RNA–Protein interactions for RNA: ENST00000475581.5

AMPH-209, Transcript of amphiphysin, humanhuman

TSL 4

Gene AMPH, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMPH-209ENST00000475581 NISCHQ9Y2I1 1504 aa28.21■■■□□ 2.11
AMPH-209ENST00000475581 CCDC180Q9P1Z9 1646 aa25.05■■□□□ 1.6
AMPH-209ENST00000475581 ABCC9O60706 1549 aa25.04■■□□□ 1.6
AMPH-209ENST00000475581 AEBP2Q6ZN18 517 aaPredicted RBP24.84■■□□□ 1.57
AMPH-209ENST00000475581 DCAF8L2P0C7V8 631 aa23.96■■□□□ 1.43
AMPH-209ENST00000475581 RB1CC1Q8TDY2 1594 aa23.85■■□□□ 1.41
AMPH-209ENST00000475581 NACADO15069 1562 aa23.75■■□□□ 1.39
AMPH-209ENST00000475581 MYO15BQ96JP2 1530 aa23.49■■□□□ 1.35
AMPH-209ENST00000475581 PABPN1Q86U42 306 aaKnown RBP eCLIP23.47■■□□□ 1.35
AMPH-209ENST00000475581 DNAJC5BQ9UF47 199 aa23.39■■□□□ 1.33
AMPH-209ENST00000475581 ZCCHC6Q5VYS8 1495 aaKnown RBP23.38■■□□□ 1.33
AMPH-209ENST00000475581 DCAF1Q9Y4B6 1507 aa23.27■■□□□ 1.32
AMPH-209ENST00000475581 CHIC1Q5VXU3 224 aa23.25■■□□□ 1.31
AMPH-209ENST00000475581 UNC13AQ9UPW8 1703 aa23.14■■□□□ 1.3
AMPH-209ENST00000475581 BICRAQ9NZM4 1560 aa23.12■■□□□ 1.29
AMPH-209ENST00000475581 SCRIBQ14160 1630 aa22.94■■□□□ 1.26
AMPH-209ENST00000475581 SHROOM4Q9ULL8 1493 aa22.83■■□□□ 1.25
AMPH-209ENST00000475581 EIF4G1Q04637 1599 aaKnown RBP22.55■■□□□ 1.2
AMPH-209ENST00000475581 CC2D2AQ9P2K1 1620 aa22.54■■□□□ 1.2
AMPH-209ENST00000475581 CECR2Q9BXF3 1484 aa22.53■■□□□ 1.2
AMPH-209ENST00000475581 NCAPD3P42695 1498 aa22■■□□□ 1.11
AMPH-209ENST00000475581 ATAD2BQ9ULI0 1458 aa21.95■■□□□ 1.1
AMPH-209ENST00000475581 SMARCA4P51532 1647 aa21.88■■□□□ 1.09
AMPH-209ENST00000475581 SMARCA2P51531 1590 aa21.85■■□□□ 1.09
AMPH-209ENST00000475581 BAZ1AQ9NRL2 1556 aaPredicted RBP21.85■■□□□ 1.09
AMPH-209ENST00000475581 HMGXB3Q12766 1538 aa21.75■■□□□ 1.07
AMPH-209ENST00000475581 MROH2BQ7Z745 1585 aa21.74■■□□□ 1.07
AMPH-209ENST00000475581 BAZ1BQ9UIG0 1483 aaKnown RBP21.73■■□□□ 1.07
AMPH-209ENST00000475581 PEG3Q9GZU2 1588 aa21.66■■□□□ 1.06
AMPH-209ENST00000475581 ERCC6Q03468 1493 aa21.61■■□□□ 1.05
AMPH-209ENST00000475581 NESP48681 1621 aa21.55■■□□□ 1.04
AMPH-209ENST00000475581 CUX2O14529 1486 aa21.44■■□□□ 1.02
AMPH-209ENST00000475581 WIZO95785 1651 aa21.44■■□□□ 1.02
AMPH-209ENST00000475581 RSF1Q96T23 1441 aaPredicted RBP21.43■■□□□ 1.02
AMPH-209ENST00000475581 CADPSQ9ULU8 1353 aa21.38■■□□□ 1.01
AMPH-209ENST00000475581 LAMC3Q9Y6N6 1575 aa21.37■■□□□ 1.01
AMPH-209ENST00000475581 SENP3Q9H4L4 574 aaPredicted RBP21.36■■□□□ 1.01
AMPH-209ENST00000475581 PDS5BQ9NTI5 1447 aa21.36■■□□□ 1.01
AMPH-209ENST00000475581 DNAJC5Q9H3Z4 198 aa21.32■■□□□ 1
AMPH-209ENST00000475581 TOP2AP11388 1531 aaKnown RBP21.19■□□□□ 0.98
AMPH-209ENST00000475581 THOC2Q8NI27 1593 aaKnown RBP21.15■□□□□ 0.98
AMPH-209ENST00000475581 KIF21AQ7Z4S6 1674 aa21.13■□□□□ 0.97
AMPH-209ENST00000475581 CFTRP13569 1480 aa21.13■□□□□ 0.97
AMPH-209ENST00000475581 MRC2Q9UBG0 1479 aa21.1■□□□□ 0.97
AMPH-209ENST00000475581 FANCD2Q9BXW9 1451 aa21.08■□□□□ 0.97
AMPH-209ENST00000475581 CEP164Q9UPV0 1460 aa21.06■□□□□ 0.96
AMPH-209ENST00000475581 CCDC88BA6NC98 1476 aa21.04■□□□□ 0.96
AMPH-209ENST00000475581 WDR62O43379 1518 aa20.99■□□□□ 0.95
AMPH-209ENST00000475581 PHF23Q9BUL5 403 aaPredicted RBP20.96■□□□□ 0.95
AMPH-209ENST00000475581 URB2Q14146 1524 aaKnown RBP20.87■□□□□ 0.93
AMPH-209ENST00000475581 SUPT5HO00267 1087 aaKnown RBP20.79■□□□□ 0.92
AMPH-209ENST00000475581 TOPBP1Q92547 1522 aa20.68■□□□□ 0.9
AMPH-209ENST00000475581 ABCC8Q09428 1581 aa20.68■□□□□ 0.9
AMPH-209ENST00000475581 PRDM2Q13029 1718 aa20.68■□□□□ 0.9
AMPH-209ENST00000475581 OSCARQ8IYS5 282 aa20.67■□□□□ 0.9
AMPH-209ENST00000475581 IFT140Q96RY7 1462 aa20.65■□□□□ 0.9
AMPH-209ENST00000475581 ZNF608Q9ULD9 1512 aaPredicted RBP20.6■□□□□ 0.89
AMPH-209ENST00000475581 DNMBPQ6XZF7 1577 aa20.59■□□□□ 0.89
AMPH-209ENST00000475581 TRIM41Q8WV44 630 aa20.51■□□□□ 0.87
AMPH-209ENST00000475581 AQRO60306 1485 aaKnown RBP eCLIP20.5■□□□□ 0.87
AMPH-209ENST00000475581 SOGA1O94964 1423 aa20.49■□□□□ 0.87
AMPH-209ENST00000475581 POLA1P09884 1462 aaPredicted RBP20.49■□□□□ 0.87
AMPH-209ENST00000475581 RAD54L2Q9Y4B4 1467 aa20.46■□□□□ 0.87
AMPH-209ENST00000475581 TDRD9Q8NDG6 1382 aaKnown RBP20.44■□□□□ 0.86
AMPH-209ENST00000475581 FBLN2P98095 1184 aa20.42■□□□□ 0.86
AMPH-209ENST00000475581 TARBP1Q13395 1621 aaKnown RBP20.42■□□□□ 0.86
AMPH-209ENST00000475581 CUX1P39880 1505 aa20.4■□□□□ 0.86
AMPH-209ENST00000475581 FGD5Q6ZNL6 1462 aa20.4■□□□□ 0.86
AMPH-209ENST00000475581 EIF4G3O43432 1585 aaKnown RBP20.38■□□□□ 0.85
AMPH-209ENST00000475581 CHMP7Q8WUX9 453 aaPredicted RBP20.29■□□□□ 0.84
AMPH-209ENST00000475581 GRIN2BQ13224 1484 aa20.23■□□□□ 0.83
AMPH-209ENST00000475581 SNAPC4Q5SXM2 1469 aa20.23■□□□□ 0.83
AMPH-209ENST00000475581 WRNQ14191 1432 aaPredicted RBP eCLIP20.21■□□□□ 0.83
AMPH-209ENST00000475581 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
AMPH-209ENST00000475581 GAPVD1Q14C86 1478 aa20.19■□□□□ 0.82
AMPH-209ENST00000475581 CYB5RLQ6IPT4 315 aa20.18■□□□□ 0.82
AMPH-209ENST00000475581 MAGI1Q96QZ7 1491 aaPredicted RBP20.18■□□□□ 0.82
AMPH-209ENST00000475581 ABCA10Q8WWZ4 1543 aa20.17■□□□□ 0.82
AMPH-209ENST00000475581 ARHGEF11O15085 1522 aa20.16■□□□□ 0.82
AMPH-209ENST00000475581 RIMBP3CA6NJZ7 1639 aa20.16■□□□□ 0.82
AMPH-209ENST00000475581 RIMBP3BA6NNM3 1639 aa20.16■□□□□ 0.82
AMPH-209ENST00000475581 RIMBP3Q9UFD9 1639 aa20.16■□□□□ 0.82
AMPH-209ENST00000475581 CHD1O14646 1710 aa20.14■□□□□ 0.81
AMPH-209ENST00000475581 SYNJ2O15056 1496 aa20.12■□□□□ 0.81
AMPH-209ENST00000475581 TOP2BQ02880 1626 aa20.09■□□□□ 0.81
AMPH-209ENST00000475581 SYNJ1O43426 1573 aa20.08■□□□□ 0.8
AMPH-209ENST00000475581 BIVM-ERCC5R4GMW8 1640 aa20.04■□□□□ 0.8
AMPH-209ENST00000475581 ABCA5Q8WWZ7 1642 aa20.03■□□□□ 0.8
AMPH-209ENST00000475581 ARAP1Q96P48 1450 aa19.99■□□□□ 0.79
AMPH-209ENST00000475581 CLASP1Q7Z460 1538 aa19.99■□□□□ 0.79
AMPH-209ENST00000475581 PBRM1Q86U86 1689 aa19.98■□□□□ 0.79
AMPH-209ENST00000475581 FOXD1Q16676 465 aa19.96■□□□□ 0.79
AMPH-209ENST00000475581 FHAD1B1AJZ9 1412 aa19.95■□□□□ 0.78
AMPH-209ENST00000475581 GRIN2AQ12879 1464 aa19.94■□□□□ 0.78
AMPH-209ENST00000475581 TRHP20396 242 aaPredicted RBP19.9■□□□□ 0.78
AMPH-209ENST00000475581 ERICH3Q5RHP9 1530 aa19.9■□□□□ 0.78
AMPH-209ENST00000475581 ADAMTS12P58397 1594 aa19.87■□□□□ 0.77
AMPH-209ENST00000475581 NUP160Q12769 1436 aa19.87■□□□□ 0.77
AMPH-209ENST00000475581 IGF1RP08069 1367 aa19.83■□□□□ 0.77
AMPH-209ENST00000475581 KIF27Q86VH2 1401 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms