1621 aaKnown RBP15.41■□□□□ 0.06
CD40-205ENST00000477696 CHD1O14646 1710 aa15.34■□□□□ 0.05
CD40-205ENST00000477696 OSCARQ8IYS5 282 aa15.34■□□□□ 0.05
CD40-205ENST00000477696 RIMBP3CA6NJZ7 1639 aa15.34■□□□□ 0.05
CD40-205ENST00000477696 RIMBP3BA6NNM3 1639 aa15.34■□□□□ 0.05
CD40-205ENST00000477696 RIMBP3Q9UFD9 1639 aa15.34■□□□□ 0.05
CD40-205ENST00000477696 POLA1P09884 1462 aaPredicted RBP15.33■□□□□ 0.04
CD40-205ENST00000477696 WDR97A6NE52 1622 aa15.31■□□□□ 0.04
CD40-205ENST00000477696 ARHGEF11O15085 1522 aa15.25■□□□□ 0.03
CD40-205ENST00000477696 CUX1P39880 1505 aa15.23■□□□□ 0.03
CD40-205ENST00000477696 AQRO60306 1485 aaKnown RBP eCLIP15.23■□□□□ 0.03
CD40-205ENST00000477696 FGD5Q6ZNL6 1462 aa15.21■□□□□ 0.03
CD40-205ENST00000477696 RAD54L2Q9Y4B4 1467 aa15.2■□□□□ 0.02
CD40-205ENST00000477696 PBRM1Q86U86 1689 aa15.18■□□□□ 0.02
CD40-205ENST00000477696 SOGA1O94964 1423 aa15.16■□□□□ 0.02
CD40-205ENST00000477696 CLASP1Q7Z460 1538 aa15.14■□□□□ 0.01
CD40-205ENST00000477696 SNAPC4Q5SXM2 1469 aa15.14■□□□□ 0.01
CD40-205ENST00000477696 ABCA5Q8WWZ7 1642 aa15.13■□□□□ 0.01
CD40-205ENST00000477696 MAGI1Q96QZ7 1491 aaPredicted RBP15.13■□□□□ 0.01
CD40-205ENST00000477696 TDRD9Q8NDG6 1382 aaKnown RBP15.11■□□□□ 0.01
CD40-205ENST00000477696 ARAP1Q96P48 1450 aa15.1■□□□□ 0.01
CD40-205ENST00000477696 SYNJ1O43426 1573 aa15.1■□□□□ 0.01
CD40-205ENST00000477696 GRIN2BQ13224 1484 aa15.09■□□□□ 0.01
CD40-205ENST00000477696 BIVM-ERCC5R4GMW8 1640 aa15.09■□□□□ 0.01
CD40-205ENST00000477696 ABCA10Q8WWZ4 1543 aa15.07■□□□□ 0
CD40-205ENST00000477696 SYNJ2O15056 1496 aa15.06■□□□□ 0
CD40-205ENST00000477696 TOP2BQ02880 1626 aa15.03■□□□□ -0
CD40-205ENST00000477696 GAPVD1Q14C86 1478 aa15.03■□□□□ -0
CD40-205ENST00000477696 WRNQ14191 1432 aaPredicted RBP eCLIP15.01□□□□□ -0.01
CD40-205ENST00000477696 ADAMTS12P58397 1594 aa14.99□□□□□ -0.01
CD40-205ENST00000477696 FBLN2P98095 1184 aa14.98□□□□□ -0.01
CD40-205ENST00000477696 CYB5RLQ6IPT4 315 aa14.94□□□□□ -0.02
CD40-205ENST00000477696 CHMP7Q8WUX9 453 aaPredicted RBP14.93□□□□□ -0.02
CD40-205ENST00000477696 GRIN2AQ12879 1464 aa14.92□□□□□ -0.02
CD40-205ENST00000477696 CEP170Q5SW79 1584 aa14.91□□□□□ -0.02
CD40-205ENST00000477696 SHROOM2Q13796 1616 aa14.91□□□□□ -0.02
CD40-205ENST00000477696 SENP3Q9H4L4 574 aaPredicted RBP14.9□□□□□ -0.02
CD40-205ENST00000477696 ERICH3Q5RHP9 1530 aa14.9□□□□□ -0.02
CD40-205ENST00000477696 NUP160Q12769 1436 aa14.89□□□□□ -0.03
CD40-205ENST00000477696 ERCC6L2Q5T890 1561 aa14.85□□□□□ -0.03
CD40-205ENST00000477696 FHAD1B1AJZ9 1412 aa14.84□□□□□ -0.03
CD40-205ENST00000477696 RUSC2Q8N2Y8 1516 aa14.8□□□□□ -0.04
CD40-205ENST00000477696 TRHP20396 242 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 169.2 ms