RNA–Protein interactions for RNA: ENST00000477431.1

TRAF3IP3-212, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 3 BASIC

Gene TRAF3IP3, Length 791 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-212ENST00000477431 NISCHQ9Y2I1 1504 aa23.25■■□□□ 1.31
TRAF3IP3-212ENST00000477431 CCDC180Q9P1Z9 1646 aa20.83■□□□□ 0.93
TRAF3IP3-212ENST00000477431 ABCC9O60706 1549 aa20.47■□□□□ 0.87
TRAF3IP3-212ENST00000477431 AEBP2Q6ZN18 517 aaPredicted RBP20.21■□□□□ 0.83
TRAF3IP3-212ENST00000477431 DCAF8L2P0C7V8 631 aa19.67■□□□□ 0.74
TRAF3IP3-212ENST00000477431 RB1CC1Q8TDY2 1594 aa19.63■□□□□ 0.73
TRAF3IP3-212ENST00000477431 NACADO15069 1562 aa19.51■□□□□ 0.71
TRAF3IP3-212ENST00000477431 UNC13AQ9UPW8 1703 aa19.39■□□□□ 0.69
TRAF3IP3-212ENST00000477431 ZCCHC6Q5VYS8 1495 aaKnown RBP19.34■□□□□ 0.69
TRAF3IP3-212ENST00000477431 MYO15BQ96JP2 1530 aa19.2■□□□□ 0.66
TRAF3IP3-212ENST00000477431 CHIC1Q5VXU3 224 aa19.14■□□□□ 0.65
TRAF3IP3-212ENST00000477431 DCAF1Q9Y4B6 1507 aa19.14■□□□□ 0.65
TRAF3IP3-212ENST00000477431 SCRIBQ14160 1630 aa19.09■□□□□ 0.65
TRAF3IP3-212ENST00000477431 PABPN1Q86U42 306 aaKnown RBP eCLIP19.07■□□□□ 0.64
TRAF3IP3-212ENST00000477431 BICRAQ9NZM4 1560 aa18.98■□□□□ 0.63
TRAF3IP3-212ENST00000477431 DNAJC5BQ9UF47 199 aa18.7■□□□□ 0.58
TRAF3IP3-212ENST00000477431 SHROOM4Q9ULL8 1493 aa18.65■□□□□ 0.58
TRAF3IP3-212ENST00000477431 CC2D2AQ9P2K1 1620 aa18.52■□□□□ 0.55
TRAF3IP3-212ENST00000477431 EIF4G1Q04637 1599 aaKnown RBP18.51■□□□□ 0.55
TRAF3IP3-212ENST00000477431 CECR2Q9BXF3 1484 aa18.34■□□□□ 0.53
TRAF3IP3-212ENST00000477431 SMARCA4P51532 1647 aa18.16■□□□□ 0.5
TRAF3IP3-212ENST00000477431 BAZ1AQ9NRL2 1556 aaPredicted RBP18.08■□□□□ 0.48
TRAF3IP3-212ENST00000477431 SMARCA2P51531 1590 aa18■□□□□ 0.47
TRAF3IP3-212ENST00000477431 ATAD2BQ9ULI0 1458 aa17.96■□□□□ 0.47
TRAF3IP3-212ENST00000477431 MROH2BQ7Z745 1585 aa17.96■□□□□ 0.46
TRAF3IP3-212ENST00000477431 BAZ1BQ9UIG0 1483 aaKnown RBP17.9■□□□□ 0.46
TRAF3IP3-212ENST00000477431 HMGXB3Q12766 1538 aa17.9■□□□□ 0.46
TRAF3IP3-212ENST00000477431 WIZO95785 1651 aa17.9■□□□□ 0.46
TRAF3IP3-212ENST00000477431 NCAPD3P42695 1498 aa17.89■□□□□ 0.45
TRAF3IP3-212ENST00000477431 PEG3Q9GZU2 1588 aa17.84■□□□□ 0.45
TRAF3IP3-212ENST00000477431 ERCC6Q03468 1493 aa17.68■□□□□ 0.42
TRAF3IP3-212ENST00000477431 NESP48681 1621 aa17.66■□□□□ 0.42
TRAF3IP3-212ENST00000477431 RSF1Q96T23 1441 aaPredicted RBP17.64■□□□□ 0.42
TRAF3IP3-212ENST00000477431 KIF21AQ7Z4S6 1674 aa17.61■□□□□ 0.41
TRAF3IP3-212ENST00000477431 LAMC3Q9Y6N6 1575 aa17.59■□□□□ 0.41
TRAF3IP3-212ENST00000477431 TOP2AP11388 1531 aaKnown RBP17.58■□□□□ 0.41
TRAF3IP3-212ENST00000477431 SENP3Q9H4L4 574 aaPredicted RBP17.57■□□□□ 0.4
TRAF3IP3-212ENST00000477431 PRDM2Q13029 1718 aa17.5■□□□□ 0.39
TRAF3IP3-212ENST00000477431 THOC2Q8NI27 1593 aaKnown RBP17.43■□□□□ 0.38
TRAF3IP3-212ENST00000477431 PDS5BQ9NTI5 1447 aa17.42■□□□□ 0.38
TRAF3IP3-212ENST00000477431 CADPSQ9ULU8 1353 aa17.41■□□□□ 0.38
TRAF3IP3-212ENST00000477431 CUX2O14529 1486 aa17.38■□□□□ 0.37
TRAF3IP3-212ENST00000477431 CCDC88BA6NC98 1476 aa17.35■□□□□ 0.37
TRAF3IP3-212ENST00000477431 SUPT5HO00267 1087 aaKnown RBP17.33■□□□□ 0.36
TRAF3IP3-212ENST00000477431 CEP164Q9UPV0 1460 aa17.32■□□□□ 0.36
TRAF3IP3-212ENST00000477431 FANCD2Q9BXW9 1451 aa17.3■□□□□ 0.36
TRAF3IP3-212ENST00000477431 CFTRP13569 1480 aa17.28■□□□□ 0.36
TRAF3IP3-212ENST00000477431 MRC2Q9UBG0 1479 aa17.28■□□□□ 0.36
TRAF3IP3-212ENST00000477431 WDR62O43379 1518 aa17.21■□□□□ 0.34
TRAF3IP3-212ENST00000477431 PHF23Q9BUL5 403 aaPredicted RBP17.14■□□□□ 0.33
TRAF3IP3-212ENST00000477431 URB2Q14146 1524 aaKnown RBP17.12■□□□□ 0.33
TRAF3IP3-212ENST00000477431 DNMBPQ6XZF7 1577 aa17.02■□□□□ 0.32
TRAF3IP3-212ENST00000477431 TOPBP1Q92547 1522 aa17.01■□□□□ 0.31
TRAF3IP3-212ENST00000477431 ABCC8Q09428 1581 aa16.97■□□□□ 0.31
TRAF3IP3-212ENST00000477431 IFT140Q96RY7 1462 aa16.9■□□□□ 0.3
TRAF3IP3-212ENST00000477431 DNAJC5Q9H3Z4 198 aa16.89■□□□□ 0.29
TRAF3IP3-212ENST00000477431 EIF4G3O43432 1585 aaKnown RBP16.89■□□□□ 0.29
TRAF3IP3-212ENST00000477431 ZNF608Q9ULD9 1512 aaPredicted RBP16.86■□□□□ 0.29
TRAF3IP3-212ENST00000477431 CUX1P39880 1505 aa16.86■□□□□ 0.29
TRAF3IP3-212ENST00000477431 TARBP1Q13395 1621 aaKnown RBP16.85■□□□□ 0.29
TRAF3IP3-212ENST00000477431 POLA1P09884 1462 aaPredicted RBP16.84■□□□□ 0.29
TRAF3IP3-212ENST00000477431 FGD5Q6ZNL6 1462 aa16.84■□□□□ 0.29
TRAF3IP3-212ENST00000477431 CHD1O14646 1710 aa16.82■□□□□ 0.28
TRAF3IP3-212ENST00000477431 RAD54L2Q9Y4B4 1467 aa16.82■□□□□ 0.28
TRAF3IP3-212ENST00000477431 PBRM1Q86U86 1689 aa16.79■□□□□ 0.28
TRAF3IP3-212ENST00000477431 WDR97A6NE52 1622 aa16.78■□□□□ 0.28
TRAF3IP3-212ENST00000477431 SOGA1O94964 1423 aa16.78■□□□□ 0.28
TRAF3IP3-212ENST00000477431 BIVM-ERCC5R4GMW8 1640 aa16.77■□□□□ 0.27
TRAF3IP3-212ENST00000477431 AQRO60306 1485 aaKnown RBP eCLIP16.76■□□□□ 0.27
TRAF3IP3-212ENST00000477431 SYNJ1O43426 1573 aa16.74■□□□□ 0.27
TRAF3IP3-212ENST00000477431 TOP2BQ02880 1626 aa16.72■□□□□ 0.27
TRAF3IP3-212ENST00000477431 TDRD9Q8NDG6 1382 aaKnown RBP16.71■□□□□ 0.27
TRAF3IP3-212ENST00000477431 WRNQ14191 1432 aaPredicted RBP eCLIP16.7■□□□□ 0.26
TRAF3IP3-212ENST00000477431 FBLN2P98095 1184 aa16.69■□□□□ 0.26
TRAF3IP3-212ENST00000477431 OSCARQ8IYS5 282 aa16.66■□□□□ 0.26
TRAF3IP3-212ENST00000477431 SNAPC4Q5SXM2 1469 aa16.63■□□□□ 0.25
TRAF3IP3-212ENST00000477431 ABCA5Q8WWZ7 1642 aa16.63■□□□□ 0.25
TRAF3IP3-212ENST00000477431 GAPVD1Q14C86 1478 aa16.61■□□□□ 0.25
TRAF3IP3-212ENST00000477431 ABCA10Q8WWZ4 1543 aa16.6■□□□□ 0.25
TRAF3IP3-212ENST00000477431 GRIN2BQ13224 1484 aa16.59■□□□□ 0.25
TRAF3IP3-212ENST00000477431 RIMBP3CA6NJZ7 1639 aa16.55■□□□□ 0.24
TRAF3IP3-212ENST00000477431 RIMBP3BA6NNM3 1639 aa16.55■□□□□ 0.24
TRAF3IP3-212ENST00000477431 RIMBP3Q9UFD9 1639 aa16.55■□□□□ 0.24
TRAF3IP3-212ENST00000477431 MAGI1Q96QZ7 1491 aaPredicted RBP16.54■□□□□ 0.24
TRAF3IP3-212ENST00000477431 CHMP7Q8WUX9 453 aaPredicted RBP16.54■□□□□ 0.24
TRAF3IP3-212ENST00000477431 TRIM41Q8WV44 630 aa16.54■□□□□ 0.24
TRAF3IP3-212ENST00000477431 ADAMTS12P58397 1594 aa16.49■□□□□ 0.23
TRAF3IP3-212ENST00000477431 SYNJ2O15056 1496 aa16.48■□□□□ 0.23
TRAF3IP3-212ENST00000477431 ARHGEF11O15085 1522 aa16.44■□□□□ 0.22
TRAF3IP3-212ENST00000477431 ERICH3Q5RHP9 1530 aa16.42■□□□□ 0.22
TRAF3IP3-212ENST00000477431 CLASP1Q7Z460 1538 aa16.4■□□□□ 0.22
TRAF3IP3-212ENST00000477431 POTEDQ86YR6 584 aa16.39■□□□□ 0.21
TRAF3IP3-212ENST00000477431 GRIN2AQ12879 1464 aa16.39■□□□□ 0.21
TRAF3IP3-212ENST00000477431 CUL7Q14999 1698 aa16.37■□□□□ 0.21
TRAF3IP3-212ENST00000477431 CEP170Q5SW79 1584 aa16.37■□□□□ 0.21
TRAF3IP3-212ENST00000477431 FHAD1B1AJZ9 1412 aa16.36■□□□□ 0.21
TRAF3IP3-212ENST00000477431 KIF27Q86VH2 1401 aa16.36■□□□□ 0.21
TRAF3IP3-212ENST00000477431 FOXD1Q16676 465 aa16.32■□□□□ 0.2
TRAF3IP3-212ENST00000477431 CYB5RLQ6IPT4 315 aa16.31■□□□□ 0.2
TRAF3IP3-212ENST00000477431 ARAP1Q96P48 1450 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms