RNA–Protein interactions for RNA: ENST00000475476.2

IFT172-208, Transcript of intraflagellar transport 172, humanhuman

TSL 2

Gene IFT172, Length 781 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT172-208ENST00000475476 NISCHQ9Y2I1 1504 aa34.27■■■■□ 3.08
IFT172-208ENST00000475476 ABCC9O60706 1549 aa30.93■■■□□ 2.54
IFT172-208ENST00000475476 CCDC180Q9P1Z9 1646 aa30.73■■■□□ 2.51
IFT172-208ENST00000475476 RB1CC1Q8TDY2 1594 aa29.39■■■□□ 2.3
IFT172-208ENST00000475476 NACADO15069 1562 aa29.18■■■□□ 2.26
IFT172-208ENST00000475476 DNAJC5BQ9UF47 199 aa29.17■■■□□ 2.26
IFT172-208ENST00000475476 DCAF8L2P0C7V8 631 aa29.14■■■□□ 2.26
IFT172-208ENST00000475476 PABPN1Q86U42 306 aaKnown RBP eCLIP28.85■■■□□ 2.21
IFT172-208ENST00000475476 MYO15BQ96JP2 1530 aa28.74■■■□□ 2.19
IFT172-208ENST00000475476 UNC13AQ9UPW8 1703 aa28.54■■■□□ 2.16
IFT172-208ENST00000475476 BICRAQ9NZM4 1560 aa28.46■■■□□ 2.15
IFT172-208ENST00000475476 ZCCHC6Q5VYS8 1495 aaKnown RBP28.34■■■□□ 2.13
IFT172-208ENST00000475476 DCAF1Q9Y4B6 1507 aa28.31■■■□□ 2.12
IFT172-208ENST00000475476 SHROOM4Q9ULL8 1493 aa28.18■■■□□ 2.1
IFT172-208ENST00000475476 SCRIBQ14160 1630 aa28■■■□□ 2.07
IFT172-208ENST00000475476 CECR2Q9BXF3 1484 aa27.91■■■□□ 2.06
IFT172-208ENST00000475476 CC2D2AQ9P2K1 1620 aa27.9■■■□□ 2.06
IFT172-208ENST00000475476 EIF4G1Q04637 1599 aaKnown RBP27.82■■■□□ 2.04
IFT172-208ENST00000475476 DNAJC5Q9H3Z4 198 aa26.97■■□□□ 1.91
IFT172-208ENST00000475476 NCAPD3P42695 1498 aa26.97■■□□□ 1.91
IFT172-208ENST00000475476 ATAD2BQ9ULI0 1458 aa26.83■■□□□ 1.89
IFT172-208ENST00000475476 ERCC6Q03468 1493 aa26.78■■□□□ 1.88
IFT172-208ENST00000475476 SMARCA2P51531 1590 aa26.75■■□□□ 1.87
IFT172-208ENST00000475476 CUX2O14529 1486 aa26.75■■□□□ 1.87
IFT172-208ENST00000475476 SMARCA4P51532 1647 aa26.7■■□□□ 1.86
IFT172-208ENST00000475476 HMGXB3Q12766 1538 aa26.69■■□□□ 1.86
IFT172-208ENST00000475476 BAZ1AQ9NRL2 1556 aaPredicted RBP26.62■■□□□ 1.85
IFT172-208ENST00000475476 BAZ1BQ9UIG0 1483 aaKnown RBP26.58■■□□□ 1.85
IFT172-208ENST00000475476 NESP48681 1621 aa26.5■■□□□ 1.83
IFT172-208ENST00000475476 PEG3Q9GZU2 1588 aa26.46■■□□□ 1.83
IFT172-208ENST00000475476 MROH2BQ7Z745 1585 aa26.37■■□□□ 1.81
IFT172-208ENST00000475476 LAMC3Q9Y6N6 1575 aa26.33■■□□□ 1.81
IFT172-208ENST00000475476 PDS5BQ9NTI5 1447 aa26.29■■□□□ 1.8
IFT172-208ENST00000475476 THOC2Q8NI27 1593 aaKnown RBP26.2■■□□□ 1.79
IFT172-208ENST00000475476 CADPSQ9ULU8 1353 aa26.18■■□□□ 1.78
IFT172-208ENST00000475476 KIF21AQ7Z4S6 1674 aa26.07■■□□□ 1.76
IFT172-208ENST00000475476 WIZO95785 1651 aa26■■□□□ 1.75
IFT172-208ENST00000475476 MRC2Q9UBG0 1479 aa25.98■■□□□ 1.75
IFT172-208ENST00000475476 WDR62O43379 1518 aa25.88■■□□□ 1.73
IFT172-208ENST00000475476 CEP164Q9UPV0 1460 aa25.86■■□□□ 1.73
IFT172-208ENST00000475476 RSF1Q96T23 1441 aaPredicted RBP25.83■■□□□ 1.73
IFT172-208ENST00000475476 FANCD2Q9BXW9 1451 aa25.83■■□□□ 1.73
IFT172-208ENST00000475476 CFTRP13569 1480 aa25.8■■□□□ 1.72
IFT172-208ENST00000475476 TRIM41Q8WV44 630 aa25.73■■□□□ 1.71
IFT172-208ENST00000475476 TOP2AP11388 1531 aaKnown RBP25.71■■□□□ 1.71
IFT172-208ENST00000475476 OSCARQ8IYS5 282 aa25.63■■□□□ 1.69
IFT172-208ENST00000475476 URB2Q14146 1524 aaKnown RBP25.57■■□□□ 1.68
IFT172-208ENST00000475476 CCDC88BA6NC98 1476 aa25.47■■□□□ 1.67
IFT172-208ENST00000475476 IFT140Q96RY7 1462 aa25.37■■□□□ 1.65
IFT172-208ENST00000475476 PRDM2Q13029 1718 aa25.35■■□□□ 1.65
IFT172-208ENST00000475476 ABCC8Q09428 1581 aa25.32■■□□□ 1.64
IFT172-208ENST00000475476 TOPBP1Q92547 1522 aa25.29■■□□□ 1.64
IFT172-208ENST00000475476 ZNF608Q9ULD9 1512 aaPredicted RBP25.28■■□□□ 1.64
IFT172-208ENST00000475476 DNMBPQ6XZF7 1577 aa25.17■■□□□ 1.62
IFT172-208ENST00000475476 RIMBP3CA6NJZ7 1639 aa25.11■■□□□ 1.61
IFT172-208ENST00000475476 RIMBP3BA6NNM3 1639 aa25.11■■□□□ 1.61
IFT172-208ENST00000475476 RIMBP3Q9UFD9 1639 aa25.11■■□□□ 1.61
IFT172-208ENST00000475476 EIF4G3O43432 1585 aaKnown RBP25.09■■□□□ 1.61
IFT172-208ENST00000475476 AQRO60306 1485 aaKnown RBP eCLIP25.09■■□□□ 1.61
IFT172-208ENST00000475476 ARHGEF11O15085 1522 aa25.06■■□□□ 1.6
IFT172-208ENST00000475476 FBLN2P98095 1184 aa25.05■■□□□ 1.6
IFT172-208ENST00000475476 TARBP1Q13395 1621 aaKnown RBP25.03■■□□□ 1.6
IFT172-208ENST00000475476 POLA1P09884 1462 aaPredicted RBP25.02■■□□□ 1.6
IFT172-208ENST00000475476 CYB5RLQ6IPT4 315 aa25.01■■□□□ 1.59
IFT172-208ENST00000475476 SOGA1O94964 1423 aa24.98■■□□□ 1.59
IFT172-208ENST00000475476 TDRD9Q8NDG6 1382 aaKnown RBP24.94■■□□□ 1.58
IFT172-208ENST00000475476 RAD54L2Q9Y4B4 1467 aa24.94■■□□□ 1.58
IFT172-208ENST00000475476 CHD1O14646 1710 aa24.88■■□□□ 1.57
IFT172-208ENST00000475476 CHMP7Q8WUX9 453 aaPredicted RBP24.86■■□□□ 1.57
IFT172-208ENST00000475476 FGD5Q6ZNL6 1462 aa24.84■■□□□ 1.57
IFT172-208ENST00000475476 WDR97A6NE52 1622 aa24.82■■□□□ 1.56
IFT172-208ENST00000475476 TRHP20396 242 aaPredicted RBP24.81■■□□□ 1.56
IFT172-208ENST00000475476 SNAPC4Q5SXM2 1469 aa24.79■■□□□ 1.56
IFT172-208ENST00000475476 ARAP1Q96P48 1450 aa24.79■■□□□ 1.56
IFT172-208ENST00000475476 CUX1P39880 1505 aa24.78■■□□□ 1.56
IFT172-208ENST00000475476 GRIN2BQ13224 1484 aa24.76■■□□□ 1.55
IFT172-208ENST00000475476 MAGI1Q96QZ7 1491 aaPredicted RBP24.76■■□□□ 1.55
IFT172-208ENST00000475476 SYNJ1O43426 1573 aa24.69■■□□□ 1.54
IFT172-208ENST00000475476 SYNJ2O15056 1496 aa24.68■■□□□ 1.54
IFT172-208ENST00000475476 SUPT5HO00267 1087 aaKnown RBP24.67■■□□□ 1.54
IFT172-208ENST00000475476 CLASP1Q7Z460 1538 aa24.66■■□□□ 1.54
IFT172-208ENST00000475476 GAPVD1Q14C86 1478 aa24.65■■□□□ 1.54
IFT172-208ENST00000475476 ABCA10Q8WWZ4 1543 aa24.58■■□□□ 1.53
IFT172-208ENST00000475476 WRNQ14191 1432 aaPredicted RBP eCLIP24.52■■□□□ 1.52
IFT172-208ENST00000475476 PBRM1Q86U86 1689 aa24.5■■□□□ 1.51
IFT172-208ENST00000475476 ABCA5Q8WWZ7 1642 aa24.46■■□□□ 1.51
IFT172-208ENST00000475476 GRIN2AQ12879 1464 aa24.41■■□□□ 1.5
IFT172-208ENST00000475476 TOP2BQ02880 1626 aa24.35■■□□□ 1.49
IFT172-208ENST00000475476 FHAD1B1AJZ9 1412 aa24.35■■□□□ 1.49
IFT172-208ENST00000475476 NUP160Q12769 1436 aa24.34■■□□□ 1.49
IFT172-208ENST00000475476 BIVM-ERCC5R4GMW8 1640 aa24.31■■□□□ 1.48
IFT172-208ENST00000475476 ADAMTS12P58397 1594 aa24.3■■□□□ 1.48
IFT172-208ENST00000475476 ERICH3Q5RHP9 1530 aa24.27■■□□□ 1.48
IFT172-208ENST00000475476 CEP170Q5SW79 1584 aa24.26■■□□□ 1.47
IFT172-208ENST00000475476 ERCC6L2Q5T890 1561 aa24.24■■□□□ 1.47
IFT172-208ENST00000475476 AEBP2Q6ZN18 517 aaPredicted RBP24.21■■□□□ 1.47
IFT172-208ENST00000475476 JPH4Q96JJ6 628 aa24.2■■□□□ 1.46
IFT172-208ENST00000475476 SHROOM2Q13796 1616 aa24.17■■□□□ 1.46
IFT172-208ENST00000475476 PRG4Q92954 1404 aaPredicted RBP24.15■■□□□ 1.46
IFT172-208ENST00000475476 NPM1P06748 294 aaKnown RBP eCLIP24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms