RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 NISCHQ9Y2I1 1504 aa51.58■■■■■ 5.85
CCDC7-206ENST00000476558 CCDC180Q9P1Z9 1646 aa44.78■■■■■ 4.76
CCDC7-206ENST00000476558 ZCCHC6Q5VYS8 1495 aaKnown RBP43.4■■■■■ 4.54
CCDC7-206ENST00000476558 DCAF1Q9Y4B6 1507 aa42.66■■■■■ 4.42
CCDC7-206ENST00000476558 DCAF8L2P0C7V8 631 aa42.37■■■■■ 4.37
CCDC7-206ENST00000476558 SHROOM4Q9ULL8 1493 aa42.26■■■■■ 4.36
CCDC7-206ENST00000476558 MYO15BQ96JP2 1530 aa42.03■■■■■ 4.32
CCDC7-206ENST00000476558 ABCC9O60706 1549 aa42■■■■■ 4.31
CCDC7-206ENST00000476558 NACADO15069 1562 aa41.62■■■■■ 4.25
CCDC7-206ENST00000476558 SCRIBQ14160 1630 aa41.2■■■■■ 4.19
CCDC7-206ENST00000476558 RB1CC1Q8TDY2 1594 aa41.15■■■■■ 4.18
CCDC7-206ENST00000476558 SUPT5HO00267 1087 aaKnown RBP40.83■■■■■ 4.13
CCDC7-206ENST00000476558 UNC13AQ9UPW8 1703 aa40.42■■■■■ 4.06
CCDC7-206ENST00000476558 RSF1Q96T23 1441 aaPredicted RBP40.17■■■■■ 4.02
CCDC7-206ENST00000476558 CECR2Q9BXF3 1484 aa40.07■■■■■ 4
CCDC7-206ENST00000476558 BICRAQ9NZM4 1560 aa40■■■■□ 3.99
CCDC7-206ENST00000476558 MROH2BQ7Z745 1585 aa39.87■■■■□ 3.97
CCDC7-206ENST00000476558 BAZ1AQ9NRL2 1556 aaPredicted RBP39.76■■■■□ 3.96
CCDC7-206ENST00000476558 PABPN1Q86U42 306 aaKnown RBP eCLIP39.69■■■■□ 3.94
CCDC7-206ENST00000476558 SMARCA4P51532 1647 aa39.56■■■■□ 3.92
CCDC7-206ENST00000476558 WIZO95785 1651 aa39.55■■■■□ 3.92
CCDC7-206ENST00000476558 CHIC1Q5VXU3 224 aa39.36■■■■□ 3.89
CCDC7-206ENST00000476558 TOP2AP11388 1531 aaKnown RBP39.13■■■■□ 3.86
CCDC7-206ENST00000476558 PEG3Q9GZU2 1588 aa39.1■■■■□ 3.85
CCDC7-206ENST00000476558 ATAD2BQ9ULI0 1458 aa38.83■■■■□ 3.81
CCDC7-206ENST00000476558 SMARCA2P51531 1590 aa38.8■■■■□ 3.8
CCDC7-206ENST00000476558 CCDC88BA6NC98 1476 aa38.77■■■■□ 3.8
CCDC7-206ENST00000476558 EIF4G1Q04637 1599 aaKnown RBP38.71■■■■□ 3.79
CCDC7-206ENST00000476558 BAZ1BQ9UIG0 1483 aaKnown RBP38.58■■■■□ 3.77
CCDC7-206ENST00000476558 NCAPD3P42695 1498 aa38.45■■■■□ 3.75
CCDC7-206ENST00000476558 HMGXB3Q12766 1538 aa38.4■■■■□ 3.74
CCDC7-206ENST00000476558 TRIM41Q8WV44 630 aa38.38■■■■□ 3.73
CCDC7-206ENST00000476558 ABCC8Q09428 1581 aa38.05■■■■□ 3.68
CCDC7-206ENST00000476558 CC2D2AQ9P2K1 1620 aa38.04■■■■□ 3.68
CCDC7-206ENST00000476558 LOC105371045A0A1W2PR82 267 aa37.87■■■■□ 3.65
CCDC7-206ENST00000476558 WRNQ14191 1432 aaPredicted RBP eCLIP37.74■■■■□ 3.63
CCDC7-206ENST00000476558 CFTRP13569 1480 aa37.69■■■■□ 3.62
CCDC7-206ENST00000476558 FAM9AQ8IZU1 332 aaPredicted RBP37.66■■■■□ 3.62
CCDC7-206ENST00000476558 SYNJ1O43426 1573 aa37.61■■■■□ 3.61
CCDC7-206ENST00000476558 PRDM2Q13029 1718 aa37.49■■■■□ 3.59
CCDC7-206ENST00000476558 CADPSQ9ULU8 1353 aa37.46■■■■□ 3.59
CCDC7-206ENST00000476558 SOGA1O94964 1423 aa37.43■■■■□ 3.58
CCDC7-206ENST00000476558 TOP2BQ02880 1626 aa37.43■■■■□ 3.58
CCDC7-206ENST00000476558 EEA1Q15075 1411 aa37.39■■■■□ 3.58
CCDC7-206ENST00000476558 BIVM-ERCC5R4GMW8 1640 aa37.38■■■■□ 3.58
CCDC7-206ENST00000476558 RUSC2Q8N2Y8 1516 aa37.29■■■■□ 3.56
CCDC7-206ENST00000476558 CUX1P39880 1505 aa37.25■■■■□ 3.55
CCDC7-206ENST00000476558 CSRNP3Q8WYN3 585 aa37.17■■■■□ 3.54
CCDC7-206ENST00000476558 EHMT2Q96KQ7 1210 aa37.08■■■■□ 3.53
CCDC7-206ENST00000476558 DNAJC5BQ9UF47 199 aa37.06■■■■□ 3.52
CCDC7-206ENST00000476558 LAMC3Q9Y6N6 1575 aa37.04■■■■□ 3.52
CCDC7-206ENST00000476558 FANCD2Q9BXW9 1451 aa37.04■■■■□ 3.52
CCDC7-206ENST00000476558 NESP48681 1621 aa37.03■■■■□ 3.52
CCDC7-206ENST00000476558 KIF21BO75037 1637 aa36.91■■■■□ 3.5
CCDC7-206ENST00000476558 GOLGA3Q08378 1498 aa36.87■■■■□ 3.49
CCDC7-206ENST00000476558 TNIKQ9UKE5 1360 aa36.87■■■■□ 3.49
CCDC7-206ENST00000476558 CEP164Q9UPV0 1460 aa36.86■■■■□ 3.49
CCDC7-206ENST00000476558 DNMBPQ6XZF7 1577 aa36.77■■■■□ 3.48
CCDC7-206ENST00000476558 FGD5Q6ZNL6 1462 aa36.76■■■■□ 3.48
CCDC7-206ENST00000476558 KIF27Q86VH2 1401 aa36.74■■■■□ 3.47
CCDC7-206ENST00000476558 PDS5BQ9NTI5 1447 aa36.72■■■■□ 3.47
CCDC7-206ENST00000476558 TOPBP1Q92547 1522 aa36.69■■■■□ 3.46
CCDC7-206ENST00000476558 CEP162Q5TB80 1403 aa36.68■■■■□ 3.46
CCDC7-206ENST00000476558 UBTFP17480 764 aaKnown RBP36.66■■■■□ 3.46
CCDC7-206ENST00000476558 PRXQ9BXM0 1461 aa36.66■■■■□ 3.46
CCDC7-206ENST00000476558 RAPGEF2Q9Y4G8 1499 aa36.64■■■■□ 3.46
CCDC7-206ENST00000476558 ERICH3Q5RHP9 1530 aa36.59■■■■□ 3.45
CCDC7-206ENST00000476558 URB2Q14146 1524 aaKnown RBP36.59■■■■□ 3.45
CCDC7-206ENST00000476558 KIF21AQ7Z4S6 1674 aa36.57■■■■□ 3.45
CCDC7-206ENST00000476558 CUX2O14529 1486 aa36.57■■■■□ 3.44
CCDC7-206ENST00000476558 POLA1P09884 1462 aaPredicted RBP36.54■■■■□ 3.44
CCDC7-206ENST00000476558 ABCA10Q8WWZ4 1543 aa36.47■■■■□ 3.43
CCDC7-206ENST00000476558 IGF1RP08069 1367 aa36.45■■■■□ 3.43
CCDC7-206ENST00000476558 PCGF6Q9BYE7 350 aa36.45■■■■□ 3.43
CCDC7-206ENST00000476558 RAD54L2Q9Y4B4 1467 aa36.43■■■■□ 3.42
CCDC7-206ENST00000476558 TRIM26Q12899 539 aaPredicted RBP36.38■■■■□ 3.41
CCDC7-206ENST00000476558 WDR97A6NE52 1622 aa36.32■■■■□ 3.4
CCDC7-206ENST00000476558 CLIP1P30622 1438 aa36.31■■■■□ 3.4
CCDC7-206ENST00000476558 MRC2Q9UBG0 1479 aa36.24■■■■□ 3.39
CCDC7-206ENST00000476558 CARMIL1Q5VZK9 1371 aa36.23■■■■□ 3.39
CCDC7-206ENST00000476558 TARBP1Q13395 1621 aaKnown RBP36.15■■■■□ 3.38
CCDC7-206ENST00000476558 ABCA5Q8WWZ7 1642 aa36.14■■■■□ 3.38
CCDC7-206ENST00000476558 CUL7Q14999 1698 aa36.08■■■■□ 3.37
CCDC7-206ENST00000476558 WDR62O43379 1518 aa36.06■■■■□ 3.36
CCDC7-206ENST00000476558 VPS8Q8N3P4 1428 aa36.06■■■■□ 3.36
CCDC7-206ENST00000476558 TDRD9Q8NDG6 1382 aaKnown RBP36.03■■■■□ 3.36
CCDC7-206ENST00000476558 GAPVD1Q14C86 1478 aa36.02■■■■□ 3.36
CCDC7-206ENST00000476558 PPARGC1BQ86YN6 1023 aaKnown RBP35.99■■■■□ 3.35
CCDC7-206ENST00000476558 ARAP1Q96P48 1450 aa35.95■■■■□ 3.35
CCDC7-206ENST00000476558 RANGAP1P46060 587 aaPredicted RBP35.92■■■■□ 3.34
CCDC7-206ENST00000476558 ERCC6Q03468 1493 aa35.91■■■■□ 3.34
CCDC7-206ENST00000476558 ARHGAP35Q9NRY4 1499 aa35.88■■■■□ 3.33
CCDC7-206ENST00000476558 THOC2Q8NI27 1593 aaKnown RBP35.88■■■■□ 3.33
CCDC7-206ENST00000476558 IFT140Q96RY7 1462 aa35.85■■■■□ 3.33
CCDC7-206ENST00000476558 PBRM1Q86U86 1689 aa35.78■■■■□ 3.32
CCDC7-206ENST00000476558 AQRO60306 1485 aaKnown RBP eCLIP35.76■■■■□ 3.31
CCDC7-206ENST00000476558 CTTNBP2Q8WZ74 1663 aa35.73■■■■□ 3.31
CCDC7-206ENST00000476558 HRCP23327 699 aa35.73■■■■□ 3.31
CCDC7-206ENST00000476558 ZNF608Q9ULD9 1512 aaPredicted RBP35.68■■■■□ 3.3
CCDC7-206ENST00000476558 GRIN2BQ13224 1484 aa35.67■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 209.9 ms