RNA–Protein interactions for RNA: ENST00000476377.1

SPART-206, Transcript of spartin, humanhuman

TSL 2

Gene SPART, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPART-206ENST00000476377 NISCHQ9Y2I1 1504 aa16.32■□□□□ 0.2
SPART-206ENST00000476377 CHIC1Q5VXU3 224 aa16.19■□□□□ 0.18
SPART-206ENST00000476377 AEBP2Q6ZN18 517 aaPredicted RBP16.06■□□□□ 0.16
SPART-206ENST00000476377 CCDC180Q9P1Z9 1646 aa14.57□□□□□ -0.08
SPART-206ENST00000476377 ABCC9O60706 1549 aa14.45□□□□□ -0.1
SPART-206ENST00000476377 PHF23Q9BUL5 403 aaPredicted RBP14.27□□□□□ -0.13
SPART-206ENST00000476377 RB1CC1Q8TDY2 1594 aa13.8□□□□□ -0.2
SPART-206ENST00000476377 NACADO15069 1562 aa13.75□□□□□ -0.21
SPART-206ENST00000476377 DCAF8L2P0C7V8 631 aa13.64□□□□□ -0.23
SPART-206ENST00000476377 MYO15BQ96JP2 1530 aa13.62□□□□□ -0.23
SPART-206ENST00000476377 ZCCHC6Q5VYS8 1495 aaKnown RBP13.57□□□□□ -0.24
SPART-206ENST00000476377 SENP3Q9H4L4 574 aaPredicted RBP13.57□□□□□ -0.24
SPART-206ENST00000476377 DCAF1Q9Y4B6 1507 aa13.49□□□□□ -0.25
SPART-206ENST00000476377 UNC13AQ9UPW8 1703 aa13.47□□□□□ -0.25
SPART-206ENST00000476377 PABPN1Q86U42 306 aaKnown RBP eCLIP13.47□□□□□ -0.25
SPART-206ENST00000476377 DNAJC5BQ9UF47 199 aa13.46□□□□□ -0.25
SPART-206ENST00000476377 BICRAQ9NZM4 1560 aa13.43□□□□□ -0.26
SPART-206ENST00000476377 PLPPR3Q6T4P5 718 aa13.4□□□□□ -0.26
SPART-206ENST00000476377 SCRIBQ14160 1630 aa13.29□□□□□ -0.28
SPART-206ENST00000476377 SHROOM4Q9ULL8 1493 aa13.26□□□□□ -0.29
SPART-206ENST00000476377 EIF4G1Q04637 1599 aaKnown RBP13.07□□□□□ -0.32
SPART-206ENST00000476377 CC2D2AQ9P2K1 1620 aa13.06□□□□□ -0.32
SPART-206ENST00000476377 CECR2Q9BXF3 1484 aa13.01□□□□□ -0.33
SPART-206ENST00000476377 NCAPD3P42695 1498 aa12.71□□□□□ -0.38
SPART-206ENST00000476377 SMARCA4P51532 1647 aa12.7□□□□□ -0.38
SPART-206ENST00000476377 ATAD2BQ9ULI0 1458 aa12.69□□□□□ -0.38
SPART-206ENST00000476377 BAZ1AQ9NRL2 1556 aaPredicted RBP12.64□□□□□ -0.39
SPART-206ENST00000476377 SMARCA2P51531 1590 aa12.64□□□□□ -0.39
SPART-206ENST00000476377 HMGXB3Q12766 1538 aa12.62□□□□□ -0.39
SPART-206ENST00000476377 PEG3Q9GZU2 1588 aa12.59□□□□□ -0.39
SPART-206ENST00000476377 MROH2BQ7Z745 1585 aa12.58□□□□□ -0.4
SPART-206ENST00000476377 BAZ1BQ9UIG0 1483 aaKnown RBP12.55□□□□□ -0.4
SPART-206ENST00000476377 ADRA2BP18089 450 aa12.54□□□□□ -0.4
SPART-206ENST00000476377 FOXD1Q16676 465 aa12.52□□□□□ -0.41
SPART-206ENST00000476377 NESP48681 1621 aa12.46□□□□□ -0.41
SPART-206ENST00000476377 ERCC6Q03468 1493 aa12.45□□□□□ -0.42
SPART-206ENST00000476377 PPP6R1Q9UPN7 881 aa12.43□□□□□ -0.42
SPART-206ENST00000476377 WIZO95785 1651 aa12.42□□□□□ -0.42
SPART-206ENST00000476377 CUX2O14529 1486 aa12.4□□□□□ -0.42
SPART-206ENST00000476377 LAMC3Q9Y6N6 1575 aa12.38□□□□□ -0.43
SPART-206ENST00000476377 RSF1Q96T23 1441 aaPredicted RBP12.37□□□□□ -0.43
SPART-206ENST00000476377 THOC2Q8NI27 1593 aaKnown RBP12.32□□□□□ -0.44
SPART-206ENST00000476377 CADPSQ9ULU8 1353 aa12.31□□□□□ -0.44
SPART-206ENST00000476377 PDS5BQ9NTI5 1447 aa12.3□□□□□ -0.44
SPART-206ENST00000476377 TOP2AP11388 1531 aaKnown RBP12.28□□□□□ -0.44
SPART-206ENST00000476377 KIF21AQ7Z4S6 1674 aa12.28□□□□□ -0.44
SPART-206ENST00000476377 DNAJC5Q9H3Z4 198 aa12.24□□□□□ -0.45
SPART-206ENST00000476377 CFTRP13569 1480 aa12.21□□□□□ -0.45
SPART-206ENST00000476377 KCNA4P22459 653 aa12.21□□□□□ -0.45
SPART-206ENST00000476377 MRC2Q9UBG0 1479 aa12.21□□□□□ -0.46
SPART-206ENST00000476377 WDR62O43379 1518 aa12.18□□□□□ -0.46
SPART-206ENST00000476377 FANCD2Q9BXW9 1451 aa12.17□□□□□ -0.46
SPART-206ENST00000476377 CEP164Q9UPV0 1460 aa12.17□□□□□ -0.46
SPART-206ENST00000476377 CCDC88BA6NC98 1476 aa12.14□□□□□ -0.47
SPART-206ENST00000476377 URB2Q14146 1524 aaKnown RBP12.08□□□□□ -0.48
SPART-206ENST00000476377 EHMT2Q96KQ7 1210 aa12.08□□□□□ -0.48
SPART-206ENST00000476377 PRDM2Q13029 1718 aa12.06□□□□□ -0.48
SPART-206ENST00000476377 PIAS4Q8N2W9 510 aaPredicted RBP12.01□□□□□ -0.49
SPART-206ENST00000476377 TOPBP1Q92547 1522 aa11.96□□□□□ -0.49
SPART-206ENST00000476377 IFT140Q96RY7 1462 aa11.93□□□□□ -0.5
SPART-206ENST00000476377 DNMBPQ6XZF7 1577 aa11.92□□□□□ -0.5
SPART-206ENST00000476377 ABCC8Q09428 1581 aa11.92□□□□□ -0.5
SPART-206ENST00000476377 ZNF608Q9ULD9 1512 aaPredicted RBP11.91□□□□□ -0.5
SPART-206ENST00000476377 PPP4R3CPQ6ZMV5 832 aa11.88□□□□□ -0.51
SPART-206ENST00000476377 SUPT5HO00267 1087 aaKnown RBP11.86□□□□□ -0.51
SPART-206ENST00000476377 TARBP1Q13395 1621 aaKnown RBP11.86□□□□□ -0.51
SPART-206ENST00000476377 POLA1P09884 1462 aaPredicted RBP11.85□□□□□ -0.51
SPART-206ENST00000476377 EIF4G3O43432 1585 aaKnown RBP11.84□□□□□ -0.51
SPART-206ENST00000476377 CUX1P39880 1505 aa11.82□□□□□ -0.52
SPART-206ENST00000476377 OSCARQ8IYS5 282 aa11.82□□□□□ -0.52
SPART-206ENST00000476377 AQRO60306 1485 aaKnown RBP eCLIP11.81□□□□□ -0.52
SPART-206ENST00000476377 RAD54L2Q9Y4B4 1467 aa11.8□□□□□ -0.52
SPART-206ENST00000476377 FGD5Q6ZNL6 1462 aa11.79□□□□□ -0.52
SPART-206ENST00000476377 SOGA1O94964 1423 aa11.77□□□□□ -0.52
SPART-206ENST00000476377 SLC4A1APQ9BWU0 796 aaKnown RBP11.75□□□□□ -0.53
SPART-206ENST00000476377 NCBP3Q53F19 620 aaKnown RBP11.74□□□□□ -0.53
SPART-206ENST00000476377 TDRD9Q8NDG6 1382 aaKnown RBP11.74□□□□□ -0.53
SPART-206ENST00000476377 WDR97A6NE52 1622 aa11.73□□□□□ -0.53
SPART-206ENST00000476377 TRIM41Q8WV44 630 aa11.73□□□□□ -0.53
SPART-206ENST00000476377 CHD1O14646 1710 aa11.7□□□□□ -0.54
SPART-206ENST00000476377 SNAPC4Q5SXM2 1469 aa11.7□□□□□ -0.54
SPART-206ENST00000476377 RIMBP3CA6NJZ7 1639 aa11.68□□□□□ -0.54
SPART-206ENST00000476377 RIMBP3BA6NNM3 1639 aa11.68□□□□□ -0.54
SPART-206ENST00000476377 RIMBP3Q9UFD9 1639 aa11.68□□□□□ -0.54
SPART-206ENST00000476377 ARHGEF11O15085 1522 aa11.67□□□□□ -0.54
SPART-206ENST00000476377 ABCA10Q8WWZ4 1543 aa11.67□□□□□ -0.54
SPART-206ENST00000476377 GRIN2BQ13224 1484 aa11.67□□□□□ -0.54
SPART-206ENST00000476377 MAGI1Q96QZ7 1491 aaPredicted RBP11.67□□□□□ -0.54
SPART-206ENST00000476377 GAPVD1Q14C86 1478 aa11.65□□□□□ -0.54
SPART-206ENST00000476377 FBLN2P98095 1184 aa11.65□□□□□ -0.54
SPART-206ENST00000476377 WRNQ14191 1432 aaPredicted RBP eCLIP11.65□□□□□ -0.54
SPART-206ENST00000476377 SYNJ1O43426 1573 aa11.65□□□□□ -0.54
SPART-206ENST00000476377 TOP2BQ02880 1626 aa11.64□□□□□ -0.55
SPART-206ENST00000476377 ABCA5Q8WWZ7 1642 aa11.64□□□□□ -0.55
SPART-206ENST00000476377 BIVM-ERCC5R4GMW8 1640 aa11.64□□□□□ -0.55
SPART-206ENST00000476377 SYNJ2O15056 1496 aa11.63□□□□□ -0.55
SPART-206ENST00000476377 PBRM1Q86U86 1689 aa11.62□□□□□ -0.55
SPART-206ENST00000476377 CLASP1Q7Z460 1538 aa11.61□□□□□ -0.55
SPART-206ENST00000476377 CHMP7Q8WUX9 453 aaPredicted RBP11.6□□□□□ -0.55
SPART-206ENST00000476377 ARAP1Q96P48 1450 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms