RNA–Protein interactions for RNA: ENST00000476908.1

TRIM33-204, Transcript of tripartite motif containing 33, humanhuman

TSL 2

Gene TRIM33, Length 1,461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM33-204ENST00000476908 AEBP2Q6ZN18 517 aaPredicted RBP25.56■■□□□ 1.68
TRIM33-204ENST00000476908 NISCHQ9Y2I1 1504 aa23.95■■□□□ 1.42
TRIM33-204ENST00000476908 CHIC1Q5VXU3 224 aa23.94■■□□□ 1.42
TRIM33-204ENST00000476908 POTEDQ86YR6 584 aa22.28■■□□□ 1.16
TRIM33-204ENST00000476908 SENP3Q9H4L4 574 aaPredicted RBP22.15■■□□□ 1.14
TRIM33-204ENST00000476908 PHF23Q9BUL5 403 aaPredicted RBP21.58■■□□□ 1.04
TRIM33-204ENST00000476908 CCDC180Q9P1Z9 1646 aa21.51■■□□□ 1.03
TRIM33-204ENST00000476908 ABCC9O60706 1549 aa21.46■■□□□ 1.03
TRIM33-204ENST00000476908 FOXD1Q16676 465 aa20.77■□□□□ 0.92
TRIM33-204ENST00000476908 RB1CC1Q8TDY2 1594 aa20.43■□□□□ 0.86
TRIM33-204ENST00000476908 NACADO15069 1562 aa20.29■□□□□ 0.84
TRIM33-204ENST00000476908 DCAF8L2P0C7V8 631 aa20.17■□□□□ 0.82
TRIM33-204ENST00000476908 MSH5O43196 834 aa20.13■□□□□ 0.81
TRIM33-204ENST00000476908 DNAJC5BQ9UF47 199 aa20.11■□□□□ 0.81
TRIM33-204ENST00000476908 UNC13AQ9UPW8 1703 aa20.07■□□□□ 0.8
TRIM33-204ENST00000476908 MYO15BQ96JP2 1530 aa19.99■□□□□ 0.79
TRIM33-204ENST00000476908 PABPN1Q86U42 306 aaKnown RBP eCLIP19.98■□□□□ 0.79
TRIM33-204ENST00000476908 BICRAQ9NZM4 1560 aa19.88■□□□□ 0.77
TRIM33-204ENST00000476908 ZCCHC6Q5VYS8 1495 aaKnown RBP19.86■□□□□ 0.77
TRIM33-204ENST00000476908 DCAF1Q9Y4B6 1507 aa19.77■□□□□ 0.75
TRIM33-204ENST00000476908 SCRIBQ14160 1630 aa19.61■□□□□ 0.73
TRIM33-204ENST00000476908 SHROOM4Q9ULL8 1493 aa19.53■□□□□ 0.72
TRIM33-204ENST00000476908 CC2D2AQ9P2K1 1620 aa19.4■□□□□ 0.7
TRIM33-204ENST00000476908 EIF4G1Q04637 1599 aaKnown RBP19.36■□□□□ 0.69
TRIM33-204ENST00000476908 CECR2Q9BXF3 1484 aa19.32■□□□□ 0.68
TRIM33-204ENST00000476908 PIAS4Q8N2W9 510 aaPredicted RBP19.02■□□□□ 0.63
TRIM33-204ENST00000476908 NCAPD3P42695 1498 aa18.72■□□□□ 0.59
TRIM33-204ENST00000476908 SMARCA4P51532 1647 aa18.7■□□□□ 0.58
TRIM33-204ENST00000476908 ATAD2BQ9ULI0 1458 aa18.68■□□□□ 0.58
TRIM33-204ENST00000476908 SMARCA2P51531 1590 aa18.63■□□□□ 0.57
TRIM33-204ENST00000476908 HMGXB3Q12766 1538 aa18.6■□□□□ 0.57
TRIM33-204ENST00000476908 BAZ1AQ9NRL2 1556 aaPredicted RBP18.58■□□□□ 0.56
TRIM33-204ENST00000476908 ERCC6Q03468 1493 aa18.5■□□□□ 0.55
TRIM33-204ENST00000476908 PEG3Q9GZU2 1588 aa18.49■□□□□ 0.55
TRIM33-204ENST00000476908 BAZ1BQ9UIG0 1483 aaKnown RBP18.49■□□□□ 0.55
TRIM33-204ENST00000476908 MROH2BQ7Z745 1585 aa18.47■□□□□ 0.55
TRIM33-204ENST00000476908 NESP48681 1621 aa18.47■□□□□ 0.55
TRIM33-204ENST00000476908 CUX2O14529 1486 aa18.46■□□□□ 0.55
TRIM33-204ENST00000476908 DNAJC5Q9H3Z4 198 aa18.41■□□□□ 0.54
TRIM33-204ENST00000476908 LAMC3Q9Y6N6 1575 aa18.31■□□□□ 0.52
TRIM33-204ENST00000476908 WIZO95785 1651 aa18.28■□□□□ 0.52
TRIM33-204ENST00000476908 THOC2Q8NI27 1593 aaKnown RBP18.28■□□□□ 0.52
TRIM33-204ENST00000476908 KIF21AQ7Z4S6 1674 aa18.27■□□□□ 0.51
TRIM33-204ENST00000476908 CACNB1Q02641 598 aaPredicted RBP18.19■□□□□ 0.5
TRIM33-204ENST00000476908 PDS5BQ9NTI5 1447 aa18.17■□□□□ 0.5
TRIM33-204ENST00000476908 PPP6R1Q9UPN7 881 aa18.15■□□□□ 0.5
TRIM33-204ENST00000476908 CADPSQ9ULU8 1353 aa18.14■□□□□ 0.49
TRIM33-204ENST00000476908 RSF1Q96T23 1441 aaPredicted RBP18.07■□□□□ 0.48
TRIM33-204ENST00000476908 MRC2Q9UBG0 1479 aa18.04■□□□□ 0.48
TRIM33-204ENST00000476908 WDR62O43379 1518 aa18.01■□□□□ 0.47
TRIM33-204ENST00000476908 TOP2AP11388 1531 aaKnown RBP18.01■□□□□ 0.47
TRIM33-204ENST00000476908 ADRA2BP18089 450 aa18■□□□□ 0.47
TRIM33-204ENST00000476908 CEP164Q9UPV0 1460 aa17.98■□□□□ 0.47
TRIM33-204ENST00000476908 CFTRP13569 1480 aa17.96■□□□□ 0.47
TRIM33-204ENST00000476908 FANCD2Q9BXW9 1451 aa17.96■□□□□ 0.46
TRIM33-204ENST00000476908 PRDM2Q13029 1718 aa17.86■□□□□ 0.45
TRIM33-204ENST00000476908 URB2Q14146 1524 aaKnown RBP17.84■□□□□ 0.45
TRIM33-204ENST00000476908 CCDC88BA6NC98 1476 aa17.8■□□□□ 0.44
TRIM33-204ENST00000476908 TOPBP1Q92547 1522 aa17.63■□□□□ 0.41
TRIM33-204ENST00000476908 TRIM41Q8WV44 630 aa17.63■□□□□ 0.41
TRIM33-204ENST00000476908 ZNF608Q9ULD9 1512 aaPredicted RBP17.61■□□□□ 0.41
TRIM33-204ENST00000476908 IFT140Q96RY7 1462 aa17.6■□□□□ 0.41
TRIM33-204ENST00000476908 OSCARQ8IYS5 282 aa17.59■□□□□ 0.41
TRIM33-204ENST00000476908 DNMBPQ6XZF7 1577 aa17.58■□□□□ 0.4
TRIM33-204ENST00000476908 ABCC8Q09428 1581 aa17.55■□□□□ 0.4
TRIM33-204ENST00000476908 EIF4G3O43432 1585 aaKnown RBP17.53■□□□□ 0.4
TRIM33-204ENST00000476908 PLPPR3Q6T4P5 718 aa17.51■□□□□ 0.39
TRIM33-204ENST00000476908 TARBP1Q13395 1621 aaKnown RBP17.5■□□□□ 0.39
TRIM33-204ENST00000476908 POLA1P09884 1462 aaPredicted RBP17.45■□□□□ 0.38
TRIM33-204ENST00000476908 RIMBP3CA6NJZ7 1639 aa17.44■□□□□ 0.38
TRIM33-204ENST00000476908 RIMBP3BA6NNM3 1639 aa17.44■□□□□ 0.38
TRIM33-204ENST00000476908 RIMBP3Q9UFD9 1639 aa17.44■□□□□ 0.38
TRIM33-204ENST00000476908 AQRO60306 1485 aaKnown RBP eCLIP17.43■□□□□ 0.383e-6■■■■□ 24.7
TRIM33-204ENST00000476908 CHD1O14646 1710 aa17.43■□□□□ 0.38
TRIM33-204ENST00000476908 RAD54L2Q9Y4B4 1467 aa17.4■□□□□ 0.38
TRIM33-204ENST00000476908 ARHGEF11O15085 1522 aa17.37■□□□□ 0.37
TRIM33-204ENST00000476908 CUX1P39880 1505 aa17.36■□□□□ 0.37
TRIM33-204ENST00000476908 FGD5Q6ZNL6 1462 aa17.35■□□□□ 0.37
TRIM33-204ENST00000476908 SOGA1O94964 1423 aa17.35■□□□□ 0.37
TRIM33-204ENST00000476908 TDRD9Q8NDG6 1382 aaKnown RBP17.33■□□□□ 0.36
TRIM33-204ENST00000476908 DMRT2Q9Y5R5 561 aa17.3■□□□□ 0.36
TRIM33-204ENST00000476908 SUPT5HO00267 1087 aaKnown RBP17.29■□□□□ 0.36
TRIM33-204ENST00000476908 FBLN2P98095 1184 aa17.29■□□□□ 0.36
TRIM33-204ENST00000476908 WDR97A6NE52 1622 aa17.28■□□□□ 0.36
TRIM33-204ENST00000476908 SNAPC4Q5SXM2 1469 aa17.27■□□□□ 0.35
TRIM33-204ENST00000476908 ARAP1Q96P48 1450 aa17.21■□□□□ 0.35
TRIM33-204ENST00000476908 PBRM1Q86U86 1689 aa17.21■□□□□ 0.34
TRIM33-204ENST00000476908 CYB5RLQ6IPT4 315 aa17.2■□□□□ 0.34
TRIM33-204ENST00000476908 GRIN2BQ13224 1484 aa17.2■□□□□ 0.34
TRIM33-204ENST00000476908 MAGI1Q96QZ7 1491 aaPredicted RBP17.2■□□□□ 0.34
TRIM33-204ENST00000476908 CLASP1Q7Z460 1538 aa17.18■□□□□ 0.34
TRIM33-204ENST00000476908 CHMP7Q8WUX9 453 aaPredicted RBP17.16■□□□□ 0.34
TRIM33-204ENST00000476908 GAPVD1Q14C86 1478 aa17.16■□□□□ 0.34
TRIM33-204ENST00000476908 ABCA5Q8WWZ7 1642 aa17.15■□□□□ 0.34
TRIM33-204ENST00000476908 SYNJ1O43426 1573 aa17.15■□□□□ 0.34
TRIM33-204ENST00000476908 POTEHQ6S545 545 aa17.15■□□□□ 0.34
TRIM33-204ENST00000476908 SYNJ2O15056 1496 aa17.15■□□□□ 0.34
TRIM33-204ENST00000476908 ABCA10Q8WWZ4 1543 aa17.14■□□□□ 0.33
TRIM33-204ENST00000476908 BIVM-ERCC5R4GMW8 1640 aa17.1■□□□□ 0.33
TRIM33-204ENST00000476908 TOP2BQ02880 1626 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms