RNA–Protein interactions for RNA: ENST00000475402.1

PCBP3-212, Transcript of poly(rC) binding protein 3, humanhuman

TSL 3

Gene PCBP3, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP3-212ENST00000475402 NISCHQ9Y2I1 1504 aa20.7■□□□□ 0.9
PCBP3-212ENST00000475402 CCDC180Q9P1Z9 1646 aa18.4■□□□□ 0.54
PCBP3-212ENST00000475402 ABCC9O60706 1549 aa17.89■□□□□ 0.45
PCBP3-212ENST00000475402 ZCCHC6Q5VYS8 1495 aaKnown RBP17.28■□□□□ 0.36
PCBP3-212ENST00000475402 NACADO15069 1562 aa17.27■□□□□ 0.35
PCBP3-212ENST00000475402 MYO15BQ96JP2 1530 aa17.26■□□□□ 0.35
PCBP3-212ENST00000475402 RB1CC1Q8TDY2 1594 aa17.25■□□□□ 0.35
PCBP3-212ENST00000475402 DCAF1Q9Y4B6 1507 aa17.18■□□□□ 0.34
PCBP3-212ENST00000475402 DCAF8L2P0C7V8 631 aa17.01■□□□□ 0.31
PCBP3-212ENST00000475402 UNC13AQ9UPW8 1703 aa16.92■□□□□ 0.3
PCBP3-212ENST00000475402 BICRAQ9NZM4 1560 aa16.84■□□□□ 0.29
PCBP3-212ENST00000475402 SCRIBQ14160 1630 aa16.72■□□□□ 0.27
PCBP3-212ENST00000475402 PABPN1Q86U42 306 aaKnown RBP eCLIP16.69■□□□□ 0.26
PCBP3-212ENST00000475402 SHROOM4Q9ULL8 1493 aa16.64■□□□□ 0.25
PCBP3-212ENST00000475402 DNAJC5BQ9UF47 199 aa16.48■□□□□ 0.23
PCBP3-212ENST00000475402 EIF4G1Q04637 1599 aaKnown RBP16.33■□□□□ 0.2
PCBP3-212ENST00000475402 CC2D2AQ9P2K1 1620 aa16.24■□□□□ 0.19
PCBP3-212ENST00000475402 CECR2Q9BXF3 1484 aa16.12■□□□□ 0.17
PCBP3-212ENST00000475402 SMARCA4P51532 1647 aa16.05■□□□□ 0.16
PCBP3-212ENST00000475402 BAZ1AQ9NRL2 1556 aaPredicted RBP16.01■□□□□ 0.15
PCBP3-212ENST00000475402 NCAPD3P42695 1498 aa15.97■□□□□ 0.15
PCBP3-212ENST00000475402 PEG3Q9GZU2 1588 aa15.96■□□□□ 0.15
PCBP3-212ENST00000475402 ATAD2BQ9ULI0 1458 aa15.96■□□□□ 0.14
PCBP3-212ENST00000475402 MROH2BQ7Z745 1585 aa15.95■□□□□ 0.14
PCBP3-212ENST00000475402 SMARCA2P51531 1590 aa15.91■□□□□ 0.14
PCBP3-212ENST00000475402 HMGXB3Q12766 1538 aa15.89■□□□□ 0.13
PCBP3-212ENST00000475402 RSF1Q96T23 1441 aaPredicted RBP15.77■□□□□ 0.12
PCBP3-212ENST00000475402 BAZ1BQ9UIG0 1483 aaKnown RBP15.77■□□□□ 0.11
PCBP3-212ENST00000475402 WIZO95785 1651 aa15.76■□□□□ 0.11
PCBP3-212ENST00000475402 TOP2AP11388 1531 aaKnown RBP15.61■□□□□ 0.09
PCBP3-212ENST00000475402 NESP48681 1621 aa15.54■□□□□ 0.08
PCBP3-212ENST00000475402 LAMC3Q9Y6N6 1575 aa15.51■□□□□ 0.07
PCBP3-212ENST00000475402 AEBP2Q6ZN18 517 aaPredicted RBP15.49■□□□□ 0.07
PCBP3-212ENST00000475402 CHIC1Q5VXU3 224 aa15.48■□□□□ 0.07
PCBP3-212ENST00000475402 CADPSQ9ULU8 1353 aa15.45■□□□□ 0.06
PCBP3-212ENST00000475402 CCDC88BA6NC98 1476 aa15.41■□□□□ 0.06
PCBP3-212ENST00000475402 CFTRP13569 1480 aa15.41■□□□□ 0.06
PCBP3-212ENST00000475402 ERCC6Q03468 1493 aa15.36■□□□□ 0.05
PCBP3-212ENST00000475402 THOC2Q8NI27 1593 aaKnown RBP15.36■□□□□ 0.05
PCBP3-212ENST00000475402 KIF21AQ7Z4S6 1674 aa15.35■□□□□ 0.05
PCBP3-212ENST00000475402 PDS5BQ9NTI5 1447 aa15.34■□□□□ 0.05
PCBP3-212ENST00000475402 CUX2O14529 1486 aa15.29■□□□□ 0.04
PCBP3-212ENST00000475402 FANCD2Q9BXW9 1451 aa15.27■□□□□ 0.03
PCBP3-212ENST00000475402 PRDM2Q13029 1718 aa15.26■□□□□ 0.03
PCBP3-212ENST00000475402 WDR62O43379 1518 aa15.23■□□□□ 0.03
PCBP3-212ENST00000475402 MRC2Q9UBG0 1479 aa15.22■□□□□ 0.03
PCBP3-212ENST00000475402 CEP164Q9UPV0 1460 aa15.22■□□□□ 0.03
PCBP3-212ENST00000475402 SUPT5HO00267 1087 aaKnown RBP15.19■□□□□ 0.02
PCBP3-212ENST00000475402 URB2Q14146 1524 aaKnown RBP15.16■□□□□ 0.02
PCBP3-212ENST00000475402 TOPBP1Q92547 1522 aa15.04■□□□□ -0
PCBP3-212ENST00000475402 DNMBPQ6XZF7 1577 aa15.03■□□□□ -0
PCBP3-212ENST00000475402 ABCC8Q09428 1581 aa15□□□□□ -0.01
PCBP3-212ENST00000475402 CUX1P39880 1505 aa14.96□□□□□ -0.02
PCBP3-212ENST00000475402 DNAJC5Q9H3Z4 198 aa14.93□□□□□ -0.02
PCBP3-212ENST00000475402 POLA1P09884 1462 aaPredicted RBP14.93□□□□□ -0.02
PCBP3-212ENST00000475402 TARBP1Q13395 1621 aaKnown RBP14.92□□□□□ -0.02
PCBP3-212ENST00000475402 IFT140Q96RY7 1462 aa14.92□□□□□ -0.02
PCBP3-212ENST00000475402 ZNF608Q9ULD9 1512 aaPredicted RBP14.89□□□□□ -0.03
PCBP3-212ENST00000475402 FGD5Q6ZNL6 1462 aa14.88□□□□□ -0.03
PCBP3-212ENST00000475402 BIVM-ERCC5R4GMW8 1640 aa14.84□□□□□ -0.03
PCBP3-212ENST00000475402 SYNJ1O43426 1573 aa14.84□□□□□ -0.03
PCBP3-212ENST00000475402 TOP2BQ02880 1626 aa14.84□□□□□ -0.03
PCBP3-212ENST00000475402 RAD54L2Q9Y4B4 1467 aa14.83□□□□□ -0.03
PCBP3-212ENST00000475402 EIF4G3O43432 1585 aaKnown RBP14.83□□□□□ -0.04
PCBP3-212ENST00000475402 WDR97A6NE52 1622 aa14.82□□□□□ -0.04
PCBP3-212ENST00000475402 WRNQ14191 1432 aaPredicted RBP eCLIP14.82□□□□□ -0.04
PCBP3-212ENST00000475402 SOGA1O94964 1423 aa14.8□□□□□ -0.04
PCBP3-212ENST00000475402 ABCA10Q8WWZ4 1543 aa14.76□□□□□ -0.05
PCBP3-212ENST00000475402 AQRO60306 1485 aaKnown RBP eCLIP14.76□□□□□ -0.05
PCBP3-212ENST00000475402 ABCA5Q8WWZ7 1642 aa14.73□□□□□ -0.05
PCBP3-212ENST00000475402 TDRD9Q8NDG6 1382 aaKnown RBP14.72□□□□□ -0.05
PCBP3-212ENST00000475402 GRIN2BQ13224 1484 aa14.65□□□□□ -0.06
PCBP3-212ENST00000475402 GAPVD1Q14C86 1478 aa14.64□□□□□ -0.07
PCBP3-212ENST00000475402 PBRM1Q86U86 1689 aa14.64□□□□□ -0.07
PCBP3-212ENST00000475402 SNAPC4Q5SXM2 1469 aa14.63□□□□□ -0.07
PCBP3-212ENST00000475402 MAGI1Q96QZ7 1491 aaPredicted RBP14.63□□□□□ -0.07
PCBP3-212ENST00000475402 CHD1O14646 1710 aa14.61□□□□□ -0.07
PCBP3-212ENST00000475402 SYNJ2O15056 1496 aa14.57□□□□□ -0.08
PCBP3-212ENST00000475402 ERICH3Q5RHP9 1530 aa14.57□□□□□ -0.08
PCBP3-212ENST00000475402 ADAMTS12P58397 1594 aa14.56□□□□□ -0.08
PCBP3-212ENST00000475402 OSCARQ8IYS5 282 aa14.56□□□□□ -0.08
PCBP3-212ENST00000475402 CLASP1Q7Z460 1538 aa14.52□□□□□ -0.08
PCBP3-212ENST00000475402 GRIN2AQ12879 1464 aa14.49□□□□□ -0.09
PCBP3-212ENST00000475402 FHAD1B1AJZ9 1412 aa14.49□□□□□ -0.09
PCBP3-212ENST00000475402 KIF27Q86VH2 1401 aa14.48□□□□□ -0.09
PCBP3-212ENST00000475402 IGF1RP08069 1367 aa14.47□□□□□ -0.09
PCBP3-212ENST00000475402 NUP160Q12769 1436 aa14.46□□□□□ -0.09
PCBP3-212ENST00000475402 CEP170Q5SW79 1584 aa14.44□□□□□ -0.1
PCBP3-212ENST00000475402 CHMP7Q8WUX9 453 aaPredicted RBP14.44□□□□□ -0.1
PCBP3-212ENST00000475402 ARHGEF11O15085 1522 aa14.43□□□□□ -0.1
PCBP3-212ENST00000475402 FBLN2P98095 1184 aa14.43□□□□□ -0.1
PCBP3-212ENST00000475402 RIMBP3CA6NJZ7 1639 aa14.43□□□□□ -0.1
PCBP3-212ENST00000475402 RIMBP3BA6NNM3 1639 aa14.43□□□□□ -0.1
PCBP3-212ENST00000475402 RIMBP3Q9UFD9 1639 aa14.43□□□□□ -0.1
PCBP3-212ENST00000475402 RUSC2Q8N2Y8 1516 aa14.42□□□□□ -0.1
PCBP3-212ENST00000475402 CUL7Q14999 1698 aa14.42□□□□□ -0.1
PCBP3-212ENST00000475402 SHROOM2Q13796 1616 aa14.37□□□□□ -0.11
PCBP3-212ENST00000475402 TRIM41Q8WV44 630 aa14.36□□□□□ -0.11
PCBP3-212ENST00000475402 CARMIL1Q5VZK9 1371 aa14.34□□□□□ -0.11
PCBP3-212ENST00000475402 ARAP1Q96P48 1450 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms