RNA–Protein interactions for RNA: ENST00000476341.3

RN7SL497P-201, Transcript of RNA, 7SL, cytoplasmic 497, pseudogene, humanhuman

BASIC

Gene RN7SL497P, Length 301 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL497P-201ENST00000476341 NISCHQ9Y2I1 1504 aa28.84■■■□□ 2.21
RN7SL497P-201ENST00000476341 CCDC180Q9P1Z9 1646 aa25.74■■□□□ 1.71
RN7SL497P-201ENST00000476341 ABCC9O60706 1549 aa25.09■■□□□ 1.61
RN7SL497P-201ENST00000476341 RB1CC1Q8TDY2 1594 aa24.14■■□□□ 1.45
RN7SL497P-201ENST00000476341 NACADO15069 1562 aa24.08■■□□□ 1.45
RN7SL497P-201ENST00000476341 ZCCHC6Q5VYS8 1495 aaKnown RBP24.07■■□□□ 1.44
RN7SL497P-201ENST00000476341 DCAF8L2P0C7V8 631 aa23.97■■□□□ 1.43
RN7SL497P-201ENST00000476341 MYO15BQ96JP2 1530 aa23.89■■□□□ 1.42
RN7SL497P-201ENST00000476341 DCAF1Q9Y4B6 1507 aa23.83■■□□□ 1.41
RN7SL497P-201ENST00000476341 UNC13AQ9UPW8 1703 aa23.81■■□□□ 1.4
RN7SL497P-201ENST00000476341 SCRIBQ14160 1630 aa23.52■■□□□ 1.36
RN7SL497P-201ENST00000476341 BICRAQ9NZM4 1560 aa23.47■■□□□ 1.35
RN7SL497P-201ENST00000476341 PABPN1Q86U42 306 aaKnown RBP eCLIP23.36■■□□□ 1.33
RN7SL497P-201ENST00000476341 SHROOM4Q9ULL8 1493 aa23.11■■□□□ 1.29
RN7SL497P-201ENST00000476341 DNAJC5BQ9UF47 199 aa22.9■■□□□ 1.26
RN7SL497P-201ENST00000476341 EIF4G1Q04637 1599 aaKnown RBP22.82■■□□□ 1.24
RN7SL497P-201ENST00000476341 CC2D2AQ9P2K1 1620 aa22.74■■□□□ 1.23
RN7SL497P-201ENST00000476341 CECR2Q9BXF3 1484 aa22.5■■□□□ 1.19
RN7SL497P-201ENST00000476341 SMARCA4P51532 1647 aa22.46■■□□□ 1.19
RN7SL497P-201ENST00000476341 BAZ1AQ9NRL2 1556 aaPredicted RBP22.37■■□□□ 1.17
RN7SL497P-201ENST00000476341 MROH2BQ7Z745 1585 aa22.27■■□□□ 1.16
RN7SL497P-201ENST00000476341 SMARCA2P51531 1590 aa22.23■■□□□ 1.15
RN7SL497P-201ENST00000476341 ATAD2BQ9ULI0 1458 aa22.22■■□□□ 1.15
RN7SL497P-201ENST00000476341 PEG3Q9GZU2 1588 aa22.18■■□□□ 1.14
RN7SL497P-201ENST00000476341 HMGXB3Q12766 1538 aa22.16■■□□□ 1.14
RN7SL497P-201ENST00000476341 NCAPD3P42695 1498 aa22.15■■□□□ 1.14
RN7SL497P-201ENST00000476341 WIZO95785 1651 aa22.11■■□□□ 1.13
RN7SL497P-201ENST00000476341 BAZ1BQ9UIG0 1483 aaKnown RBP22.08■■□□□ 1.12
RN7SL497P-201ENST00000476341 RSF1Q96T23 1441 aaPredicted RBP21.95■■□□□ 1.1
RN7SL497P-201ENST00000476341 TOP2AP11388 1531 aaKnown RBP21.81■■□□□ 1.08
RN7SL497P-201ENST00000476341 NESP48681 1621 aa21.74■■□□□ 1.07
RN7SL497P-201ENST00000476341 LAMC3Q9Y6N6 1575 aa21.66■■□□□ 1.06
RN7SL497P-201ENST00000476341 KIF21AQ7Z4S6 1674 aa21.61■■□□□ 1.05
RN7SL497P-201ENST00000476341 ERCC6Q03468 1493 aa21.6■■□□□ 1.05
RN7SL497P-201ENST00000476341 PRDM2Q13029 1718 aa21.52■■□□□ 1.03
RN7SL497P-201ENST00000476341 CADPSQ9ULU8 1353 aa21.49■■□□□ 1.03
RN7SL497P-201ENST00000476341 CCDC88BA6NC98 1476 aa21.49■■□□□ 1.03
RN7SL497P-201ENST00000476341 THOC2Q8NI27 1593 aaKnown RBP21.48■■□□□ 1.03
RN7SL497P-201ENST00000476341 CFTRP13569 1480 aa21.43■■□□□ 1.02
RN7SL497P-201ENST00000476341 PDS5BQ9NTI5 1447 aa21.41■■□□□ 1.02
RN7SL497P-201ENST00000476341 SUPT5HO00267 1087 aaKnown RBP21.38■■□□□ 1.01
RN7SL497P-201ENST00000476341 FANCD2Q9BXW9 1451 aa21.33■■□□□ 1.01
RN7SL497P-201ENST00000476341 CUX2O14529 1486 aa21.32■■□□□ 1
RN7SL497P-201ENST00000476341 CEP164Q9UPV0 1460 aa21.32■■□□□ 1
RN7SL497P-201ENST00000476341 MRC2Q9UBG0 1479 aa21.28■■□□□ 1
RN7SL497P-201ENST00000476341 WDR62O43379 1518 aa21.24■□□□□ 0.99
RN7SL497P-201ENST00000476341 URB2Q14146 1524 aaKnown RBP21.16■□□□□ 0.98
RN7SL497P-201ENST00000476341 DNMBPQ6XZF7 1577 aa21.03■□□□□ 0.96
RN7SL497P-201ENST00000476341 TOPBP1Q92547 1522 aa21.02■□□□□ 0.96
RN7SL497P-201ENST00000476341 ABCC8Q09428 1581 aa20.92■□□□□ 0.94
RN7SL497P-201ENST00000476341 CUX1P39880 1505 aa20.9■□□□□ 0.94
RN7SL497P-201ENST00000476341 TARBP1Q13395 1621 aaKnown RBP20.85■□□□□ 0.93
RN7SL497P-201ENST00000476341 POLA1P09884 1462 aaPredicted RBP20.84■□□□□ 0.93
RN7SL497P-201ENST00000476341 IFT140Q96RY7 1462 aa20.83■□□□□ 0.93
RN7SL497P-201ENST00000476341 FGD5Q6ZNL6 1462 aa20.81■□□□□ 0.92
RN7SL497P-201ENST00000476341 EIF4G3O43432 1585 aaKnown RBP20.81■□□□□ 0.92
RN7SL497P-201ENST00000476341 ZNF608Q9ULD9 1512 aaPredicted RBP20.8■□□□□ 0.92
RN7SL497P-201ENST00000476341 BIVM-ERCC5R4GMW8 1640 aa20.78■□□□□ 0.92
RN7SL497P-201ENST00000476341 SYNJ1O43426 1573 aa20.78■□□□□ 0.92
RN7SL497P-201ENST00000476341 WDR97A6NE52 1622 aa20.78■□□□□ 0.92
RN7SL497P-201ENST00000476341 RAD54L2Q9Y4B4 1467 aa20.75■□□□□ 0.91
RN7SL497P-201ENST00000476341 TOP2BQ02880 1626 aa20.74■□□□□ 0.91
RN7SL497P-201ENST00000476341 WRNQ14191 1432 aaPredicted RBP eCLIP20.7■□□□□ 0.9
RN7SL497P-201ENST00000476341 SOGA1O94964 1423 aa20.67■□□□□ 0.9
RN7SL497P-201ENST00000476341 AQRO60306 1485 aaKnown RBP eCLIP20.63■□□□□ 0.89
RN7SL497P-201ENST00000476341 PBRM1Q86U86 1689 aa20.63■□□□□ 0.89
RN7SL497P-201ENST00000476341 CHD1O14646 1710 aa20.6■□□□□ 0.89
RN7SL497P-201ENST00000476341 ABCA5Q8WWZ7 1642 aa20.6■□□□□ 0.89
RN7SL497P-201ENST00000476341 TDRD9Q8NDG6 1382 aaKnown RBP20.58■□□□□ 0.88
RN7SL497P-201ENST00000476341 ABCA10Q8WWZ4 1543 aa20.57■□□□□ 0.88
RN7SL497P-201ENST00000476341 DNAJC5Q9H3Z4 198 aa20.53■□□□□ 0.88
RN7SL497P-201ENST00000476341 SNAPC4Q5SXM2 1469 aa20.5■□□□□ 0.87
RN7SL497P-201ENST00000476341 GAPVD1Q14C86 1478 aa20.48■□□□□ 0.87
RN7SL497P-201ENST00000476341 GRIN2BQ13224 1484 aa20.46■□□□□ 0.87
RN7SL497P-201ENST00000476341 MAGI1Q96QZ7 1491 aaPredicted RBP20.43■□□□□ 0.86
RN7SL497P-201ENST00000476341 ADAMTS12P58397 1594 aa20.39■□□□□ 0.85
RN7SL497P-201ENST00000476341 SYNJ2O15056 1496 aa20.35■□□□□ 0.85
RN7SL497P-201ENST00000476341 ERICH3Q5RHP9 1530 aa20.33■□□□□ 0.85
RN7SL497P-201ENST00000476341 FBLN2P98095 1184 aa20.32■□□□□ 0.84
RN7SL497P-201ENST00000476341 OSCARQ8IYS5 282 aa20.32■□□□□ 0.84
RN7SL497P-201ENST00000476341 CLASP1Q7Z460 1538 aa20.26■□□□□ 0.83
RN7SL497P-201ENST00000476341 GRIN2AQ12879 1464 aa20.24■□□□□ 0.83
RN7SL497P-201ENST00000476341 KIF27Q86VH2 1401 aa20.24■□□□□ 0.83
RN7SL497P-201ENST00000476341 RIMBP3CA6NJZ7 1639 aa20.24■□□□□ 0.83
RN7SL497P-201ENST00000476341 RIMBP3BA6NNM3 1639 aa20.24■□□□□ 0.83
RN7SL497P-201ENST00000476341 RIMBP3Q9UFD9 1639 aa20.24■□□□□ 0.83
RN7SL497P-201ENST00000476341 CUL7Q14999 1698 aa20.23■□□□□ 0.83
RN7SL497P-201ENST00000476341 CHMP7Q8WUX9 453 aaPredicted RBP20.23■□□□□ 0.83
RN7SL497P-201ENST00000476341 CEP170Q5SW79 1584 aa20.21■□□□□ 0.83
RN7SL497P-201ENST00000476341 FHAD1B1AJZ9 1412 aa20.21■□□□□ 0.83
RN7SL497P-201ENST00000476341 ARHGEF11O15085 1522 aa20.18■□□□□ 0.82
RN7SL497P-201ENST00000476341 RUSC2Q8N2Y8 1516 aa20.15■□□□□ 0.82
RN7SL497P-201ENST00000476341 TRIM41Q8WV44 630 aa20.14■□□□□ 0.81
RN7SL497P-201ENST00000476341 NUP160Q12769 1436 aa20.12■□□□□ 0.81
RN7SL497P-201ENST00000476341 IGF1RP08069 1367 aa20.1■□□□□ 0.81
RN7SL497P-201ENST00000476341 SHROOM2Q13796 1616 aa20.06■□□□□ 0.8
RN7SL497P-201ENST00000476341 ERCC6L2Q5T890 1561 aa20.03■□□□□ 0.8
RN7SL497P-201ENST00000476341 ARAP1Q96P48 1450 aa20.02■□□□□ 0.8
RN7SL497P-201ENST00000476341 CARMIL1Q5VZK9 1371 aa20■□□□□ 0.79
RN7SL497P-201ENST00000476341 CTTNBP2Q8WZ74 1663 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms