RNA–Protein interactions for RNA: ENST00000477240.1

ARPC1A-205, Transcript of actin related protein 2/3 complex subunit 1A, humanhuman

TSL 2

Gene ARPC1A, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1A-205ENST00000477240 AEBP2Q6ZN18 517 aaPredicted RBP22.18■■□□□ 1.14
ARPC1A-205ENST00000477240 CHIC1Q5VXU3 224 aa20.96■□□□□ 0.95
ARPC1A-205ENST00000477240 NISCHQ9Y2I1 1504 aa20.73■□□□□ 0.91
ARPC1A-205ENST00000477240 SENP3Q9H4L4 574 aaPredicted RBP18.95■□□□□ 0.62
ARPC1A-205ENST00000477240 PHF23Q9BUL5 403 aaPredicted RBP18.68■□□□□ 0.58
ARPC1A-205ENST00000477240 CCDC180Q9P1Z9 1646 aa18.51■□□□□ 0.55
ARPC1A-205ENST00000477240 ABCC9O60706 1549 aa18.29■□□□□ 0.52
ARPC1A-205ENST00000477240 FOXD1Q16676 465 aa17.66■□□□□ 0.42
ARPC1A-205ENST00000477240 RB1CC1Q8TDY2 1594 aa17.53■□□□□ 0.4
ARPC1A-205ENST00000477240 NACADO15069 1562 aa17.46■□□□□ 0.39
ARPC1A-205ENST00000477240 DCAF8L2P0C7V8 631 aa17.42■□□□□ 0.38
ARPC1A-205ENST00000477240 MYO15BQ96JP2 1530 aa17.31■□□□□ 0.36
ARPC1A-205ENST00000477240 ZCCHC6Q5VYS8 1495 aaKnown RBP17.24■□□□□ 0.35
ARPC1A-205ENST00000477240 DCAF1Q9Y4B6 1507 aa17.16■□□□□ 0.34
ARPC1A-205ENST00000477240 UNC13AQ9UPW8 1703 aa17.1■□□□□ 0.33
ARPC1A-205ENST00000477240 PABPN1Q86U42 306 aaKnown RBP eCLIP17.07■□□□□ 0.32
ARPC1A-205ENST00000477240 BICRAQ9NZM4 1560 aa16.99■□□□□ 0.31
ARPC1A-205ENST00000477240 DNAJC5BQ9UF47 199 aa16.97■□□□□ 0.31
ARPC1A-205ENST00000477240 SCRIBQ14160 1630 aa16.86■□□□□ 0.29
ARPC1A-205ENST00000477240 SHROOM4Q9ULL8 1493 aa16.82■□□□□ 0.28
ARPC1A-205ENST00000477240 PLPPR3Q6T4P5 718 aa16.73■□□□□ 0.27
ARPC1A-205ENST00000477240 EIF4G1Q04637 1599 aaKnown RBP16.56■□□□□ 0.24
ARPC1A-205ENST00000477240 MSH5O43196 834 aa16.56■□□□□ 0.24
ARPC1A-205ENST00000477240 PIAS4Q8N2W9 510 aaPredicted RBP16.54■□□□□ 0.24
ARPC1A-205ENST00000477240 CC2D2AQ9P2K1 1620 aa16.54■□□□□ 0.24
ARPC1A-205ENST00000477240 CECR2Q9BXF3 1484 aa16.47■□□□□ 0.23
ARPC1A-205ENST00000477240 PPP6R1Q9UPN7 881 aa16.45■□□□□ 0.22
ARPC1A-205ENST00000477240 ADRA2BP18089 450 aa16.42■□□□□ 0.22
ARPC1A-205ENST00000477240 POTEDQ86YR6 584 aa16.33■□□□□ 0.2
ARPC1A-205ENST00000477240 SMARCA4P51532 1647 aa16.12■□□□□ 0.17
ARPC1A-205ENST00000477240 NCAPD3P42695 1498 aa16.12■□□□□ 0.17
ARPC1A-205ENST00000477240 ATAD2BQ9ULI0 1458 aa16.1■□□□□ 0.17
ARPC1A-205ENST00000477240 BAZ1AQ9NRL2 1556 aaPredicted RBP16.09■□□□□ 0.17
ARPC1A-205ENST00000477240 SMARCA2P51531 1590 aa16.07■□□□□ 0.16
ARPC1A-205ENST00000477240 HMGXB3Q12766 1538 aa16.02■□□□□ 0.15
ARPC1A-205ENST00000477240 PEG3Q9GZU2 1588 aa15.98■□□□□ 0.15
ARPC1A-205ENST00000477240 MROH2BQ7Z745 1585 aa15.97■□□□□ 0.15
ARPC1A-205ENST00000477240 BAZ1BQ9UIG0 1483 aaKnown RBP15.95■□□□□ 0.14
ARPC1A-205ENST00000477240 ERCC6Q03468 1493 aa15.8■□□□□ 0.12
ARPC1A-205ENST00000477240 WIZO95785 1651 aa15.79■□□□□ 0.12
ARPC1A-205ENST00000477240 NESP48681 1621 aa15.77■□□□□ 0.12
ARPC1A-205ENST00000477240 RSF1Q96T23 1441 aaPredicted RBP15.73■□□□□ 0.11
ARPC1A-205ENST00000477240 LAMC3Q9Y6N6 1575 aa15.72■□□□□ 0.11
ARPC1A-205ENST00000477240 CUX2O14529 1486 aa15.71■□□□□ 0.1
ARPC1A-205ENST00000477240 CADPSQ9ULU8 1353 aa15.64■□□□□ 0.09
ARPC1A-205ENST00000477240 PDS5BQ9NTI5 1447 aa15.63■□□□□ 0.09
ARPC1A-205ENST00000477240 TOP2AP11388 1531 aaKnown RBP15.62■□□□□ 0.09
ARPC1A-205ENST00000477240 KIF21AQ7Z4S6 1674 aa15.57■□□□□ 0.08
ARPC1A-205ENST00000477240 THOC2Q8NI27 1593 aaKnown RBP15.57■□□□□ 0.08
ARPC1A-205ENST00000477240 CFTRP13569 1480 aa15.51■□□□□ 0.07
ARPC1A-205ENST00000477240 MRC2Q9UBG0 1479 aa15.47■□□□□ 0.07
ARPC1A-205ENST00000477240 DNAJC5Q9H3Z4 198 aa15.46■□□□□ 0.07
ARPC1A-205ENST00000477240 FANCD2Q9BXW9 1451 aa15.46■□□□□ 0.06
ARPC1A-205ENST00000477240 CEP164Q9UPV0 1460 aa15.46■□□□□ 0.06
ARPC1A-205ENST00000477240 CCDC88BA6NC98 1476 aa15.43■□□□□ 0.06
ARPC1A-205ENST00000477240 WDR62O43379 1518 aa15.43■□□□□ 0.06
ARPC1A-205ENST00000477240 PRDM2Q13029 1718 aa15.36■□□□□ 0.05
ARPC1A-205ENST00000477240 URB2Q14146 1524 aaKnown RBP15.31■□□□□ 0.04
ARPC1A-205ENST00000477240 SUPT5HO00267 1087 aaKnown RBP15.2■□□□□ 0.02
ARPC1A-205ENST00000477240 ABCC8Q09428 1581 aa15.19■□□□□ 0.02
ARPC1A-205ENST00000477240 TOPBP1Q92547 1522 aa15.18■□□□□ 0.02
ARPC1A-205ENST00000477240 DNMBPQ6XZF7 1577 aa15.15■□□□□ 0.02
ARPC1A-205ENST00000477240 IFT140Q96RY7 1462 aa15.14■□□□□ 0.01
ARPC1A-205ENST00000477240 MAPK8IP2Q13387 824 aaPredicted RBP15.1■□□□□ 0.01
ARPC1A-205ENST00000477240 ZNF608Q9ULD9 1512 aaPredicted RBP15.08■□□□□ 0.01
ARPC1A-205ENST00000477240 POLA1P09884 1462 aaPredicted RBP15.04■□□□□ -0
ARPC1A-205ENST00000477240 OSCARQ8IYS5 282 aa15.03■□□□□ -0
ARPC1A-205ENST00000477240 TARBP1Q13395 1621 aaKnown RBP15.03■□□□□ -0
ARPC1A-205ENST00000477240 EIF4G3O43432 1585 aaKnown RBP15.01□□□□□ -0.01
ARPC1A-205ENST00000477240 SCAF1Q9H7N4 1312 aaKnown RBP15□□□□□ -0.01
ARPC1A-205ENST00000477240 CUX1P39880 1505 aa14.99□□□□□ -0.01
ARPC1A-205ENST00000477240 DMRT2Q9Y5R5 561 aa14.99□□□□□ -0.01
ARPC1A-205ENST00000477240 SOGA1O94964 1423 aa14.99□□□□□ -0.01
ARPC1A-205ENST00000477240 AQRO60306 1485 aaKnown RBP eCLIP14.98□□□□□ -0.019e-6■□□□□ 10.2
ARPC1A-205ENST00000477240 FGD5Q6ZNL6 1462 aa14.98□□□□□ -0.01
ARPC1A-205ENST00000477240 RAD54L2Q9Y4B4 1467 aa14.98□□□□□ -0.01
ARPC1A-205ENST00000477240 TDRD9Q8NDG6 1382 aaKnown RBP14.92□□□□□ -0.02
ARPC1A-205ENST00000477240 WDR97A6NE52 1622 aa14.91□□□□□ -0.02
ARPC1A-205ENST00000477240 FBLN2P98095 1184 aa14.85□□□□□ -0.03
ARPC1A-205ENST00000477240 TRIM41Q8WV44 630 aa14.85□□□□□ -0.03
ARPC1A-205ENST00000477240 CHD1O14646 1710 aa14.85□□□□□ -0.03
ARPC1A-205ENST00000477240 WRNQ14191 1432 aaPredicted RBP eCLIP14.84□□□□□ -0.03
ARPC1A-205ENST00000477240 GRIN2BQ13224 1484 aa14.83□□□□□ -0.03
ARPC1A-205ENST00000477240 ABCA10Q8WWZ4 1543 aa14.83□□□□□ -0.04
ARPC1A-205ENST00000477240 SNAPC4Q5SXM2 1469 aa14.82□□□□□ -0.04
ARPC1A-205ENST00000477240 TOP2BQ02880 1626 aa14.82□□□□□ -0.04
ARPC1A-205ENST00000477240 MAGI1Q96QZ7 1491 aaPredicted RBP14.82□□□□□ -0.04
ARPC1A-205ENST00000477240 BIVM-ERCC5R4GMW8 1640 aa14.81□□□□□ -0.04
ARPC1A-205ENST00000477240 GAPVD1Q14C86 1478 aa14.81□□□□□ -0.04
ARPC1A-205ENST00000477240 SYNJ1O43426 1573 aa14.8□□□□□ -0.04
ARPC1A-205ENST00000477240 CHMP7Q8WUX9 453 aaPredicted RBP14.79□□□□□ -0.04
ARPC1A-205ENST00000477240 RIMBP3CA6NJZ7 1639 aa14.78□□□□□ -0.04
ARPC1A-205ENST00000477240 RIMBP3BA6NNM3 1639 aa14.78□□□□□ -0.04
ARPC1A-205ENST00000477240 RIMBP3Q9UFD9 1639 aa14.78□□□□□ -0.04
ARPC1A-205ENST00000477240 ABCA5Q8WWZ7 1642 aa14.77□□□□□ -0.04
ARPC1A-205ENST00000477240 ARHGEF11O15085 1522 aa14.77□□□□□ -0.04
ARPC1A-205ENST00000477240 PBRM1Q86U86 1689 aa14.77□□□□□ -0.05
ARPC1A-205ENST00000477240 SYNJ2O15056 1496 aa14.76□□□□□ -0.05
ARPC1A-205ENST00000477240 CLASP1Q7Z460 1538 aa14.7□□□□□ -0.06
ARPC1A-205ENST00000477240 ERICH3Q5RHP9 1530 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms