RNA–Protein interactions for RNA: ENST00000477468.1

MKL1-209, Transcript of MKL/myocardin-like protein 1, humanhuman

TSL 2

Gene MKL1, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKL1-209ENST00000477468 NISCHQ9Y2I1 1504 aa22.06■■□□□ 1.12
MKL1-209ENST00000477468 CCDC180Q9P1Z9 1646 aa19.65■□□□□ 0.74
MKL1-209ENST00000477468 ABCC9O60706 1549 aa18.6■□□□□ 0.57
MKL1-209ENST00000477468 ZCCHC6Q5VYS8 1495 aaKnown RBP18.52■□□□□ 0.56
MKL1-209ENST00000477468 DCAF1Q9Y4B6 1507 aa18.34■□□□□ 0.53
MKL1-209ENST00000477468 MYO15BQ96JP2 1530 aa18.28■□□□□ 0.52
MKL1-209ENST00000477468 NACADO15069 1562 aa18.25■□□□□ 0.51
MKL1-209ENST00000477468 RB1CC1Q8TDY2 1594 aa18.2■□□□□ 0.5
MKL1-209ENST00000477468 DCAF8L2P0C7V8 631 aa18■□□□□ 0.47
MKL1-209ENST00000477468 UNC13AQ9UPW8 1703 aa17.88■□□□□ 0.45
MKL1-209ENST00000477468 SCRIBQ14160 1630 aa17.84■□□□□ 0.45
MKL1-209ENST00000477468 BICRAQ9NZM4 1560 aa17.58■□□□□ 0.41
MKL1-209ENST00000477468 SHROOM4Q9ULL8 1493 aa17.55■□□□□ 0.4
MKL1-209ENST00000477468 PABPN1Q86U42 306 aaKnown RBP eCLIP17.28■□□□□ 0.36
MKL1-209ENST00000477468 BAZ1AQ9NRL2 1556 aaPredicted RBP17.14■□□□□ 0.33
MKL1-209ENST00000477468 SMARCA4P51532 1647 aa17.12■□□□□ 0.33
MKL1-209ENST00000477468 EIF4G1Q04637 1599 aaKnown RBP17.11■□□□□ 0.33
MKL1-209ENST00000477468 CECR2Q9BXF3 1484 aa17.05■□□□□ 0.32
MKL1-209ENST00000477468 MROH2BQ7Z745 1585 aa16.98■□□□□ 0.31
MKL1-209ENST00000477468 PEG3Q9GZU2 1588 aa16.95■□□□□ 0.3
MKL1-209ENST00000477468 CC2D2AQ9P2K1 1620 aa16.93■□□□□ 0.3
MKL1-209ENST00000477468 SMARCA2P51531 1590 aa16.91■□□□□ 0.3
MKL1-209ENST00000477468 WIZO95785 1651 aa16.88■□□□□ 0.29
MKL1-209ENST00000477468 RSF1Q96T23 1441 aaPredicted RBP16.87■□□□□ 0.29
MKL1-209ENST00000477468 HMGXB3Q12766 1538 aa16.84■□□□□ 0.29
MKL1-209ENST00000477468 ATAD2BQ9ULI0 1458 aa16.81■□□□□ 0.28
MKL1-209ENST00000477468 TOP2AP11388 1531 aaKnown RBP16.76■□□□□ 0.27
MKL1-209ENST00000477468 BAZ1BQ9UIG0 1483 aaKnown RBP16.75■□□□□ 0.27
MKL1-209ENST00000477468 NCAPD3P42695 1498 aa16.73■□□□□ 0.27
MKL1-209ENST00000477468 SUPT5HO00267 1087 aaKnown RBP16.6■□□□□ 0.25
MKL1-209ENST00000477468 DNAJC5BQ9UF47 199 aa16.49■□□□□ 0.23
MKL1-209ENST00000477468 PRDM2Q13029 1718 aa16.46■□□□□ 0.23
MKL1-209ENST00000477468 CCDC88BA6NC98 1476 aa16.42■□□□□ 0.22
MKL1-209ENST00000477468 LAMC3Q9Y6N6 1575 aa16.36■□□□□ 0.21
MKL1-209ENST00000477468 CFTRP13569 1480 aa16.28■□□□□ 0.2
MKL1-209ENST00000477468 CADPSQ9ULU8 1353 aa16.23■□□□□ 0.19
MKL1-209ENST00000477468 NESP48681 1621 aa16.2■□□□□ 0.18
MKL1-209ENST00000477468 KIF21AQ7Z4S6 1674 aa16.2■□□□□ 0.18
MKL1-209ENST00000477468 PDS5BQ9NTI5 1447 aa16.11■□□□□ 0.17
MKL1-209ENST00000477468 FANCD2Q9BXW9 1451 aa16.11■□□□□ 0.17
MKL1-209ENST00000477468 CEP164Q9UPV0 1460 aa16.1■□□□□ 0.17
MKL1-209ENST00000477468 THOC2Q8NI27 1593 aaKnown RBP16.05■□□□□ 0.16
MKL1-209ENST00000477468 ERCC6Q03468 1493 aa16.05■□□□□ 0.16
MKL1-209ENST00000477468 BIVM-ERCC5R4GMW8 1640 aa16.02■□□□□ 0.16
MKL1-209ENST00000477468 ABCC8Q09428 1581 aa16.02■□□□□ 0.16
MKL1-209ENST00000477468 DNMBPQ6XZF7 1577 aa16■□□□□ 0.15
MKL1-209ENST00000477468 MRC2Q9UBG0 1479 aa15.99■□□□□ 0.15
MKL1-209ENST00000477468 WDR62O43379 1518 aa15.98■□□□□ 0.15
MKL1-209ENST00000477468 TOP2BQ02880 1626 aa15.97■□□□□ 0.15
MKL1-209ENST00000477468 SYNJ1O43426 1573 aa15.96■□□□□ 0.15
MKL1-209ENST00000477468 WRNQ14191 1432 aaPredicted RBP eCLIP15.95■□□□□ 0.14
MKL1-209ENST00000477468 CUX1P39880 1505 aa15.94■□□□□ 0.14
MKL1-209ENST00000477468 URB2Q14146 1524 aaKnown RBP15.93■□□□□ 0.14
MKL1-209ENST00000477468 TOPBP1Q92547 1522 aa15.92■□□□□ 0.14
MKL1-209ENST00000477468 WDR97A6NE52 1622 aa15.85■□□□□ 0.13
MKL1-209ENST00000477468 FGD5Q6ZNL6 1462 aa15.83■□□□□ 0.12
MKL1-209ENST00000477468 POLA1P09884 1462 aaPredicted RBP15.8■□□□□ 0.12
MKL1-209ENST00000477468 CUX2O14529 1486 aa15.78■□□□□ 0.12
MKL1-209ENST00000477468 TARBP1Q13395 1621 aaKnown RBP15.76■□□□□ 0.11
MKL1-209ENST00000477468 IFT140Q96RY7 1462 aa15.72■□□□□ 0.11
MKL1-209ENST00000477468 CHIC1Q5VXU3 224 aa15.71■□□□□ 0.11
MKL1-209ENST00000477468 ABCA10Q8WWZ4 1543 aa15.7■□□□□ 0.1
MKL1-209ENST00000477468 ABCA5Q8WWZ7 1642 aa15.7■□□□□ 0.1
MKL1-209ENST00000477468 TRIM41Q8WV44 630 aa15.69■□□□□ 0.1
MKL1-209ENST00000477468 EIF4G3O43432 1585 aaKnown RBP15.69■□□□□ 0.1
MKL1-209ENST00000477468 PBRM1Q86U86 1689 aa15.68■□□□□ 0.1
MKL1-209ENST00000477468 RAD54L2Q9Y4B4 1467 aa15.65■□□□□ 0.1
MKL1-209ENST00000477468 SOGA1O94964 1423 aa15.65■□□□□ 0.1
MKL1-209ENST00000477468 EEA1Q15075 1411 aa15.6■□□□□ 0.09
MKL1-209ENST00000477468 KIF27Q86VH2 1401 aa15.59■□□□□ 0.09
MKL1-209ENST00000477468 CUL7Q14999 1698 aa15.58■□□□□ 0.08
MKL1-209ENST00000477468 ZNF608Q9ULD9 1512 aaPredicted RBP15.56■□□□□ 0.08
MKL1-209ENST00000477468 ERICH3Q5RHP9 1530 aa15.55■□□□□ 0.08
MKL1-209ENST00000477468 GAPVD1Q14C86 1478 aa15.54■□□□□ 0.08
MKL1-209ENST00000477468 ADAMTS12P58397 1594 aa15.53■□□□□ 0.08
MKL1-209ENST00000477468 GRIN2BQ13224 1484 aa15.51■□□□□ 0.07
MKL1-209ENST00000477468 KIF21BO75037 1637 aa15.48■□□□□ 0.07
MKL1-209ENST00000477468 TDRD9Q8NDG6 1382 aaKnown RBP15.48■□□□□ 0.07
MKL1-209ENST00000477468 RUSC2Q8N2Y8 1516 aa15.48■□□□□ 0.07
MKL1-209ENST00000477468 MAGI1Q96QZ7 1491 aaPredicted RBP15.47■□□□□ 0.07
MKL1-209ENST00000477468 AQRO60306 1485 aaKnown RBP eCLIP15.46■□□□□ 0.07
MKL1-209ENST00000477468 SNAPC4Q5SXM2 1469 aa15.45■□□□□ 0.06
MKL1-209ENST00000477468 CHD1O14646 1710 aa15.43■□□□□ 0.06
MKL1-209ENST00000477468 CTTNBP2Q8WZ74 1663 aa15.39■□□□□ 0.05
MKL1-209ENST00000477468 FHAD1B1AJZ9 1412 aa15.38■□□□□ 0.05
MKL1-209ENST00000477468 SYNJ2O15056 1496 aa15.38■□□□□ 0.05
MKL1-209ENST00000477468 PRXQ9BXM0 1461 aa15.38■□□□□ 0.05
MKL1-209ENST00000477468 GOLGA3Q08378 1498 aa15.35■□□□□ 0.05
MKL1-209ENST00000477468 IGF1RP08069 1367 aa15.35■□□□□ 0.05
MKL1-209ENST00000477468 RAPGEF2Q9Y4G8 1499 aa15.34■□□□□ 0.05
MKL1-209ENST00000477468 GRIN2AQ12879 1464 aa15.33■□□□□ 0.05
MKL1-209ENST00000477468 FAM9AQ8IZU1 332 aaPredicted RBP15.31■□□□□ 0.04
MKL1-209ENST00000477468 CSRNP3Q8WYN3 585 aa15.31■□□□□ 0.04
MKL1-209ENST00000477468 CARMIL1Q5VZK9 1371 aa15.31■□□□□ 0.04
MKL1-209ENST00000477468 CEP170Q5SW79 1584 aa15.27■□□□□ 0.03
MKL1-209ENST00000477468 IQGAP2Q13576 1575 aa15.24■□□□□ 0.03
MKL1-209ENST00000477468 NUP160Q12769 1436 aa15.23■□□□□ 0.03
MKL1-209ENST00000477468 CLASP1Q7Z460 1538 aa15.21■□□□□ 0.03
MKL1-209ENST00000477468 CHMP7Q8WUX9 453 aaPredicted RBP15.17■□□□□ 0.02
MKL1-209ENST00000477468 SHROOM2Q13796 1616 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms