RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 AEBP2Q6ZN18 517 aaPredicted RBP18.38■□□□□ 0.53
UBE4B-208ENST00000475795 NISCHQ9Y2I1 1504 aa18.16■□□□□ 0.5
UBE4B-208ENST00000475795 CHIC1Q5VXU3 224 aa17.89■□□□□ 0.45
UBE4B-208ENST00000475795 CCDC180Q9P1Z9 1646 aa16.35■□□□□ 0.21
UBE4B-208ENST00000475795 ABCC9O60706 1549 aa16.29■□□□□ 0.2
UBE4B-208ENST00000475795 PHF23Q9BUL5 403 aaPredicted RBP15.69■□□□□ 0.1
UBE4B-208ENST00000475795 SENP3Q9H4L4 574 aaPredicted RBP15.68■□□□□ 0.1
UBE4B-208ENST00000475795 RB1CC1Q8TDY2 1594 aa15.54■□□□□ 0.08
UBE4B-208ENST00000475795 NACADO15069 1562 aa15.44■□□□□ 0.06
UBE4B-208ENST00000475795 DNAJC5BQ9UF47 199 aa15.27■□□□□ 0.04
UBE4B-208ENST00000475795 DCAF8L2P0C7V8 631 aa15.25■□□□□ 0.03
UBE4B-208ENST00000475795 UNC13AQ9UPW8 1703 aa15.25■□□□□ 0.03
UBE4B-208ENST00000475795 MYO15BQ96JP2 1530 aa15.22■□□□□ 0.03
UBE4B-208ENST00000475795 PABPN1Q86U42 306 aaKnown RBP eCLIP15.13■□□□□ 0.01
UBE4B-208ENST00000475795 BICRAQ9NZM4 1560 aa15.09■□□□□ 0.01
UBE4B-208ENST00000475795 ZCCHC6Q5VYS8 1495 aaKnown RBP15.06■□□□□ 0
UBE4B-208ENST00000475795 DCAF1Q9Y4B6 1507 aa15.02■□□□□ -0
UBE4B-208ENST00000475795 SHROOM4Q9ULL8 1493 aa14.9□□□□□ -0.02
UBE4B-208ENST00000475795 SCRIBQ14160 1630 aa14.86□□□□□ -0.03
UBE4B-208ENST00000475795 CC2D2AQ9P2K1 1620 aa14.76□□□□□ -0.05
UBE4B-208ENST00000475795 EIF4G1Q04637 1599 aaKnown RBP14.72□□□□□ -0.05
UBE4B-208ENST00000475795 CECR2Q9BXF3 1484 aa14.69□□□□□ -0.06
UBE4B-208ENST00000475795 PLPPR3Q6T4P5 718 aa14.54□□□□□ -0.08
UBE4B-208ENST00000475795 FOXD1Q16676 465 aa14.53□□□□□ -0.08
UBE4B-208ENST00000475795 NCAPD3P42695 1498 aa14.23□□□□□ -0.13
UBE4B-208ENST00000475795 SMARCA4P51532 1647 aa14.19□□□□□ -0.14
UBE4B-208ENST00000475795 ATAD2BQ9ULI0 1458 aa14.18□□□□□ -0.14
UBE4B-208ENST00000475795 SMARCA2P51531 1590 aa14.16□□□□□ -0.14
UBE4B-208ENST00000475795 HMGXB3Q12766 1538 aa14.15□□□□□ -0.14
UBE4B-208ENST00000475795 BAZ1AQ9NRL2 1556 aaPredicted RBP14.1□□□□□ -0.15
UBE4B-208ENST00000475795 CUX2O14529 1486 aa14.08□□□□□ -0.16
UBE4B-208ENST00000475795 ERCC6Q03468 1493 aa14.07□□□□□ -0.16
UBE4B-208ENST00000475795 PEG3Q9GZU2 1588 aa14.06□□□□□ -0.16
UBE4B-208ENST00000475795 DNAJC5Q9H3Z4 198 aa14.04□□□□□ -0.16
UBE4B-208ENST00000475795 BAZ1BQ9UIG0 1483 aaKnown RBP14.04□□□□□ -0.16
UBE4B-208ENST00000475795 NESP48681 1621 aa14□□□□□ -0.17
UBE4B-208ENST00000475795 MROH2BQ7Z745 1585 aa13.98□□□□□ -0.17
UBE4B-208ENST00000475795 ADRA2BP18089 450 aa13.95□□□□□ -0.18
UBE4B-208ENST00000475795 LAMC3Q9Y6N6 1575 aa13.93□□□□□ -0.18
UBE4B-208ENST00000475795 THOC2Q8NI27 1593 aaKnown RBP13.91□□□□□ -0.18
UBE4B-208ENST00000475795 PPP6R1Q9UPN7 881 aa13.9□□□□□ -0.18
UBE4B-208ENST00000475795 KIF21AQ7Z4S6 1674 aa13.87□□□□□ -0.19
UBE4B-208ENST00000475795 WIZO95785 1651 aa13.84□□□□□ -0.19
UBE4B-208ENST00000475795 PDS5BQ9NTI5 1447 aa13.82□□□□□ -0.2
UBE4B-208ENST00000475795 PIAS4Q8N2W9 510 aaPredicted RBP13.78□□□□□ -0.2
UBE4B-208ENST00000475795 CADPSQ9ULU8 1353 aa13.78□□□□□ -0.2
UBE4B-208ENST00000475795 MRC2Q9UBG0 1479 aa13.72□□□□□ -0.21
UBE4B-208ENST00000475795 WDR62O43379 1518 aa13.7□□□□□ -0.22
UBE4B-208ENST00000475795 RSF1Q96T23 1441 aaPredicted RBP13.68□□□□□ -0.22
UBE4B-208ENST00000475795 TOP2AP11388 1531 aaKnown RBP13.66□□□□□ -0.22
UBE4B-208ENST00000475795 CEP164Q9UPV0 1460 aa13.66□□□□□ -0.22
UBE4B-208ENST00000475795 CFTRP13569 1480 aa13.64□□□□□ -0.23
UBE4B-208ENST00000475795 FANCD2Q9BXW9 1451 aa13.63□□□□□ -0.23
UBE4B-208ENST00000475795 PRDM2Q13029 1718 aa13.59□□□□□ -0.23
UBE4B-208ENST00000475795 URB2Q14146 1524 aaKnown RBP13.53□□□□□ -0.24
UBE4B-208ENST00000475795 CCDC88BA6NC98 1476 aa13.48□□□□□ -0.25
UBE4B-208ENST00000475795 MSH5O43196 834 aa13.47□□□□□ -0.25
UBE4B-208ENST00000475795 TRIM41Q8WV44 630 aa13.4□□□□□ -0.26
UBE4B-208ENST00000475795 TOPBP1Q92547 1522 aa13.39□□□□□ -0.27
UBE4B-208ENST00000475795 IFT140Q96RY7 1462 aa13.38□□□□□ -0.27
UBE4B-208ENST00000475795 OSCARQ8IYS5 282 aa13.38□□□□□ -0.27
UBE4B-208ENST00000475795 ABCC8Q09428 1581 aa13.36□□□□□ -0.27
UBE4B-208ENST00000475795 ZNF608Q9ULD9 1512 aaPredicted RBP13.35□□□□□ -0.27
UBE4B-208ENST00000475795 DNMBPQ6XZF7 1577 aa13.35□□□□□ -0.27
UBE4B-208ENST00000475795 EIF4G3O43432 1585 aaKnown RBP13.31□□□□□ -0.28
UBE4B-208ENST00000475795 TARBP1Q13395 1621 aaKnown RBP13.28□□□□□ -0.28
UBE4B-208ENST00000475795 RIMBP3CA6NJZ7 1639 aa13.27□□□□□ -0.29
UBE4B-208ENST00000475795 RIMBP3BA6NNM3 1639 aa13.27□□□□□ -0.29
UBE4B-208ENST00000475795 RIMBP3Q9UFD9 1639 aa13.27□□□□□ -0.29
UBE4B-208ENST00000475795 POLA1P09884 1462 aaPredicted RBP13.24□□□□□ -0.29
UBE4B-208ENST00000475795 CHD1O14646 1710 aa13.24□□□□□ -0.29
UBE4B-208ENST00000475795 AQRO60306 1485 aaKnown RBP eCLIP13.22□□□□□ -0.294e-7■□□□□ 9.9
UBE4B-208ENST00000475795 ARHGEF11O15085 1522 aa13.21□□□□□ -0.29
UBE4B-208ENST00000475795 RAD54L2Q9Y4B4 1467 aa13.18□□□□□ -0.3
UBE4B-208ENST00000475795 WDR97A6NE52 1622 aa13.17□□□□□ -0.3
UBE4B-208ENST00000475795 FGD5Q6ZNL6 1462 aa13.16□□□□□ -0.3
UBE4B-208ENST00000475795 SOGA1O94964 1423 aa13.15□□□□□ -0.3
UBE4B-208ENST00000475795 CUX1P39880 1505 aa13.15□□□□□ -0.3
UBE4B-208ENST00000475795 TDRD9Q8NDG6 1382 aaKnown RBP13.12□□□□□ -0.31
UBE4B-208ENST00000475795 SNAPC4Q5SXM2 1469 aa13.1□□□□□ -0.31
UBE4B-208ENST00000475795 FBLN2P98095 1184 aa13.1□□□□□ -0.31
UBE4B-208ENST00000475795 ARAP1Q96P48 1450 aa13.08□□□□□ -0.32
UBE4B-208ENST00000475795 MAGI1Q96QZ7 1491 aaPredicted RBP13.08□□□□□ -0.32
UBE4B-208ENST00000475795 PBRM1Q86U86 1689 aa13.07□□□□□ -0.32
UBE4B-208ENST00000475795 GRIN2BQ13224 1484 aa13.06□□□□□ -0.32
UBE4B-208ENST00000475795 CYB5RLQ6IPT4 315 aa13.06□□□□□ -0.32
UBE4B-208ENST00000475795 CLASP1Q7Z460 1538 aa13.06□□□□□ -0.32
UBE4B-208ENST00000475795 SYNJ1O43426 1573 aa13.05□□□□□ -0.32
UBE4B-208ENST00000475795 SYNJ2O15056 1496 aa13.03□□□□□ -0.32
UBE4B-208ENST00000475795 GAPVD1Q14C86 1478 aa13.02□□□□□ -0.33
UBE4B-208ENST00000475795 ABCA5Q8WWZ7 1642 aa13.02□□□□□ -0.33
UBE4B-208ENST00000475795 SUPT5HO00267 1087 aaKnown RBP13.01□□□□□ -0.33
UBE4B-208ENST00000475795 CHMP7Q8WUX9 453 aaPredicted RBP13.01□□□□□ -0.33
UBE4B-208ENST00000475795 ABCA10Q8WWZ4 1543 aa13.01□□□□□ -0.33
UBE4B-208ENST00000475795 BIVM-ERCC5R4GMW8 1640 aa12.97□□□□□ -0.33
UBE4B-208ENST00000475795 TOP2BQ02880 1626 aa12.95□□□□□ -0.34
UBE4B-208ENST00000475795 WRNQ14191 1432 aaPredicted RBP eCLIP12.94□□□□□ -0.34
UBE4B-208ENST00000475795 ADAMTS12P58397 1594 aa12.92□□□□□ -0.34
UBE4B-208ENST00000475795 TRHP20396 242 aaPredicted RBP12.91□□□□□ -0.34
UBE4B-208ENST00000475795 GRIN2AQ12879 1464 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms