RNA–Protein interactions for RNA: ENST00000475436.1

HS3ST4-202, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 4, humanhuman

TSL 3

Gene HS3ST4, Length 772 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4-202ENST00000475436 NISCHQ9Y2I1 1504 aa22.74■■□□□ 1.23
HS3ST4-202ENST00000475436 CCDC180Q9P1Z9 1646 aa20.31■□□□□ 0.84
HS3ST4-202ENST00000475436 ABCC9O60706 1549 aa20.02■□□□□ 0.79
HS3ST4-202ENST00000475436 RB1CC1Q8TDY2 1594 aa19.17■□□□□ 0.66
HS3ST4-202ENST00000475436 NACADO15069 1562 aa19.1■□□□□ 0.65
HS3ST4-202ENST00000475436 DCAF8L2P0C7V8 631 aa18.96■□□□□ 0.63
HS3ST4-202ENST00000475436 ZCCHC6Q5VYS8 1495 aaKnown RBP18.96■□□□□ 0.63
HS3ST4-202ENST00000475436 MYO15BQ96JP2 1530 aa18.93■□□□□ 0.62
HS3ST4-202ENST00000475436 UNC13AQ9UPW8 1703 aa18.8■□□□□ 0.6
HS3ST4-202ENST00000475436 DCAF1Q9Y4B6 1507 aa18.8■□□□□ 0.6
HS3ST4-202ENST00000475436 BICRAQ9NZM4 1560 aa18.64■□□□□ 0.58
HS3ST4-202ENST00000475436 PABPN1Q86U42 306 aaKnown RBP eCLIP18.64■□□□□ 0.57
HS3ST4-202ENST00000475436 SCRIBQ14160 1630 aa18.56■□□□□ 0.56
HS3ST4-202ENST00000475436 DNAJC5BQ9UF47 199 aa18.48■□□□□ 0.55
HS3ST4-202ENST00000475436 SHROOM4Q9ULL8 1493 aa18.39■□□□□ 0.53
HS3ST4-202ENST00000475436 AEBP2Q6ZN18 517 aaPredicted RBP18.32■□□□□ 0.52
HS3ST4-202ENST00000475436 EIF4G1Q04637 1599 aaKnown RBP18.15■□□□□ 0.5
HS3ST4-202ENST00000475436 CC2D2AQ9P2K1 1620 aa18.12■□□□□ 0.49
HS3ST4-202ENST00000475436 CECR2Q9BXF3 1484 aa17.99■□□□□ 0.47
HS3ST4-202ENST00000475436 SMARCA4P51532 1647 aa17.72■□□□□ 0.43
HS3ST4-202ENST00000475436 BAZ1AQ9NRL2 1556 aaPredicted RBP17.63■□□□□ 0.41
HS3ST4-202ENST00000475436 ATAD2BQ9ULI0 1458 aa17.63■□□□□ 0.41
HS3ST4-202ENST00000475436 NCAPD3P42695 1498 aa17.61■□□□□ 0.41
HS3ST4-202ENST00000475436 SMARCA2P51531 1590 aa17.58■□□□□ 0.41
HS3ST4-202ENST00000475436 HMGXB3Q12766 1538 aa17.57■□□□□ 0.4
HS3ST4-202ENST00000475436 MROH2BQ7Z745 1585 aa17.55■□□□□ 0.4
HS3ST4-202ENST00000475436 PEG3Q9GZU2 1588 aa17.53■□□□□ 0.4
HS3ST4-202ENST00000475436 BAZ1BQ9UIG0 1483 aaKnown RBP17.47■□□□□ 0.39
HS3ST4-202ENST00000475436 WIZO95785 1651 aa17.36■□□□□ 0.37
HS3ST4-202ENST00000475436 NESP48681 1621 aa17.29■□□□□ 0.36
HS3ST4-202ENST00000475436 RSF1Q96T23 1441 aaPredicted RBP17.27■□□□□ 0.35
HS3ST4-202ENST00000475436 ERCC6Q03468 1493 aa17.24■□□□□ 0.35
HS3ST4-202ENST00000475436 LAMC3Q9Y6N6 1575 aa17.19■□□□□ 0.34
HS3ST4-202ENST00000475436 TOP2AP11388 1531 aaKnown RBP17.16■□□□□ 0.34
HS3ST4-202ENST00000475436 CUX2O14529 1486 aa17.12■□□□□ 0.33
HS3ST4-202ENST00000475436 KIF21AQ7Z4S6 1674 aa17.11■□□□□ 0.33
HS3ST4-202ENST00000475436 THOC2Q8NI27 1593 aaKnown RBP17.11■□□□□ 0.33
HS3ST4-202ENST00000475436 CADPSQ9ULU8 1353 aa17.08■□□□□ 0.32
HS3ST4-202ENST00000475436 CHIC1Q5VXU3 224 aa17.07■□□□□ 0.32
HS3ST4-202ENST00000475436 PDS5BQ9NTI5 1447 aa17.04■□□□□ 0.32
HS3ST4-202ENST00000475436 CFTRP13569 1480 aa16.98■□□□□ 0.31
HS3ST4-202ENST00000475436 MRC2Q9UBG0 1479 aa16.93■□□□□ 0.3
HS3ST4-202ENST00000475436 CCDC88BA6NC98 1476 aa16.93■□□□□ 0.3
HS3ST4-202ENST00000475436 FANCD2Q9BXW9 1451 aa16.93■□□□□ 0.3
HS3ST4-202ENST00000475436 CEP164Q9UPV0 1460 aa16.92■□□□□ 0.3
HS3ST4-202ENST00000475436 WDR62O43379 1518 aa16.91■□□□□ 0.3
HS3ST4-202ENST00000475436 PRDM2Q13029 1718 aa16.89■□□□□ 0.29
HS3ST4-202ENST00000475436 URB2Q14146 1524 aaKnown RBP16.79■□□□□ 0.28
HS3ST4-202ENST00000475436 DNAJC5Q9H3Z4 198 aa16.71■□□□□ 0.27
HS3ST4-202ENST00000475436 TOPBP1Q92547 1522 aa16.65■□□□□ 0.26
HS3ST4-202ENST00000475436 SUPT5HO00267 1087 aaKnown RBP16.64■□□□□ 0.25
HS3ST4-202ENST00000475436 DNMBPQ6XZF7 1577 aa16.62■□□□□ 0.25
HS3ST4-202ENST00000475436 ABCC8Q09428 1581 aa16.55■□□□□ 0.24
HS3ST4-202ENST00000475436 IFT140Q96RY7 1462 aa16.55■□□□□ 0.24
HS3ST4-202ENST00000475436 ZNF608Q9ULD9 1512 aaPredicted RBP16.54■□□□□ 0.24
HS3ST4-202ENST00000475436 POLA1P09884 1462 aaPredicted RBP16.5■□□□□ 0.23
HS3ST4-202ENST00000475436 TARBP1Q13395 1621 aaKnown RBP16.49■□□□□ 0.23
HS3ST4-202ENST00000475436 EIF4G3O43432 1585 aaKnown RBP16.49■□□□□ 0.23
HS3ST4-202ENST00000475436 CUX1P39880 1505 aa16.49■□□□□ 0.23
HS3ST4-202ENST00000475436 FGD5Q6ZNL6 1462 aa16.43■□□□□ 0.22
HS3ST4-202ENST00000475436 RAD54L2Q9Y4B4 1467 aa16.42■□□□□ 0.22
HS3ST4-202ENST00000475436 AQRO60306 1485 aaKnown RBP eCLIP16.39■□□□□ 0.21
HS3ST4-202ENST00000475436 SOGA1O94964 1423 aa16.36■□□□□ 0.21
HS3ST4-202ENST00000475436 WDR97A6NE52 1622 aa16.36■□□□□ 0.21
HS3ST4-202ENST00000475436 TDRD9Q8NDG6 1382 aaKnown RBP16.31■□□□□ 0.2
HS3ST4-202ENST00000475436 CHD1O14646 1710 aa16.31■□□□□ 0.2
HS3ST4-202ENST00000475436 SYNJ1O43426 1573 aa16.3■□□□□ 0.2
HS3ST4-202ENST00000475436 BIVM-ERCC5R4GMW8 1640 aa16.3■□□□□ 0.2
HS3ST4-202ENST00000475436 OSCARQ8IYS5 282 aa16.29■□□□□ 0.2
HS3ST4-202ENST00000475436 TOP2BQ02880 1626 aa16.28■□□□□ 0.2
HS3ST4-202ENST00000475436 SNAPC4Q5SXM2 1469 aa16.27■□□□□ 0.19
HS3ST4-202ENST00000475436 WRNQ14191 1432 aaPredicted RBP eCLIP16.27■□□□□ 0.19
HS3ST4-202ENST00000475436 ABCA10Q8WWZ4 1543 aa16.26■□□□□ 0.19
HS3ST4-202ENST00000475436 ABCA5Q8WWZ7 1642 aa16.25■□□□□ 0.19
HS3ST4-202ENST00000475436 PBRM1Q86U86 1689 aa16.24■□□□□ 0.19
HS3ST4-202ENST00000475436 GRIN2BQ13224 1484 aa16.22■□□□□ 0.19
HS3ST4-202ENST00000475436 GAPVD1Q14C86 1478 aa16.21■□□□□ 0.19
HS3ST4-202ENST00000475436 MAGI1Q96QZ7 1491 aaPredicted RBP16.21■□□□□ 0.19
HS3ST4-202ENST00000475436 RIMBP3CA6NJZ7 1639 aa16.18■□□□□ 0.18
HS3ST4-202ENST00000475436 RIMBP3BA6NNM3 1639 aa16.18■□□□□ 0.18
HS3ST4-202ENST00000475436 RIMBP3Q9UFD9 1639 aa16.18■□□□□ 0.18
HS3ST4-202ENST00000475436 ARHGEF11O15085 1522 aa16.15■□□□□ 0.18
HS3ST4-202ENST00000475436 FBLN2P98095 1184 aa16.15■□□□□ 0.18
HS3ST4-202ENST00000475436 SYNJ2O15056 1496 aa16.14■□□□□ 0.17
HS3ST4-202ENST00000475436 TRIM41Q8WV44 630 aa16.12■□□□□ 0.17
HS3ST4-202ENST00000475436 CLASP1Q7Z460 1538 aa16.12■□□□□ 0.17
HS3ST4-202ENST00000475436 ADAMTS12P58397 1594 aa16.12■□□□□ 0.17
HS3ST4-202ENST00000475436 CHMP7Q8WUX9 453 aaPredicted RBP16.08■□□□□ 0.16
HS3ST4-202ENST00000475436 ERICH3Q5RHP9 1530 aa16.05■□□□□ 0.16
HS3ST4-202ENST00000475436 GRIN2AQ12879 1464 aa16.03■□□□□ 0.16
HS3ST4-202ENST00000475436 ARAP1Q96P48 1450 aa16.03■□□□□ 0.16
HS3ST4-202ENST00000475436 FHAD1B1AJZ9 1412 aa16■□□□□ 0.15
HS3ST4-202ENST00000475436 CEP170Q5SW79 1584 aa16■□□□□ 0.15
HS3ST4-202ENST00000475436 NUP160Q12769 1436 aa15.98■□□□□ 0.15
HS3ST4-202ENST00000475436 KIF27Q86VH2 1401 aa15.92■□□□□ 0.14
HS3ST4-202ENST00000475436 CYB5RLQ6IPT4 315 aa15.91■□□□□ 0.14
HS3ST4-202ENST00000475436 ERCC6L2Q5T890 1561 aa15.91■□□□□ 0.14
HS3ST4-202ENST00000475436 SHROOM2Q13796 1616 aa15.9■□□□□ 0.14
HS3ST4-202ENST00000475436 CUL7Q14999 1698 aa15.89■□□□□ 0.13
HS3ST4-202ENST00000475436 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms