RNA–Protein interactions for RNA: ENST00000476457.5

LCK-210, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 2

Gene LCK, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-210ENST00000476457 NISCHQ9Y2I1 1504 aa43.93■■■■■ 4.62
LCK-210ENST00000476457 CCDC180Q9P1Z9 1646 aa39.36■■■■□ 3.89
LCK-210ENST00000476457 ABCC9O60706 1549 aa39.36■■■■□ 3.89
LCK-210ENST00000476457 RB1CC1Q8TDY2 1594 aa37.46■■■■□ 3.59
LCK-210ENST00000476457 NACADO15069 1562 aa37.24■■■■□ 3.55
LCK-210ENST00000476457 DNAJC5BQ9UF47 199 aa37.13■■■■□ 3.53
LCK-210ENST00000476457 DCAF8L2P0C7V8 631 aa37.04■■■■□ 3.52
LCK-210ENST00000476457 MYO15BQ96JP2 1530 aa36.78■■■■□ 3.48
LCK-210ENST00000476457 PABPN1Q86U42 306 aaKnown RBP eCLIP36.62■■■■□ 3.45
LCK-210ENST00000476457 UNC13AQ9UPW8 1703 aa36.54■■■■□ 3.44
LCK-210ENST00000476457 ZCCHC6Q5VYS8 1495 aaKnown RBP36.41■■■■□ 3.42
LCK-210ENST00000476457 BICRAQ9NZM4 1560 aa36.37■■■■□ 3.41
LCK-210ENST00000476457 DCAF1Q9Y4B6 1507 aa36.32■■■■□ 3.4
LCK-210ENST00000476457 SHROOM4Q9ULL8 1493 aa35.93■■■■□ 3.34
LCK-210ENST00000476457 SCRIBQ14160 1630 aa35.83■■■■□ 3.33
LCK-210ENST00000476457 CC2D2AQ9P2K1 1620 aa35.54■■■■□ 3.28
LCK-210ENST00000476457 EIF4G1Q04637 1599 aaKnown RBP35.46■■■■□ 3.27
LCK-210ENST00000476457 CECR2Q9BXF3 1484 aa35.44■■■■□ 3.26
LCK-210ENST00000476457 NCAPD3P42695 1498 aa34.39■■■■□ 3.1
LCK-210ENST00000476457 ATAD2BQ9ULI0 1458 aa34.27■■■■□ 3.08
LCK-210ENST00000476457 SMARCA4P51532 1647 aa34.22■■■■□ 3.07
LCK-210ENST00000476457 SMARCA2P51531 1590 aa34.19■■■■□ 3.06
LCK-210ENST00000476457 HMGXB3Q12766 1538 aa34.12■■■■□ 3.05
LCK-210ENST00000476457 DNAJC5Q9H3Z4 198 aa34.09■■■■□ 3.05
LCK-210ENST00000476457 BAZ1AQ9NRL2 1556 aaPredicted RBP34.09■■■■□ 3.05
LCK-210ENST00000476457 ERCC6Q03468 1493 aa33.95■■■■□ 3.02
LCK-210ENST00000476457 BAZ1BQ9UIG0 1483 aaKnown RBP33.94■■■■□ 3.02
LCK-210ENST00000476457 CUX2O14529 1486 aa33.93■■■■□ 3.02
LCK-210ENST00000476457 PEG3Q9GZU2 1588 aa33.93■■■■□ 3.02
LCK-210ENST00000476457 MROH2BQ7Z745 1585 aa33.82■■■■□ 3
LCK-210ENST00000476457 NESP48681 1621 aa33.81■■■■□ 3
LCK-210ENST00000476457 LAMC3Q9Y6N6 1575 aa33.58■■■□□ 2.97
LCK-210ENST00000476457 THOC2Q8NI27 1593 aaKnown RBP33.5■■■□□ 2.95
LCK-210ENST00000476457 PDS5BQ9NTI5 1447 aa33.41■■■□□ 2.94
LCK-210ENST00000476457 WIZO95785 1651 aa33.39■■■□□ 2.94
LCK-210ENST00000476457 CADPSQ9ULU8 1353 aa33.35■■■□□ 2.93
LCK-210ENST00000476457 KIF21AQ7Z4S6 1674 aa33.32■■■□□ 2.92
LCK-210ENST00000476457 RSF1Q96T23 1441 aaPredicted RBP33.18■■■□□ 2.9
LCK-210ENST00000476457 MRC2Q9UBG0 1479 aa33.1■■■□□ 2.89
LCK-210ENST00000476457 TOP2AP11388 1531 aaKnown RBP33.02■■■□□ 2.88
LCK-210ENST00000476457 WDR62O43379 1518 aa33.01■■■□□ 2.87
LCK-210ENST00000476457 CFTRP13569 1480 aa32.98■■■□□ 2.87
LCK-210ENST00000476457 CEP164Q9UPV0 1460 aa32.97■■■□□ 2.87
LCK-210ENST00000476457 FANCD2Q9BXW9 1451 aa32.94■■■□□ 2.86
LCK-210ENST00000476457 URB2Q14146 1524 aaKnown RBP32.66■■■□□ 2.82
LCK-210ENST00000476457 SUPT5HO00267 1087 aaKnown RBP32.65■■■□□ 2.82
LCK-210ENST00000476457 CCDC88BA6NC98 1476 aa32.65■■■□□ 2.82
LCK-210ENST00000476457 PRDM2Q13029 1718 aa32.57■■■□□ 2.81
LCK-210ENST00000476457 TRIM41Q8WV44 630 aa32.52■■■□□ 2.8
LCK-210ENST00000476457 OSCARQ8IYS5 282 aa32.38■■■□□ 2.77
LCK-210ENST00000476457 IFT140Q96RY7 1462 aa32.34■■■□□ 2.77
LCK-210ENST00000476457 TOPBP1Q92547 1522 aa32.32■■■□□ 2.76
LCK-210ENST00000476457 ABCC8Q09428 1581 aa32.3■■■□□ 2.76
LCK-210ENST00000476457 ZNF608Q9ULD9 1512 aaPredicted RBP32.24■■■□□ 2.75
LCK-210ENST00000476457 DNMBPQ6XZF7 1577 aa32.2■■■□□ 2.75
LCK-210ENST00000476457 EIF4G3O43432 1585 aaKnown RBP32.04■■■□□ 2.72
LCK-210ENST00000476457 TARBP1Q13395 1621 aaKnown RBP32.01■■■□□ 2.72
LCK-210ENST00000476457 POLA1P09884 1462 aaPredicted RBP32■■■□□ 2.71
LCK-210ENST00000476457 RIMBP3CA6NJZ7 1639 aa32■■■□□ 2.71
LCK-210ENST00000476457 RIMBP3BA6NNM3 1639 aa32■■■□□ 2.71
LCK-210ENST00000476457 RIMBP3Q9UFD9 1639 aa32■■■□□ 2.71
LCK-210ENST00000476457 AQRO60306 1485 aaKnown RBP eCLIP31.97■■■□□ 2.71
LCK-210ENST00000476457 ARHGEF11O15085 1522 aa31.89■■■□□ 2.7
LCK-210ENST00000476457 RAD54L2Q9Y4B4 1467 aa31.87■■■□□ 2.69
LCK-210ENST00000476457 SOGA1O94964 1423 aa31.87■■■□□ 2.69
LCK-210ENST00000476457 FGD5Q6ZNL6 1462 aa31.8■■■□□ 2.68
LCK-210ENST00000476457 TDRD9Q8NDG6 1382 aaKnown RBP31.79■■■□□ 2.68
LCK-210ENST00000476457 CHD1O14646 1710 aa31.78■■■□□ 2.68
LCK-210ENST00000476457 CUX1P39880 1505 aa31.77■■■□□ 2.68
LCK-210ENST00000476457 FBLN2P98095 1184 aa31.75■■■□□ 2.67
LCK-210ENST00000476457 WDR97A6NE52 1622 aa31.73■■■□□ 2.67
LCK-210ENST00000476457 SNAPC4Q5SXM2 1469 aa31.64■■■□□ 2.66
LCK-210ENST00000476457 ARAP1Q96P48 1450 aa31.6■■■□□ 2.65
LCK-210ENST00000476457 CYB5RLQ6IPT4 315 aa31.59■■■□□ 2.65
LCK-210ENST00000476457 GRIN2BQ13224 1484 aa31.59■■■□□ 2.65
LCK-210ENST00000476457 MAGI1Q96QZ7 1491 aaPredicted RBP31.59■■■□□ 2.65
LCK-210ENST00000476457 CHMP7Q8WUX9 453 aaPredicted RBP31.56■■■□□ 2.64
LCK-210ENST00000476457 SYNJ2O15056 1496 aa31.47■■■□□ 2.63
LCK-210ENST00000476457 GAPVD1Q14C86 1478 aa31.47■■■□□ 2.63
LCK-210ENST00000476457 ABCA10Q8WWZ4 1543 aa31.47■■■□□ 2.63
LCK-210ENST00000476457 CLASP1Q7Z460 1538 aa31.46■■■□□ 2.63
LCK-210ENST00000476457 SYNJ1O43426 1573 aa31.45■■■□□ 2.63
LCK-210ENST00000476457 PBRM1Q86U86 1689 aa31.39■■■□□ 2.62
LCK-210ENST00000476457 ABCA5Q8WWZ7 1642 aa31.38■■■□□ 2.61
LCK-210ENST00000476457 WRNQ14191 1432 aaPredicted RBP eCLIP31.36■■■□□ 2.61
LCK-210ENST00000476457 TOP2BQ02880 1626 aa31.29■■■□□ 2.6
LCK-210ENST00000476457 BIVM-ERCC5R4GMW8 1640 aa31.27■■■□□ 2.6
LCK-210ENST00000476457 TRHP20396 242 aaPredicted RBP31.23■■■□□ 2.59
LCK-210ENST00000476457 GRIN2AQ12879 1464 aa31.17■■■□□ 2.58
LCK-210ENST00000476457 CHIC1Q5VXU3 224 aa31.17■■■□□ 2.58
LCK-210ENST00000476457 ADAMTS12P58397 1594 aa31.13■■■□□ 2.57
LCK-210ENST00000476457 FHAD1B1AJZ9 1412 aa31.1■■■□□ 2.57
LCK-210ENST00000476457 NUP160Q12769 1436 aa31.08■■■□□ 2.57
LCK-210ENST00000476457 ERICH3Q5RHP9 1530 aa31.07■■■□□ 2.56
LCK-210ENST00000476457 CEP170Q5SW79 1584 aa31.03■■■□□ 2.56
LCK-210ENST00000476457 ERCC6L2Q5T890 1561 aa31.01■■■□□ 2.56
LCK-210ENST00000476457 SHROOM2Q13796 1616 aa30.9■■■□□ 2.54
LCK-210ENST00000476457 JPH4Q96JJ6 628 aa30.78■■■□□ 2.52
LCK-210ENST00000476457 PRG4Q92954 1404 aaPredicted RBP30.77■■■□□ 2.52
LCK-210ENST00000476457 KIF27Q86VH2 1401 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms