RNA–Protein interactions for RNA: ENST00000477151.1

RPS27-203, Transcript of ribosomal protein S27, humanhuman

TSL 2

Gene RPS27, Length 467 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27-203ENST00000477151 NISCHQ9Y2I1 1504 aa30.24■■■□□ 2.43
RPS27-203ENST00000477151 ABCC9O60706 1549 aa27.95■■■□□ 2.06
RPS27-203ENST00000477151 CCDC180Q9P1Z9 1646 aa27.46■■□□□ 1.99
RPS27-203ENST00000477151 DNAJC5BQ9UF47 199 aa26.49■■□□□ 1.83
RPS27-203ENST00000477151 RB1CC1Q8TDY2 1594 aa26.41■■□□□ 1.82
RPS27-203ENST00000477151 NACADO15069 1562 aa26.06■■□□□ 1.76
RPS27-203ENST00000477151 PABPN1Q86U42 306 aaKnown RBP eCLIP25.88■■□□□ 1.73
RPS27-203ENST00000477151 DCAF8L2P0C7V8 631 aa25.83■■□□□ 1.73
RPS27-203ENST00000477151 UNC13AQ9UPW8 1703 aa25.71■■□□□ 1.71
RPS27-203ENST00000477151 BICRAQ9NZM4 1560 aa25.52■■□□□ 1.68
RPS27-203ENST00000477151 MYO15BQ96JP2 1530 aa25.47■■□□□ 1.67
RPS27-203ENST00000477151 SHROOM4Q9ULL8 1493 aa25.28■■□□□ 1.64
RPS27-203ENST00000477151 CECR2Q9BXF3 1484 aa25.24■■□□□ 1.63
RPS27-203ENST00000477151 CC2D2AQ9P2K1 1620 aa25.21■■□□□ 1.63
RPS27-203ENST00000477151 EIF4G1Q04637 1599 aaKnown RBP25.03■■□□□ 1.6
RPS27-203ENST00000477151 SCRIBQ14160 1630 aa25■■□□□ 1.59
RPS27-203ENST00000477151 ZCCHC6Q5VYS8 1495 aaKnown RBP24.97■■□□□ 1.59
RPS27-203ENST00000477151 DCAF1Q9Y4B6 1507 aa24.95■■□□□ 1.58
RPS27-203ENST00000477151 DNAJC5Q9H3Z4 198 aa24.82■■□□□ 1.56
RPS27-203ENST00000477151 CUX2O14529 1486 aa24.35■■□□□ 1.49
RPS27-203ENST00000477151 ERCC6Q03468 1493 aa24.28■■□□□ 1.48
RPS27-203ENST00000477151 NCAPD3P42695 1498 aa24■■□□□ 1.43
RPS27-203ENST00000477151 ATAD2BQ9ULI0 1458 aa23.87■■□□□ 1.41
RPS27-203ENST00000477151 SMARCA2P51531 1590 aa23.86■■□□□ 1.41
RPS27-203ENST00000477151 HMGXB3Q12766 1538 aa23.84■■□□□ 1.41
RPS27-203ENST00000477151 NESP48681 1621 aa23.8■■□□□ 1.4
RPS27-203ENST00000477151 SMARCA4P51532 1647 aa23.75■■□□□ 1.39
RPS27-203ENST00000477151 THOC2Q8NI27 1593 aaKnown RBP23.72■■□□□ 1.39
RPS27-203ENST00000477151 BAZ1BQ9UIG0 1483 aaKnown RBP23.7■■□□□ 1.38
RPS27-203ENST00000477151 TRIM41Q8WV44 630 aa23.64■■□□□ 1.37
RPS27-203ENST00000477151 LAMC3Q9Y6N6 1575 aa23.63■■□□□ 1.37
RPS27-203ENST00000477151 BAZ1AQ9NRL2 1556 aaPredicted RBP23.58■■□□□ 1.37
RPS27-203ENST00000477151 KIF21AQ7Z4S6 1674 aa23.54■■□□□ 1.36
RPS27-203ENST00000477151 PDS5BQ9NTI5 1447 aa23.52■■□□□ 1.36
RPS27-203ENST00000477151 PEG3Q9GZU2 1588 aa23.48■■□□□ 1.35
RPS27-203ENST00000477151 MRC2Q9UBG0 1479 aa23.35■■□□□ 1.33
RPS27-203ENST00000477151 WDR62O43379 1518 aa23.28■■□□□ 1.32
RPS27-203ENST00000477151 MROH2BQ7Z745 1585 aa23.27■■□□□ 1.32
RPS27-203ENST00000477151 CADPSQ9ULU8 1353 aa23.27■■□□□ 1.31
RPS27-203ENST00000477151 CEP164Q9UPV0 1460 aa23.17■■□□□ 1.3
RPS27-203ENST00000477151 OSCARQ8IYS5 282 aa23.1■■□□□ 1.29
RPS27-203ENST00000477151 FANCD2Q9BXW9 1451 aa23.05■■□□□ 1.28
RPS27-203ENST00000477151 WIZO95785 1651 aa23■■□□□ 1.27
RPS27-203ENST00000477151 CFTRP13569 1480 aa22.88■■□□□ 1.25
RPS27-203ENST00000477151 RIMBP3CA6NJZ7 1639 aa22.88■■□□□ 1.25
RPS27-203ENST00000477151 RIMBP3BA6NNM3 1639 aa22.88■■□□□ 1.25
RPS27-203ENST00000477151 RIMBP3Q9UFD9 1639 aa22.88■■□□□ 1.25
RPS27-203ENST00000477151 URB2Q14146 1524 aaKnown RBP22.84■■□□□ 1.25
RPS27-203ENST00000477151 ARHGEF11O15085 1522 aa22.76■■□□□ 1.23
RPS27-203ENST00000477151 TOP2AP11388 1531 aaKnown RBP22.72■■□□□ 1.23
RPS27-203ENST00000477151 IFT140Q96RY7 1462 aa22.7■■□□□ 1.22
RPS27-203ENST00000477151 PRDM2Q13029 1718 aa22.7■■□□□ 1.22
RPS27-203ENST00000477151 ZNF608Q9ULD9 1512 aaPredicted RBP22.65■■□□□ 1.22
RPS27-203ENST00000477151 TRHP20396 242 aaPredicted RBP22.61■■□□□ 1.21
RPS27-203ENST00000477151 CYB5RLQ6IPT4 315 aa22.59■■□□□ 1.21
RPS27-203ENST00000477151 EIF4G3O43432 1585 aaKnown RBP22.59■■□□□ 1.21
RPS27-203ENST00000477151 RSF1Q96T23 1441 aaPredicted RBP22.58■■□□□ 1.21
RPS27-203ENST00000477151 TOPBP1Q92547 1522 aa22.53■■□□□ 1.2
RPS27-203ENST00000477151 CHD1O14646 1710 aa22.51■■□□□ 1.19
RPS27-203ENST00000477151 ABCC8Q09428 1581 aa22.5■■□□□ 1.19
RPS27-203ENST00000477151 ARAP1Q96P48 1450 aa22.47■■□□□ 1.19
RPS27-203ENST00000477151 FBLN2P98095 1184 aa22.44■■□□□ 1.18
RPS27-203ENST00000477151 DNMBPQ6XZF7 1577 aa22.44■■□□□ 1.18
RPS27-203ENST00000477151 AEBP2Q6ZN18 517 aaPredicted RBP22.41■■□□□ 1.18
RPS27-203ENST00000477151 CCDC88BA6NC98 1476 aa22.4■■□□□ 1.18
RPS27-203ENST00000477151 AQRO60306 1485 aaKnown RBP eCLIP22.37■■□□□ 1.173e-12■■■■■ 39.2
RPS27-203ENST00000477151 TARBP1Q13395 1621 aaKnown RBP22.34■■□□□ 1.17
RPS27-203ENST00000477151 POLA1P09884 1462 aaPredicted RBP22.26■■□□□ 1.15
RPS27-203ENST00000477151 SYNJ1O43426 1573 aa22.22■■□□□ 1.15
RPS27-203ENST00000477151 SNAPC4Q5SXM2 1469 aa22.2■■□□□ 1.14
RPS27-203ENST00000477151 CLASP1Q7Z460 1538 aa22.19■■□□□ 1.14
RPS27-203ENST00000477151 WDR97A6NE52 1622 aa22.17■■□□□ 1.14
RPS27-203ENST00000477151 RAD54L2Q9Y4B4 1467 aa22.16■■□□□ 1.14
RPS27-203ENST00000477151 TDRD9Q8NDG6 1382 aaKnown RBP22.16■■□□□ 1.14
RPS27-203ENST00000477151 CHMP7Q8WUX9 453 aaPredicted RBP22.16■■□□□ 1.14
RPS27-203ENST00000477151 SOGA1O94964 1423 aa22.15■■□□□ 1.14
RPS27-203ENST00000477151 MAGI1Q96QZ7 1491 aaPredicted RBP22.13■■□□□ 1.13
RPS27-203ENST00000477151 FGD5Q6ZNL6 1462 aa22.07■■□□□ 1.12
RPS27-203ENST00000477151 GRIN2BQ13224 1484 aa22.06■■□□□ 1.12
RPS27-203ENST00000477151 SYNJ2O15056 1496 aa22.05■■□□□ 1.12
RPS27-203ENST00000477151 GAPVD1Q14C86 1478 aa22.03■■□□□ 1.12
RPS27-203ENST00000477151 PBRM1Q86U86 1689 aa21.96■■□□□ 1.11
RPS27-203ENST00000477151 CUX1P39880 1505 aa21.92■■□□□ 1.1
RPS27-203ENST00000477151 ABCA5Q8WWZ7 1642 aa21.8■■□□□ 1.08
RPS27-203ENST00000477151 ABCA10Q8WWZ4 1543 aa21.77■■□□□ 1.08
RPS27-203ENST00000477151 GRIN2AQ12879 1464 aa21.77■■□□□ 1.07
RPS27-203ENST00000477151 ERCC6L2Q5T890 1561 aa21.75■■□□□ 1.07
RPS27-203ENST00000477151 CEP170Q5SW79 1584 aa21.74■■□□□ 1.07
RPS27-203ENST00000477151 ADAMTS12P58397 1594 aa21.71■■□□□ 1.07
RPS27-203ENST00000477151 NUP160Q12769 1436 aa21.67■■□□□ 1.06
RPS27-203ENST00000477151 KIF13AQ9H1H9 1805 aa21.66■■□□□ 1.06
RPS27-203ENST00000477151 SHROOM2Q13796 1616 aa21.65■■□□□ 1.06
RPS27-203ENST00000477151 FHAD1B1AJZ9 1412 aa21.61■■□□□ 1.05
RPS27-203ENST00000477151 WRNQ14191 1432 aaPredicted RBP eCLIP21.61■■□□□ 1.05
RPS27-203ENST00000477151 PRG4Q92954 1404 aaPredicted RBP21.55■■□□□ 1.04
RPS27-203ENST00000477151 NPM1P06748 294 aaKnown RBP eCLIP21.53■■□□□ 1.04
RPS27-203ENST00000477151 ERICH3Q5RHP9 1530 aa21.52■■□□□ 1.04
RPS27-203ENST00000477151 FAM69CQ0P6D2 419 aa21.52■■□□□ 1.04
RPS27-203ENST00000477151 ABCC10Q5T3U5 1492 aa21.5■■□□□ 1.03
RPS27-203ENST00000477151 KDM6BO15054 1643 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms