RNA–Protein interactions for RNA: ENST00000476086.6

NR1H3-219, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-219ENST00000476086 NISCHQ9Y2I1 1504 aa44.49■■■■■ 4.71
NR1H3-219ENST00000476086 CCDC180Q9P1Z9 1646 aa39.29■■■■□ 3.88
NR1H3-219ENST00000476086 ABCC9O60706 1549 aa37.54■■■■□ 3.6
NR1H3-219ENST00000476086 ZCCHC6Q5VYS8 1495 aaKnown RBP37.22■■■■□ 3.55
NR1H3-219ENST00000476086 DCAF1Q9Y4B6 1507 aa36.89■■■■□ 3.5
NR1H3-219ENST00000476086 DCAF8L2P0C7V8 631 aa36.83■■■■□ 3.49
NR1H3-219ENST00000476086 MYO15BQ96JP2 1530 aa36.75■■■■□ 3.47
NR1H3-219ENST00000476086 NACADO15069 1562 aa36.71■■■■□ 3.47
NR1H3-219ENST00000476086 RB1CC1Q8TDY2 1594 aa36.57■■■■□ 3.44
NR1H3-219ENST00000476086 SCRIBQ14160 1630 aa35.83■■■■□ 3.33
NR1H3-219ENST00000476086 UNC13AQ9UPW8 1703 aa35.75■■■■□ 3.31
NR1H3-219ENST00000476086 SHROOM4Q9ULL8 1493 aa35.58■■■■□ 3.29
NR1H3-219ENST00000476086 BICRAQ9NZM4 1560 aa35.34■■■■□ 3.25
NR1H3-219ENST00000476086 PABPN1Q86U42 306 aaKnown RBP eCLIP35.18■■■■□ 3.22
NR1H3-219ENST00000476086 CECR2Q9BXF3 1484 aa34.5■■■■□ 3.11
NR1H3-219ENST00000476086 BAZ1AQ9NRL2 1556 aaPredicted RBP34.48■■■■□ 3.11
NR1H3-219ENST00000476086 SMARCA4P51532 1647 aa34.37■■■■□ 3.09
NR1H3-219ENST00000476086 EIF4G1Q04637 1599 aaKnown RBP34.37■■■■□ 3.09
NR1H3-219ENST00000476086 MROH2BQ7Z745 1585 aa34.27■■■■□ 3.08
NR1H3-219ENST00000476086 RSF1Q96T23 1441 aaPredicted RBP34.16■■■■□ 3.06
NR1H3-219ENST00000476086 CC2D2AQ9P2K1 1620 aa34.04■■■■□ 3.04
NR1H3-219ENST00000476086 PEG3Q9GZU2 1588 aa34.02■■■■□ 3.04
NR1H3-219ENST00000476086 SMARCA2P51531 1590 aa34.02■■■■□ 3.04
NR1H3-219ENST00000476086 WIZO95785 1651 aa33.98■■■■□ 3.03
NR1H3-219ENST00000476086 ATAD2BQ9ULI0 1458 aa33.94■■■■□ 3.02
NR1H3-219ENST00000476086 SUPT5HO00267 1087 aaKnown RBP33.93■■■■□ 3.02
NR1H3-219ENST00000476086 NCAPD3P42695 1498 aa33.81■■■■□ 3
NR1H3-219ENST00000476086 HMGXB3Q12766 1538 aa33.76■■■■□ 3
NR1H3-219ENST00000476086 BAZ1BQ9UIG0 1483 aaKnown RBP33.75■■■□□ 2.99
NR1H3-219ENST00000476086 TOP2AP11388 1531 aaKnown RBP33.69■■■□□ 2.98
NR1H3-219ENST00000476086 DNAJC5BQ9UF47 199 aa33.61■■■□□ 2.97
NR1H3-219ENST00000476086 CCDC88BA6NC98 1476 aa33.24■■■□□ 2.91
NR1H3-219ENST00000476086 CADPSQ9ULU8 1353 aa32.87■■■□□ 2.85
NR1H3-219ENST00000476086 LAMC3Q9Y6N6 1575 aa32.86■■■□□ 2.85
NR1H3-219ENST00000476086 CFTRP13569 1480 aa32.85■■■□□ 2.85
NR1H3-219ENST00000476086 PRDM2Q13029 1718 aa32.8■■■□□ 2.84
NR1H3-219ENST00000476086 NESP48681 1621 aa32.7■■■□□ 2.83
NR1H3-219ENST00000476086 PDS5BQ9NTI5 1447 aa32.59■■■□□ 2.81
NR1H3-219ENST00000476086 FANCD2Q9BXW9 1451 aa32.5■■■□□ 2.79
NR1H3-219ENST00000476086 KIF21AQ7Z4S6 1674 aa32.43■■■□□ 2.78
NR1H3-219ENST00000476086 CEP164Q9UPV0 1460 aa32.42■■■□□ 2.78
NR1H3-219ENST00000476086 ERCC6Q03468 1493 aa32.36■■■□□ 2.77
NR1H3-219ENST00000476086 ABCC8Q09428 1581 aa32.27■■■□□ 2.76
NR1H3-219ENST00000476086 WRNQ14191 1432 aaPredicted RBP eCLIP32.24■■■□□ 2.75
NR1H3-219ENST00000476086 MRC2Q9UBG0 1479 aa32.18■■■□□ 2.74
NR1H3-219ENST00000476086 DNMBPQ6XZF7 1577 aa32.14■■■□□ 2.74
NR1H3-219ENST00000476086 CHIC1Q5VXU3 224 aa32.12■■■□□ 2.73
NR1H3-219ENST00000476086 BIVM-ERCC5R4GMW8 1640 aa32.11■■■□□ 2.73
NR1H3-219ENST00000476086 TOP2BQ02880 1626 aa32.11■■■□□ 2.73
NR1H3-219ENST00000476086 CUX1P39880 1505 aa32.1■■■□□ 2.73
NR1H3-219ENST00000476086 THOC2Q8NI27 1593 aaKnown RBP32.09■■■□□ 2.73
NR1H3-219ENST00000476086 URB2Q14146 1524 aaKnown RBP32.09■■■□□ 2.73
NR1H3-219ENST00000476086 SYNJ1O43426 1573 aa32.08■■■□□ 2.73
NR1H3-219ENST00000476086 TOPBP1Q92547 1522 aa32.07■■■□□ 2.72
NR1H3-219ENST00000476086 TRIM41Q8WV44 630 aa32.05■■■□□ 2.72
NR1H3-219ENST00000476086 WDR62O43379 1518 aa32.04■■■□□ 2.72
NR1H3-219ENST00000476086 FGD5Q6ZNL6 1462 aa31.89■■■□□ 2.7
NR1H3-219ENST00000476086 POLA1P09884 1462 aaPredicted RBP31.84■■■□□ 2.69
NR1H3-219ENST00000476086 SOGA1O94964 1423 aa31.75■■■□□ 2.67
NR1H3-219ENST00000476086 CUX2O14529 1486 aa31.72■■■□□ 2.67
NR1H3-219ENST00000476086 IFT140Q96RY7 1462 aa31.69■■■□□ 2.66
NR1H3-219ENST00000476086 TARBP1Q13395 1621 aaKnown RBP31.67■■■□□ 2.66
NR1H3-219ENST00000476086 RAD54L2Q9Y4B4 1467 aa31.65■■■□□ 2.66
NR1H3-219ENST00000476086 ABCA10Q8WWZ4 1543 aa31.64■■■□□ 2.66
NR1H3-219ENST00000476086 WDR97A6NE52 1622 aa31.64■■■□□ 2.65
NR1H3-219ENST00000476086 KIF27Q86VH2 1401 aa31.52■■■□□ 2.64
NR1H3-219ENST00000476086 EEA1Q15075 1411 aa31.5■■■□□ 2.63
NR1H3-219ENST00000476086 ABCA5Q8WWZ7 1642 aa31.45■■■□□ 2.62
NR1H3-219ENST00000476086 TDRD9Q8NDG6 1382 aaKnown RBP31.43■■■□□ 2.62
NR1H3-219ENST00000476086 GAPVD1Q14C86 1478 aa31.4■■■□□ 2.62
NR1H3-219ENST00000476086 ZNF608Q9ULD9 1512 aaPredicted RBP31.4■■■□□ 2.62
NR1H3-219ENST00000476086 EIF4G3O43432 1585 aaKnown RBP31.39■■■□□ 2.62
NR1H3-219ENST00000476086 RUSC2Q8N2Y8 1516 aa31.38■■■□□ 2.61
NR1H3-219ENST00000476086 AQRO60306 1485 aaKnown RBP eCLIP31.34■■■□□ 2.617e-8■■■■□ 25.8
NR1H3-219ENST00000476086 PBRM1Q86U86 1689 aa31.34■■■□□ 2.61
NR1H3-219ENST00000476086 FAM9AQ8IZU1 332 aaPredicted RBP31.31■■■□□ 2.6
NR1H3-219ENST00000476086 ERICH3Q5RHP9 1530 aa31.3■■■□□ 2.6
NR1H3-219ENST00000476086 GRIN2BQ13224 1484 aa31.29■■■□□ 2.6
NR1H3-219ENST00000476086 CSRNP3Q8WYN3 585 aa31.27■■■□□ 2.6
NR1H3-219ENST00000476086 IGF1RP08069 1367 aa31.23■■■□□ 2.59
NR1H3-219ENST00000476086 CUL7Q14999 1698 aa31.22■■■□□ 2.59
NR1H3-219ENST00000476086 MAGI1Q96QZ7 1491 aaPredicted RBP31.14■■■□□ 2.58
NR1H3-219ENST00000476086 SNAPC4Q5SXM2 1469 aa31.11■■■□□ 2.57
NR1H3-219ENST00000476086 CARMIL1Q5VZK9 1371 aa31.1■■■□□ 2.57
NR1H3-219ENST00000476086 KIF21BO75037 1637 aa31.09■■■□□ 2.57
NR1H3-219ENST00000476086 ADAMTS12P58397 1594 aa31.09■■■□□ 2.57
NR1H3-219ENST00000476086 PRXQ9BXM0 1461 aa31.08■■■□□ 2.57
NR1H3-219ENST00000476086 FHAD1B1AJZ9 1412 aa31.07■■■□□ 2.57
NR1H3-219ENST00000476086 RAPGEF2Q9Y4G8 1499 aa31.03■■■□□ 2.56
NR1H3-219ENST00000476086 SYNJ2O15056 1496 aa30.99■■■□□ 2.55
NR1H3-219ENST00000476086 GOLGA3Q08378 1498 aa30.96■■■□□ 2.55
NR1H3-219ENST00000476086 CHMP7Q8WUX9 453 aaPredicted RBP30.92■■■□□ 2.54
NR1H3-219ENST00000476086 GRIN2AQ12879 1464 aa30.88■■■□□ 2.53
NR1H3-219ENST00000476086 CHD1O14646 1710 aa30.87■■■□□ 2.53
NR1H3-219ENST00000476086 FBLN2P98095 1184 aa30.86■■■□□ 2.53
NR1H3-219ENST00000476086 EHMT2Q96KQ7 1210 aa30.81■■■□□ 2.52
NR1H3-219ENST00000476086 UBTFP17480 764 aaKnown RBP30.8■■■□□ 2.52
NR1H3-219ENST00000476086 LOC105371045A0A1W2PR82 267 aa30.78■■■□□ 2.52
NR1H3-219ENST00000476086 CTTNBP2Q8WZ74 1663 aa30.77■■■□□ 2.52
NR1H3-219ENST00000476086 TNIKQ9UKE5 1360 aa30.7■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms