RNA–Protein interactions for RNA: ENST00000476988.2

ITGB5-206, Transcript of integrin subunit beta 5, humanhuman

TSL 4

Gene ITGB5, Length 492 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-206ENST00000476988 AEBP2Q6ZN18 517 aaPredicted RBP25.53■■□□□ 1.68
ITGB5-206ENST00000476988 NISCHQ9Y2I1 1504 aa25.34■■□□□ 1.65
ITGB5-206ENST00000476988 CHIC1Q5VXU3 224 aa24.7■■□□□ 1.54
ITGB5-206ENST00000476988 ABCC9O60706 1549 aa22.95■■□□□ 1.26
ITGB5-206ENST00000476988 CCDC180Q9P1Z9 1646 aa22.79■■□□□ 1.24
ITGB5-206ENST00000476988 RB1CC1Q8TDY2 1594 aa21.86■■□□□ 1.09
ITGB5-206ENST00000476988 SENP3Q9H4L4 574 aaPredicted RBP21.72■■□□□ 1.07
ITGB5-206ENST00000476988 DCAF8L2P0C7V8 631 aa21.71■■□□□ 1.07
ITGB5-206ENST00000476988 PHF23Q9BUL5 403 aaPredicted RBP21.7■■□□□ 1.06
ITGB5-206ENST00000476988 NACADO15069 1562 aa21.66■■□□□ 1.06
ITGB5-206ENST00000476988 DNAJC5BQ9UF47 199 aa21.56■■□□□ 1.04
ITGB5-206ENST00000476988 PABPN1Q86U42 306 aaKnown RBP eCLIP21.4■■□□□ 1.02
ITGB5-206ENST00000476988 MYO15BQ96JP2 1530 aa21.31■■□□□ 1
ITGB5-206ENST00000476988 UNC13AQ9UPW8 1703 aa21.07■□□□□ 0.96
ITGB5-206ENST00000476988 BICRAQ9NZM4 1560 aa21.01■□□□□ 0.95
ITGB5-206ENST00000476988 SHROOM4Q9ULL8 1493 aa20.97■□□□□ 0.95
ITGB5-206ENST00000476988 DCAF1Q9Y4B6 1507 aa20.95■□□□□ 0.94
ITGB5-206ENST00000476988 ZCCHC6Q5VYS8 1495 aaKnown RBP20.93■□□□□ 0.94
ITGB5-206ENST00000476988 CECR2Q9BXF3 1484 aa20.75■□□□□ 0.91
ITGB5-206ENST00000476988 SCRIBQ14160 1630 aa20.73■□□□□ 0.91
ITGB5-206ENST00000476988 CC2D2AQ9P2K1 1620 aa20.68■□□□□ 0.9
ITGB5-206ENST00000476988 EIF4G1Q04637 1599 aaKnown RBP20.62■□□□□ 0.89
ITGB5-206ENST00000476988 FOXD1Q16676 465 aa20.18■□□□□ 0.82
ITGB5-206ENST00000476988 DNAJC5Q9H3Z4 198 aa20.1■□□□□ 0.81
ITGB5-206ENST00000476988 NCAPD3P42695 1498 aa19.99■□□□□ 0.79
ITGB5-206ENST00000476988 ERCC6Q03468 1493 aa19.98■□□□□ 0.79
ITGB5-206ENST00000476988 PLPPR3Q6T4P5 718 aa19.97■□□□□ 0.79
ITGB5-206ENST00000476988 CUX2O14529 1486 aa19.93■□□□□ 0.78
ITGB5-206ENST00000476988 SMARCA2P51531 1590 aa19.88■□□□□ 0.77
ITGB5-206ENST00000476988 ATAD2BQ9ULI0 1458 aa19.86■□□□□ 0.77
ITGB5-206ENST00000476988 HMGXB3Q12766 1538 aa19.79■□□□□ 0.76
ITGB5-206ENST00000476988 SMARCA4P51532 1647 aa19.76■□□□□ 0.75
ITGB5-206ENST00000476988 BAZ1AQ9NRL2 1556 aaPredicted RBP19.75■□□□□ 0.75
ITGB5-206ENST00000476988 BAZ1BQ9UIG0 1483 aaKnown RBP19.74■□□□□ 0.75
ITGB5-206ENST00000476988 NESP48681 1621 aa19.59■□□□□ 0.73
ITGB5-206ENST00000476988 PDS5BQ9NTI5 1447 aa19.58■□□□□ 0.72
ITGB5-206ENST00000476988 PEG3Q9GZU2 1588 aa19.57■□□□□ 0.72
ITGB5-206ENST00000476988 LAMC3Q9Y6N6 1575 aa19.57■□□□□ 0.72
ITGB5-206ENST00000476988 MROH2BQ7Z745 1585 aa19.45■□□□□ 0.7
ITGB5-206ENST00000476988 CADPSQ9ULU8 1353 aa19.42■□□□□ 0.7
ITGB5-206ENST00000476988 THOC2Q8NI27 1593 aaKnown RBP19.4■□□□□ 0.7
ITGB5-206ENST00000476988 MRC2Q9UBG0 1479 aa19.3■□□□□ 0.68
ITGB5-206ENST00000476988 KIF21AQ7Z4S6 1674 aa19.3■□□□□ 0.68
ITGB5-206ENST00000476988 PPP6R1Q9UPN7 881 aa19.23■□□□□ 0.67
ITGB5-206ENST00000476988 CEP164Q9UPV0 1460 aa19.22■□□□□ 0.67
ITGB5-206ENST00000476988 ADRA2BP18089 450 aa19.21■□□□□ 0.67
ITGB5-206ENST00000476988 TRIM41Q8WV44 630 aa19.21■□□□□ 0.67
ITGB5-206ENST00000476988 WIZO95785 1651 aa19.2■□□□□ 0.66
ITGB5-206ENST00000476988 WDR62O43379 1518 aa19.19■□□□□ 0.66
ITGB5-206ENST00000476988 FANCD2Q9BXW9 1451 aa19.16■□□□□ 0.66
ITGB5-206ENST00000476988 OSCARQ8IYS5 282 aa19.12■□□□□ 0.65
ITGB5-206ENST00000476988 CFTRP13569 1480 aa19.1■□□□□ 0.65
ITGB5-206ENST00000476988 RSF1Q96T23 1441 aaPredicted RBP19.07■□□□□ 0.64
ITGB5-206ENST00000476988 TOP2AP11388 1531 aaKnown RBP19.03■□□□□ 0.64
ITGB5-206ENST00000476988 PIAS4Q8N2W9 510 aaPredicted RBP18.99■□□□□ 0.63
ITGB5-206ENST00000476988 URB2Q14146 1524 aaKnown RBP18.9■□□□□ 0.62
ITGB5-206ENST00000476988 ABCC8Q09428 1581 aa18.86■□□□□ 0.61
ITGB5-206ENST00000476988 IFT140Q96RY7 1462 aa18.86■□□□□ 0.61
ITGB5-206ENST00000476988 CCDC88BA6NC98 1476 aa18.82■□□□□ 0.6
ITGB5-206ENST00000476988 PRDM2Q13029 1718 aa18.78■□□□□ 0.6
ITGB5-206ENST00000476988 TOPBP1Q92547 1522 aa18.73■□□□□ 0.59
ITGB5-206ENST00000476988 MSH5O43196 834 aa18.72■□□□□ 0.59
ITGB5-206ENST00000476988 ZNF608Q9ULD9 1512 aaPredicted RBP18.69■□□□□ 0.58
ITGB5-206ENST00000476988 FBLN2P98095 1184 aa18.69■□□□□ 0.58
ITGB5-206ENST00000476988 DNMBPQ6XZF7 1577 aa18.67■□□□□ 0.58
ITGB5-206ENST00000476988 RIMBP3CA6NJZ7 1639 aa18.63■□□□□ 0.57
ITGB5-206ENST00000476988 RIMBP3BA6NNM3 1639 aa18.63■□□□□ 0.57
ITGB5-206ENST00000476988 RIMBP3Q9UFD9 1639 aa18.63■□□□□ 0.57
ITGB5-206ENST00000476988 CYB5RLQ6IPT4 315 aa18.63■□□□□ 0.57
ITGB5-206ENST00000476988 ARHGEF11O15085 1522 aa18.61■□□□□ 0.57
ITGB5-206ENST00000476988 EIF4G3O43432 1585 aaKnown RBP18.59■□□□□ 0.57
ITGB5-206ENST00000476988 AQRO60306 1485 aaKnown RBP eCLIP18.58■□□□□ 0.57
ITGB5-206ENST00000476988 TRHP20396 242 aaPredicted RBP18.57■□□□□ 0.56
ITGB5-206ENST00000476988 SOGA1O94964 1423 aa18.56■□□□□ 0.56
ITGB5-206ENST00000476988 CHMP7Q8WUX9 453 aaPredicted RBP18.54■□□□□ 0.56
ITGB5-206ENST00000476988 POLA1P09884 1462 aaPredicted RBP18.52■□□□□ 0.56
ITGB5-206ENST00000476988 TARBP1Q13395 1621 aaKnown RBP18.49■□□□□ 0.55
ITGB5-206ENST00000476988 TDRD9Q8NDG6 1382 aaKnown RBP18.48■□□□□ 0.55
ITGB5-206ENST00000476988 WDR97A6NE52 1622 aa18.46■□□□□ 0.55
ITGB5-206ENST00000476988 RAD54L2Q9Y4B4 1467 aa18.44■□□□□ 0.54
ITGB5-206ENST00000476988 CHD1O14646 1710 aa18.43■□□□□ 0.54
ITGB5-206ENST00000476988 FGD5Q6ZNL6 1462 aa18.4■□□□□ 0.54
ITGB5-206ENST00000476988 MAGI1Q96QZ7 1491 aaPredicted RBP18.4■□□□□ 0.54
ITGB5-206ENST00000476988 GRIN2BQ13224 1484 aa18.39■□□□□ 0.54
ITGB5-206ENST00000476988 SNAPC4Q5SXM2 1469 aa18.39■□□□□ 0.54
ITGB5-206ENST00000476988 SYNJ1O43426 1573 aa18.38■□□□□ 0.53
ITGB5-206ENST00000476988 ARAP1Q96P48 1450 aa18.37■□□□□ 0.53
ITGB5-206ENST00000476988 SYNJ2O15056 1496 aa18.33■□□□□ 0.53
ITGB5-206ENST00000476988 CUX1P39880 1505 aa18.29■□□□□ 0.52
ITGB5-206ENST00000476988 GAPVD1Q14C86 1478 aa18.29■□□□□ 0.52
ITGB5-206ENST00000476988 SUPT5HO00267 1087 aaKnown RBP18.27■□□□□ 0.52
ITGB5-206ENST00000476988 CLASP1Q7Z460 1538 aa18.25■□□□□ 0.51
ITGB5-206ENST00000476988 WRNQ14191 1432 aaPredicted RBP eCLIP18.22■□□□□ 0.51
ITGB5-206ENST00000476988 ABCA10Q8WWZ4 1543 aa18.2■□□□□ 0.5
ITGB5-206ENST00000476988 PBRM1Q86U86 1689 aa18.15■□□□□ 0.5
ITGB5-206ENST00000476988 GRIN2AQ12879 1464 aa18.1■□□□□ 0.49
ITGB5-206ENST00000476988 ABCA5Q8WWZ7 1642 aa18.09■□□□□ 0.49
ITGB5-206ENST00000476988 FHAD1B1AJZ9 1412 aa18.08■□□□□ 0.49
ITGB5-206ENST00000476988 NPM1P06748 294 aaKnown RBP eCLIP18.05■□□□□ 0.48
ITGB5-206ENST00000476988 NUP160Q12769 1436 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms