RNA–Protein interactions for RNA: ENST00000476501.3

RN7SL559P-201, Transcript of RNA, 7SL, cytoplasmic 559, pseudogene, humanhuman

BASIC

Gene RN7SL559P, Length 297 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL559P-201ENST00000476501 NISCHQ9Y2I1 1504 aa28.48■■■□□ 2.15
RN7SL559P-201ENST00000476501 ABCC9O60706 1549 aa26.39■■□□□ 1.82
RN7SL559P-201ENST00000476501 CCDC180Q9P1Z9 1646 aa25.79■■□□□ 1.72
RN7SL559P-201ENST00000476501 DNAJC5BQ9UF47 199 aa25.18■■□□□ 1.62
RN7SL559P-201ENST00000476501 RB1CC1Q8TDY2 1594 aa24.85■■□□□ 1.57
RN7SL559P-201ENST00000476501 NACADO15069 1562 aa24.51■■□□□ 1.51
RN7SL559P-201ENST00000476501 PABPN1Q86U42 306 aaKnown RBP eCLIP24.51■■□□□ 1.51
RN7SL559P-201ENST00000476501 DCAF8L2P0C7V8 631 aa24.47■■□□□ 1.51
RN7SL559P-201ENST00000476501 UNC13AQ9UPW8 1703 aa24.3■■□□□ 1.48
RN7SL559P-201ENST00000476501 BICRAQ9NZM4 1560 aa24.09■■□□□ 1.45
RN7SL559P-201ENST00000476501 MYO15BQ96JP2 1530 aa23.91■■□□□ 1.42
RN7SL559P-201ENST00000476501 CECR2Q9BXF3 1484 aa23.81■■□□□ 1.4
RN7SL559P-201ENST00000476501 CC2D2AQ9P2K1 1620 aa23.79■■□□□ 1.4
RN7SL559P-201ENST00000476501 SHROOM4Q9ULL8 1493 aa23.68■■□□□ 1.38
RN7SL559P-201ENST00000476501 EIF4G1Q04637 1599 aaKnown RBP23.58■■□□□ 1.37
RN7SL559P-201ENST00000476501 SCRIBQ14160 1630 aa23.55■■□□□ 1.36
RN7SL559P-201ENST00000476501 DNAJC5Q9H3Z4 198 aa23.52■■□□□ 1.36
RN7SL559P-201ENST00000476501 ZCCHC6Q5VYS8 1495 aaKnown RBP23.46■■□□□ 1.35
RN7SL559P-201ENST00000476501 DCAF1Q9Y4B6 1507 aa23.43■■□□□ 1.34
RN7SL559P-201ENST00000476501 CUX2O14529 1486 aa22.92■■□□□ 1.26
RN7SL559P-201ENST00000476501 ERCC6Q03468 1493 aa22.87■■□□□ 1.25
RN7SL559P-201ENST00000476501 NCAPD3P42695 1498 aa22.6■■□□□ 1.21
RN7SL559P-201ENST00000476501 NESP48681 1621 aa22.5■■□□□ 1.19
RN7SL559P-201ENST00000476501 ATAD2BQ9ULI0 1458 aa22.49■■□□□ 1.19
RN7SL559P-201ENST00000476501 SMARCA2P51531 1590 aa22.42■■□□□ 1.18
RN7SL559P-201ENST00000476501 TRIM41Q8WV44 630 aa22.41■■□□□ 1.18
RN7SL559P-201ENST00000476501 HMGXB3Q12766 1538 aa22.41■■□□□ 1.18
RN7SL559P-201ENST00000476501 SMARCA4P51532 1647 aa22.35■■□□□ 1.17
RN7SL559P-201ENST00000476501 THOC2Q8NI27 1593 aaKnown RBP22.34■■□□□ 1.17
RN7SL559P-201ENST00000476501 BAZ1BQ9UIG0 1483 aaKnown RBP22.29■■□□□ 1.16
RN7SL559P-201ENST00000476501 LAMC3Q9Y6N6 1575 aa22.23■■□□□ 1.15
RN7SL559P-201ENST00000476501 KIF21AQ7Z4S6 1674 aa22.21■■□□□ 1.15
RN7SL559P-201ENST00000476501 BAZ1AQ9NRL2 1556 aaPredicted RBP22.16■■□□□ 1.14
RN7SL559P-201ENST00000476501 PDS5BQ9NTI5 1447 aa22.14■■□□□ 1.14
RN7SL559P-201ENST00000476501 PEG3Q9GZU2 1588 aa22.07■■□□□ 1.12
RN7SL559P-201ENST00000476501 MRC2Q9UBG0 1479 aa21.97■■□□□ 1.11
RN7SL559P-201ENST00000476501 MROH2BQ7Z745 1585 aa21.95■■□□□ 1.11
RN7SL559P-201ENST00000476501 CADPSQ9ULU8 1353 aa21.93■■□□□ 1.1
RN7SL559P-201ENST00000476501 WDR62O43379 1518 aa21.9■■□□□ 1.1
RN7SL559P-201ENST00000476501 OSCARQ8IYS5 282 aa21.84■■□□□ 1.09
RN7SL559P-201ENST00000476501 CEP164Q9UPV0 1460 aa21.8■■□□□ 1.08
RN7SL559P-201ENST00000476501 FANCD2Q9BXW9 1451 aa21.71■■□□□ 1.07
RN7SL559P-201ENST00000476501 WIZO95785 1651 aa21.71■■□□□ 1.07
RN7SL559P-201ENST00000476501 RIMBP3CA6NJZ7 1639 aa21.6■■□□□ 1.05
RN7SL559P-201ENST00000476501 RIMBP3BA6NNM3 1639 aa21.6■■□□□ 1.05
RN7SL559P-201ENST00000476501 RIMBP3Q9UFD9 1639 aa21.6■■□□□ 1.05
RN7SL559P-201ENST00000476501 URB2Q14146 1524 aaKnown RBP21.55■■□□□ 1.04
RN7SL559P-201ENST00000476501 CFTRP13569 1480 aa21.54■■□□□ 1.04
RN7SL559P-201ENST00000476501 ARHGEF11O15085 1522 aa21.45■■□□□ 1.02
RN7SL559P-201ENST00000476501 TRHP20396 242 aaPredicted RBP21.41■■□□□ 1.02
RN7SL559P-201ENST00000476501 CYB5RLQ6IPT4 315 aa21.4■■□□□ 1.02
RN7SL559P-201ENST00000476501 ZNF608Q9ULD9 1512 aaPredicted RBP21.39■■□□□ 1.01
RN7SL559P-201ENST00000476501 IFT140Q96RY7 1462 aa21.35■■□□□ 1.01
RN7SL559P-201ENST00000476501 PRDM2Q13029 1718 aa21.35■■□□□ 1.01
RN7SL559P-201ENST00000476501 TOP2AP11388 1531 aaKnown RBP21.34■■□□□ 1.01
RN7SL559P-201ENST00000476501 RSF1Q96T23 1441 aaPredicted RBP21.29■■□□□ 1
RN7SL559P-201ENST00000476501 EIF4G3O43432 1585 aaKnown RBP21.25■□□□□ 0.99
RN7SL559P-201ENST00000476501 CHD1O14646 1710 aa21.23■□□□□ 0.99
RN7SL559P-201ENST00000476501 TOPBP1Q92547 1522 aa21.23■□□□□ 0.99
RN7SL559P-201ENST00000476501 FBLN2P98095 1184 aa21.22■□□□□ 0.99
RN7SL559P-201ENST00000476501 AEBP2Q6ZN18 517 aaPredicted RBP21.2■□□□□ 0.98
RN7SL559P-201ENST00000476501 ARAP1Q96P48 1450 aa21.2■□□□□ 0.98
RN7SL559P-201ENST00000476501 AQRO60306 1485 aaKnown RBP eCLIP21.14■□□□□ 0.98
RN7SL559P-201ENST00000476501 ABCC8Q09428 1581 aa21.14■□□□□ 0.97
RN7SL559P-201ENST00000476501 CCDC88BA6NC98 1476 aa21.13■□□□□ 0.97
RN7SL559P-201ENST00000476501 DNMBPQ6XZF7 1577 aa21.1■□□□□ 0.97
RN7SL559P-201ENST00000476501 TARBP1Q13395 1621 aaKnown RBP21.06■□□□□ 0.96
RN7SL559P-201ENST00000476501 POLA1P09884 1462 aaPredicted RBP20.97■□□□□ 0.95
RN7SL559P-201ENST00000476501 TDRD9Q8NDG6 1382 aaKnown RBP20.95■□□□□ 0.94
RN7SL559P-201ENST00000476501 RAD54L2Q9Y4B4 1467 aa20.94■□□□□ 0.94
RN7SL559P-201ENST00000476501 CHMP7Q8WUX9 453 aaPredicted RBP20.92■□□□□ 0.94
RN7SL559P-201ENST00000476501 SNAPC4Q5SXM2 1469 aa20.92■□□□□ 0.94
RN7SL559P-201ENST00000476501 SOGA1O94964 1423 aa20.9■□□□□ 0.94
RN7SL559P-201ENST00000476501 SYNJ1O43426 1573 aa20.89■□□□□ 0.94
RN7SL559P-201ENST00000476501 CLASP1Q7Z460 1538 aa20.89■□□□□ 0.94
RN7SL559P-201ENST00000476501 MAGI1Q96QZ7 1491 aaPredicted RBP20.8■□□□□ 0.92
RN7SL559P-201ENST00000476501 WDR97A6NE52 1622 aa20.79■□□□□ 0.92
RN7SL559P-201ENST00000476501 FGD5Q6ZNL6 1462 aa20.78■□□□□ 0.92
RN7SL559P-201ENST00000476501 GRIN2BQ13224 1484 aa20.76■□□□□ 0.91
RN7SL559P-201ENST00000476501 GAPVD1Q14C86 1478 aa20.76■□□□□ 0.91
RN7SL559P-201ENST00000476501 SYNJ2O15056 1496 aa20.75■□□□□ 0.91
RN7SL559P-201ENST00000476501 PBRM1Q86U86 1689 aa20.69■□□□□ 0.9
RN7SL559P-201ENST00000476501 CUX1P39880 1505 aa20.67■□□□□ 0.9
RN7SL559P-201ENST00000476501 ERCC6L2Q5T890 1561 aa20.57■□□□□ 0.88
RN7SL559P-201ENST00000476501 ABCA5Q8WWZ7 1642 aa20.5■□□□□ 0.87
RN7SL559P-201ENST00000476501 CEP170Q5SW79 1584 aa20.49■□□□□ 0.87
RN7SL559P-201ENST00000476501 GRIN2AQ12879 1464 aa20.49■□□□□ 0.87
RN7SL559P-201ENST00000476501 ABCA10Q8WWZ4 1543 aa20.48■□□□□ 0.87
RN7SL559P-201ENST00000476501 KIF13AQ9H1H9 1805 aa20.46■□□□□ 0.87
RN7SL559P-201ENST00000476501 ADAMTS12P58397 1594 aa20.41■□□□□ 0.86
RN7SL559P-201ENST00000476501 NUP160Q12769 1436 aa20.4■□□□□ 0.86
RN7SL559P-201ENST00000476501 SHROOM2Q13796 1616 aa20.38■□□□□ 0.85
RN7SL559P-201ENST00000476501 FAM69CQ0P6D2 419 aa20.35■□□□□ 0.85
RN7SL559P-201ENST00000476501 FHAD1B1AJZ9 1412 aa20.33■□□□□ 0.84
RN7SL559P-201ENST00000476501 WRNQ14191 1432 aaPredicted RBP eCLIP20.33■□□□□ 0.84
RN7SL559P-201ENST00000476501 NPM1P06748 294 aaKnown RBP eCLIP20.32■□□□□ 0.84
RN7SL559P-201ENST00000476501 PRG4Q92954 1404 aaPredicted RBP20.32■□□□□ 0.84
RN7SL559P-201ENST00000476501 JPH4Q96JJ6 628 aa20.26■□□□□ 0.83
RN7SL559P-201ENST00000476501 ABCC10Q5T3U5 1492 aa20.25■□□□□ 0.83
RN7SL559P-201ENST00000476501 KDM6BO15054 1643 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms