RNA–Protein interactions for RNA: ENST00000477546.5

TRAIP-206, Transcript of TRAF interacting protein, humanhuman

TSL 2

Gene TRAIP, Length 1,175 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-206ENST00000477546 NISCHQ9Y2I1 1504 aa27.05■■□□□ 1.92
TRAIP-206ENST00000477546 ABCC9O60706 1549 aa25.58■■□□□ 1.68
TRAIP-206ENST00000477546 DNAJC5BQ9UF47 199 aa24.83■■□□□ 1.57
TRAIP-206ENST00000477546 CCDC180Q9P1Z9 1646 aa24.65■■□□□ 1.54
TRAIP-206ENST00000477546 RB1CC1Q8TDY2 1594 aa23.95■■□□□ 1.42
TRAIP-206ENST00000477546 PABPN1Q86U42 306 aaKnown RBP eCLIP23.65■■□□□ 1.38
TRAIP-206ENST00000477546 NACADO15069 1562 aa23.57■■□□□ 1.36
TRAIP-206ENST00000477546 DNAJC5Q9H3Z4 198 aa23.52■■□□□ 1.36
TRAIP-206ENST00000477546 UNC13AQ9UPW8 1703 aa23.29■■□□□ 1.32
TRAIP-206ENST00000477546 BICRAQ9NZM4 1560 aa23.27■■□□□ 1.32
TRAIP-206ENST00000477546 DCAF8L2P0C7V8 631 aa23.17■■□□□ 1.3
TRAIP-206ENST00000477546 CECR2Q9BXF3 1484 aa23.17■■□□□ 1.3
TRAIP-206ENST00000477546 CC2D2AQ9P2K1 1620 aa23.04■■□□□ 1.28
TRAIP-206ENST00000477546 MYO15BQ96JP2 1530 aa22.98■■□□□ 1.27
TRAIP-206ENST00000477546 SHROOM4Q9ULL8 1493 aa22.95■■□□□ 1.26
TRAIP-206ENST00000477546 EIF4G1Q04637 1599 aaKnown RBP22.79■■□□□ 1.24
TRAIP-206ENST00000477546 CUX2O14529 1486 aa22.49■■□□□ 1.19
TRAIP-206ENST00000477546 SCRIBQ14160 1630 aa22.38■■□□□ 1.17
TRAIP-206ENST00000477546 DCAF1Q9Y4B6 1507 aa22.32■■□□□ 1.16
TRAIP-206ENST00000477546 ZCCHC6Q5VYS8 1495 aaKnown RBP22.23■■□□□ 1.15
TRAIP-206ENST00000477546 ERCC6Q03468 1493 aa22.17■■□□□ 1.14
TRAIP-206ENST00000477546 TRIM41Q8WV44 630 aa22.05■■□□□ 1.12
TRAIP-206ENST00000477546 NCAPD3P42695 1498 aa21.79■■□□□ 1.08
TRAIP-206ENST00000477546 NESP48681 1621 aa21.69■■□□□ 1.06
TRAIP-206ENST00000477546 THOC2Q8NI27 1593 aaKnown RBP21.67■■□□□ 1.06
TRAIP-206ENST00000477546 ATAD2BQ9ULI0 1458 aa21.58■■□□□ 1.04
TRAIP-206ENST00000477546 HMGXB3Q12766 1538 aa21.54■■□□□ 1.04
TRAIP-206ENST00000477546 SMARCA2P51531 1590 aa21.47■■□□□ 1.03
TRAIP-206ENST00000477546 LAMC3Q9Y6N6 1575 aa21.42■■□□□ 1.02
TRAIP-206ENST00000477546 PDS5BQ9NTI5 1447 aa21.36■■□□□ 1.01
TRAIP-206ENST00000477546 KIF21AQ7Z4S6 1674 aa21.33■■□□□ 1
TRAIP-206ENST00000477546 BAZ1BQ9UIG0 1483 aaKnown RBP21.31■■□□□ 1
TRAIP-206ENST00000477546 BAZ1AQ9NRL2 1556 aaPredicted RBP21.28■■□□□ 1
TRAIP-206ENST00000477546 OSCARQ8IYS5 282 aa21.28■■□□□ 1
TRAIP-206ENST00000477546 SMARCA4P51532 1647 aa21.28■■□□□ 1
TRAIP-206ENST00000477546 MRC2Q9UBG0 1479 aa21.22■□□□□ 0.99
TRAIP-206ENST00000477546 WDR62O43379 1518 aa21.19■□□□□ 0.98
TRAIP-206ENST00000477546 PEG3Q9GZU2 1588 aa21.11■□□□□ 0.97
TRAIP-206ENST00000477546 CADPSQ9ULU8 1353 aa21.08■□□□□ 0.96
TRAIP-206ENST00000477546 RIMBP3CA6NJZ7 1639 aa21.06■□□□□ 0.96
TRAIP-206ENST00000477546 RIMBP3BA6NNM3 1639 aa21.06■□□□□ 0.96
TRAIP-206ENST00000477546 RIMBP3Q9UFD9 1639 aa21.06■□□□□ 0.96
TRAIP-206ENST00000477546 AEBP2Q6ZN18 517 aaPredicted RBP20.98■□□□□ 0.95
TRAIP-206ENST00000477546 CEP164Q9UPV0 1460 aa20.94■□□□□ 0.94
TRAIP-206ENST00000477546 ARHGEF11O15085 1522 aa20.94■□□□□ 0.94
TRAIP-206ENST00000477546 TRHP20396 242 aaPredicted RBP20.88■□□□□ 0.93
TRAIP-206ENST00000477546 FANCD2Q9BXW9 1451 aa20.82■□□□□ 0.92
TRAIP-206ENST00000477546 CYB5RLQ6IPT4 315 aa20.82■□□□□ 0.92
TRAIP-206ENST00000477546 MROH2BQ7Z745 1585 aa20.81■□□□□ 0.92
TRAIP-206ENST00000477546 URB2Q14146 1524 aaKnown RBP20.7■□□□□ 0.9
TRAIP-206ENST00000477546 ARAP1Q96P48 1450 aa20.67■□□□□ 0.9
TRAIP-206ENST00000477546 CFTRP13569 1480 aa20.64■□□□□ 0.89
TRAIP-206ENST00000477546 ZNF608Q9ULD9 1512 aaPredicted RBP20.59■□□□□ 0.89
TRAIP-206ENST00000477546 IFT140Q96RY7 1462 aa20.56■□□□□ 0.88
TRAIP-206ENST00000477546 RSF1Q96T23 1441 aaPredicted RBP20.53■□□□□ 0.88
TRAIP-206ENST00000477546 WIZO95785 1651 aa20.47■□□□□ 0.87
TRAIP-206ENST00000477546 EIF4G3O43432 1585 aaKnown RBP20.42■□□□□ 0.86
TRAIP-206ENST00000477546 CHD1O14646 1710 aa20.39■□□□□ 0.86
TRAIP-206ENST00000477546 FBLN2P98095 1184 aa20.33■□□□□ 0.85
TRAIP-206ENST00000477546 TOPBP1Q92547 1522 aa20.32■□□□□ 0.84
TRAIP-206ENST00000477546 AQRO60306 1485 aaKnown RBP eCLIP20.29■□□□□ 0.846e-9■■■■■ 45.1
TRAIP-206ENST00000477546 PRDM2Q13029 1718 aa20.24■□□□□ 0.83
TRAIP-206ENST00000477546 ABCC8Q09428 1581 aa20.23■□□□□ 0.83
TRAIP-206ENST00000477546 ILDR1Q86SU0 546 aaPredicted RBP20.23■□□□□ 0.83
TRAIP-206ENST00000477546 CLASP1Q7Z460 1538 aa20.22■□□□□ 0.83
TRAIP-206ENST00000477546 TOP2AP11388 1531 aaKnown RBP20.21■□□□□ 0.83
TRAIP-206ENST00000477546 TARBP1Q13395 1621 aaKnown RBP20.19■□□□□ 0.82
TRAIP-206ENST00000477546 DNMBPQ6XZF7 1577 aa20.16■□□□□ 0.82
TRAIP-206ENST00000477546 SYNJ1O43426 1573 aa20.11■□□□□ 0.81
TRAIP-206ENST00000477546 GAPVD1Q14C86 1478 aa20.08■□□□□ 0.81
TRAIP-206ENST00000477546 SNAPC4Q5SXM2 1469 aa20.06■□□□□ 0.8
TRAIP-206ENST00000477546 POLA1P09884 1462 aaPredicted RBP20.05■□□□□ 0.8
TRAIP-206ENST00000477546 CHMP7Q8WUX9 453 aaPredicted RBP20.05■□□□□ 0.8
TRAIP-206ENST00000477546 TDRD9Q8NDG6 1382 aaKnown RBP20.02■□□□□ 0.8
TRAIP-206ENST00000477546 MAGI1Q96QZ7 1491 aaPredicted RBP20■□□□□ 0.79
TRAIP-206ENST00000477546 CCDC88BA6NC98 1476 aa19.98■□□□□ 0.79
TRAIP-206ENST00000477546 RAD54L2Q9Y4B4 1467 aa19.97■□□□□ 0.79
TRAIP-206ENST00000477546 WDR97A6NE52 1622 aa19.95■□□□□ 0.78
TRAIP-206ENST00000477546 SOGA1O94964 1423 aa19.94■□□□□ 0.78
TRAIP-206ENST00000477546 SYNJ2O15056 1496 aa19.94■□□□□ 0.78
TRAIP-206ENST00000477546 GRIN2BQ13224 1484 aa19.89■□□□□ 0.77
TRAIP-206ENST00000477546 KDM4FA0A1W2PPD8 638 aa19.88■□□□□ 0.77
TRAIP-206ENST00000477546 KIF13AQ9H1H9 1805 aa19.8■□□□□ 0.76
TRAIP-206ENST00000477546 ERCC6L2Q5T890 1561 aa19.79■□□□□ 0.76
TRAIP-206ENST00000477546 FGD5Q6ZNL6 1462 aa19.79■□□□□ 0.76
TRAIP-206ENST00000477546 CEP170Q5SW79 1584 aa19.7■□□□□ 0.74
TRAIP-206ENST00000477546 ABCC10Q5T3U5 1492 aa19.67■□□□□ 0.74
TRAIP-206ENST00000477546 FAM69CQ0P6D2 419 aa19.67■□□□□ 0.74
TRAIP-206ENST00000477546 PBRM1Q86U86 1689 aa19.66■□□□□ 0.74
TRAIP-206ENST00000477546 KDM6BO15054 1643 aa19.63■□□□□ 0.73
TRAIP-206ENST00000477546 GRIN2AQ12879 1464 aa19.63■□□□□ 0.73
TRAIP-206ENST00000477546 NUP160Q12769 1436 aa19.63■□□□□ 0.73
TRAIP-206ENST00000477546 CUX1P39880 1505 aa19.61■□□□□ 0.73
TRAIP-206ENST00000477546 SHROOM2Q13796 1616 aa19.6■□□□□ 0.73
TRAIP-206ENST00000477546 MAPKBP1O60336 1514 aa19.56■□□□□ 0.72
TRAIP-206ENST00000477546 DIP2BQ9P265 1576 aa19.56■□□□□ 0.72
TRAIP-206ENST00000477546 ABCA5Q8WWZ7 1642 aa19.55■□□□□ 0.72
TRAIP-206ENST00000477546 ABCA10Q8WWZ4 1543 aa19.53■□□□□ 0.72
TRAIP-206ENST00000477546 HECW2Q9P2P5 1572 aa19.53■□□□□ 0.72
TRAIP-206ENST00000477546 NPM1P06748 294 aaKnown RBP eCLIP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms