RNA–Protein interactions for RNA: ENST00000475610.1

GNAS-231, Transcript of GNAS complex locus, humanhuman

TSL 1 (best)

Gene GNAS, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNAS-231ENST00000475610 NISCHQ9Y2I1 1504 aa25.96■■□□□ 1.75
GNAS-231ENST00000475610 ABCC9O60706 1549 aa23.49■■□□□ 1.35
GNAS-231ENST00000475610 CCDC180Q9P1Z9 1646 aa23.34■■□□□ 1.33
GNAS-231ENST00000475610 RB1CC1Q8TDY2 1594 aa22.33■■□□□ 1.17
GNAS-231ENST00000475610 DNAJC5BQ9UF47 199 aa22.2■■□□□ 1.14
GNAS-231ENST00000475610 NACADO15069 1562 aa22.17■■□□□ 1.14
GNAS-231ENST00000475610 DCAF8L2P0C7V8 631 aa21.91■■□□□ 1.1
GNAS-231ENST00000475610 MYO15BQ96JP2 1530 aa21.9■■□□□ 1.1
GNAS-231ENST00000475610 PABPN1Q86U42 306 aaKnown RBP eCLIP21.84■■□□□ 1.091e-59■■□□□ 11.4
GNAS-231ENST00000475610 BICRAQ9NZM4 1560 aa21.64■■□□□ 1.05
GNAS-231ENST00000475610 UNC13AQ9UPW8 1703 aa21.62■■□□□ 1.05
GNAS-231ENST00000475610 SHROOM4Q9ULL8 1493 aa21.52■■□□□ 1.03
GNAS-231ENST00000475610 DCAF1Q9Y4B6 1507 aa21.51■■□□□ 1.03
GNAS-231ENST00000475610 ZCCHC6Q5VYS8 1495 aaKnown RBP21.49■■□□□ 1.03
GNAS-231ENST00000475610 CECR2Q9BXF3 1484 aa21.23■□□□□ 0.99
GNAS-231ENST00000475610 CC2D2AQ9P2K1 1620 aa21.2■□□□□ 0.98
GNAS-231ENST00000475610 SCRIBQ14160 1630 aa21.18■□□□□ 0.98
GNAS-231ENST00000475610 EIF4G1Q04637 1599 aaKnown RBP21.14■□□□□ 0.98
GNAS-231ENST00000475610 DNAJC5Q9H3Z4 198 aa20.61■□□□□ 0.89
GNAS-231ENST00000475610 NCAPD3P42695 1498 aa20.5■□□□□ 0.87
GNAS-231ENST00000475610 CUX2O14529 1486 aa20.43■□□□□ 0.86
GNAS-231ENST00000475610 ATAD2BQ9ULI0 1458 aa20.37■□□□□ 0.85
GNAS-231ENST00000475610 ERCC6Q03468 1493 aa20.34■□□□□ 0.85
GNAS-231ENST00000475610 SMARCA2P51531 1590 aa20.31■□□□□ 0.84
GNAS-231ENST00000475610 HMGXB3Q12766 1538 aa20.31■□□□□ 0.84
GNAS-231ENST00000475610 SMARCA4P51532 1647 aa20.24■□□□□ 0.83
GNAS-231ENST00000475610 BAZ1AQ9NRL2 1556 aaPredicted RBP20.17■□□□□ 0.82
GNAS-231ENST00000475610 BAZ1BQ9UIG0 1483 aaKnown RBP20.15■□□□□ 0.82
GNAS-231ENST00000475610 PEG3Q9GZU2 1588 aa20.12■□□□□ 0.81
GNAS-231ENST00000475610 NESP48681 1621 aa20.1■□□□□ 0.81
GNAS-231ENST00000475610 LAMC3Q9Y6N6 1575 aa20.02■□□□□ 0.8
GNAS-231ENST00000475610 PDS5BQ9NTI5 1447 aa19.96■□□□□ 0.79
GNAS-231ENST00000475610 MROH2BQ7Z745 1585 aa19.95■□□□□ 0.78
GNAS-231ENST00000475610 THOC2Q8NI27 1593 aaKnown RBP19.95■□□□□ 0.78
GNAS-231ENST00000475610 CADPSQ9ULU8 1353 aa19.86■□□□□ 0.77
GNAS-231ENST00000475610 KIF21AQ7Z4S6 1674 aa19.76■□□□□ 0.75
GNAS-231ENST00000475610 MRC2Q9UBG0 1479 aa19.76■□□□□ 0.75
GNAS-231ENST00000475610 WDR62O43379 1518 aa19.7■□□□□ 0.74
GNAS-231ENST00000475610 CEP164Q9UPV0 1460 aa19.64■□□□□ 0.73
GNAS-231ENST00000475610 WIZO95785 1651 aa19.62■□□□□ 0.73
GNAS-231ENST00000475610 FANCD2Q9BXW9 1451 aa19.6■□□□□ 0.73
GNAS-231ENST00000475610 CFTRP13569 1480 aa19.59■□□□□ 0.73
GNAS-231ENST00000475610 RSF1Q96T23 1441 aaPredicted RBP19.53■□□□□ 0.72
GNAS-231ENST00000475610 TRIM41Q8WV44 630 aa19.53■□□□□ 0.72
GNAS-231ENST00000475610 TOP2AP11388 1531 aaKnown RBP19.48■□□□□ 0.71
GNAS-231ENST00000475610 OSCARQ8IYS5 282 aa19.46■□□□□ 0.71
GNAS-231ENST00000475610 URB2Q14146 1524 aaKnown RBP19.41■□□□□ 0.7
GNAS-231ENST00000475610 IFT140Q96RY7 1462 aa19.28■□□□□ 0.68
GNAS-231ENST00000475610 CCDC88BA6NC98 1476 aa19.25■□□□□ 0.67
GNAS-231ENST00000475610 ABCC8Q09428 1581 aa19.22■□□□□ 0.67
GNAS-231ENST00000475610 PRDM2Q13029 1718 aa19.2■□□□□ 0.66
GNAS-231ENST00000475610 TOPBP1Q92547 1522 aa19.19■□□□□ 0.66
GNAS-231ENST00000475610 ZNF608Q9ULD9 1512 aaPredicted RBP19.18■□□□□ 0.66
GNAS-231ENST00000475610 RIMBP3CA6NJZ7 1639 aa19.1■□□□□ 0.65
GNAS-231ENST00000475610 RIMBP3BA6NNM3 1639 aa19.1■□□□□ 0.65
GNAS-231ENST00000475610 RIMBP3Q9UFD9 1639 aa19.1■□□□□ 0.65
GNAS-231ENST00000475610 DNMBPQ6XZF7 1577 aa19.1■□□□□ 0.65
GNAS-231ENST00000475610 ARHGEF11O15085 1522 aa19.08■□□□□ 0.64
GNAS-231ENST00000475610 EIF4G3O43432 1585 aaKnown RBP19.05■□□□□ 0.64
GNAS-231ENST00000475610 AQRO60306 1485 aaKnown RBP eCLIP19■□□□□ 0.634e-8■■■■■ 31.9
GNAS-231ENST00000475610 TARBP1Q13395 1621 aaKnown RBP18.99■□□□□ 0.63
GNAS-231ENST00000475610 POLA1P09884 1462 aaPredicted RBP18.98■□□□□ 0.63
GNAS-231ENST00000475610 CYB5RLQ6IPT4 315 aa18.95■□□□□ 0.62
GNAS-231ENST00000475610 SOGA1O94964 1423 aa18.91■□□□□ 0.62
GNAS-231ENST00000475610 FBLN2P98095 1184 aa18.91■□□□□ 0.62
GNAS-231ENST00000475610 WDR97A6NE52 1622 aa18.89■□□□□ 0.62
GNAS-231ENST00000475610 ARAP1Q96P48 1450 aa18.89■□□□□ 0.61
GNAS-231ENST00000475610 TDRD9Q8NDG6 1382 aaKnown RBP18.87■□□□□ 0.61
GNAS-231ENST00000475610 RAD54L2Q9Y4B4 1467 aa18.87■□□□□ 0.61
GNAS-231ENST00000475610 CHD1O14646 1710 aa18.86■□□□□ 0.61
GNAS-231ENST00000475610 SNAPC4Q5SXM2 1469 aa18.82■□□□□ 0.6
GNAS-231ENST00000475610 FGD5Q6ZNL6 1462 aa18.82■□□□□ 0.6
GNAS-231ENST00000475610 MAGI1Q96QZ7 1491 aaPredicted RBP18.82■□□□□ 0.6
GNAS-231ENST00000475610 TRHP20396 242 aaPredicted RBP18.8■□□□□ 0.6
GNAS-231ENST00000475610 CHMP7Q8WUX9 453 aaPredicted RBP18.8■□□□□ 0.6
GNAS-231ENST00000475610 GRIN2BQ13224 1484 aa18.78■□□□□ 0.6
GNAS-231ENST00000475610 CLASP1Q7Z460 1538 aa18.77■□□□□ 0.6
GNAS-231ENST00000475610 CUX1P39880 1505 aa18.76■□□□□ 0.59
GNAS-231ENST00000475610 SYNJ1O43426 1573 aa18.76■□□□□ 0.59
GNAS-231ENST00000475610 SYNJ2O15056 1496 aa18.75■□□□□ 0.59
GNAS-231ENST00000475610 AEBP2Q6ZN18 517 aaPredicted RBP18.72■□□□□ 0.59
GNAS-231ENST00000475610 GAPVD1Q14C86 1478 aa18.67■□□□□ 0.58
GNAS-231ENST00000475610 ABCA10Q8WWZ4 1543 aa18.65■□□□□ 0.58
GNAS-231ENST00000475610 WRNQ14191 1432 aaPredicted RBP eCLIP18.57■□□□□ 0.56
GNAS-231ENST00000475610 ABCA5Q8WWZ7 1642 aa18.56■□□□□ 0.56
GNAS-231ENST00000475610 PBRM1Q86U86 1689 aa18.54■□□□□ 0.56
GNAS-231ENST00000475610 GRIN2AQ12879 1464 aa18.52■□□□□ 0.56
GNAS-231ENST00000475610 NUP160Q12769 1436 aa18.5■□□□□ 0.55
GNAS-231ENST00000475610 FHAD1B1AJZ9 1412 aa18.47■□□□□ 0.55
GNAS-231ENST00000475610 ADAMTS12P58397 1594 aa18.45■□□□□ 0.54
GNAS-231ENST00000475610 SUPT5HO00267 1087 aaKnown RBP18.44■□□□□ 0.54
GNAS-231ENST00000475610 TOP2BQ02880 1626 aa18.42■□□□□ 0.54
GNAS-231ENST00000475610 ERICH3Q5RHP9 1530 aa18.41■□□□□ 0.54
GNAS-231ENST00000475610 CEP170Q5SW79 1584 aa18.41■□□□□ 0.54
GNAS-231ENST00000475610 BIVM-ERCC5R4GMW8 1640 aa18.39■□□□□ 0.53
GNAS-231ENST00000475610 ERCC6L2Q5T890 1561 aa18.38■□□□□ 0.53
GNAS-231ENST00000475610 SHROOM2Q13796 1616 aa18.37■□□□□ 0.53
GNAS-231ENST00000475610 PRG4Q92954 1404 aaPredicted RBP18.31■□□□□ 0.52
GNAS-231ENST00000475610 JPH4Q96JJ6 628 aa18.3■□□□□ 0.52
GNAS-231ENST00000475610 NPM1P06748 294 aaKnown RBP eCLIP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms