RNA–Protein interactions for RNA: ENST00000475296.5

PLS1-206, Transcript of plastin 1, humanhuman

TSL 3

Gene PLS1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS1-206ENST00000475296 NISCHQ9Y2I1 1504 aa32.15■■■□□ 2.74
PLS1-206ENST00000475296 AEBP2Q6ZN18 517 aaPredicted RBP30.27■■■□□ 2.44
PLS1-206ENST00000475296 CHIC1Q5VXU3 224 aa29.37■■■□□ 2.29
PLS1-206ENST00000475296 ABCC9O60706 1549 aa29.1■■■□□ 2.25
PLS1-206ENST00000475296 CCDC180Q9P1Z9 1646 aa28.83■■■□□ 2.21
PLS1-206ENST00000475296 RB1CC1Q8TDY2 1594 aa27.6■■■□□ 2.01
PLS1-206ENST00000475296 DCAF8L2P0C7V8 631 aa27.47■■□□□ 1.99
PLS1-206ENST00000475296 DNAJC5BQ9UF47 199 aa27.46■■□□□ 1.99
PLS1-206ENST00000475296 NACADO15069 1562 aa27.36■■□□□ 1.97
PLS1-206ENST00000475296 PABPN1Q86U42 306 aaKnown RBP eCLIP27.16■■□□□ 1.94
PLS1-206ENST00000475296 UNC13AQ9UPW8 1703 aa26.95■■□□□ 1.9
PLS1-206ENST00000475296 MYO15BQ96JP2 1530 aa26.9■■□□□ 1.9
PLS1-206ENST00000475296 BICRAQ9NZM4 1560 aa26.73■■□□□ 1.87
PLS1-206ENST00000475296 ZCCHC6Q5VYS8 1495 aaKnown RBP26.56■■□□□ 1.84
PLS1-206ENST00000475296 DCAF1Q9Y4B6 1507 aa26.49■■□□□ 1.83
PLS1-206ENST00000475296 SHROOM4Q9ULL8 1493 aa26.36■■□□□ 1.81
PLS1-206ENST00000475296 SCRIBQ14160 1630 aa26.33■■□□□ 1.81
PLS1-206ENST00000475296 CECR2Q9BXF3 1484 aa26.23■■□□□ 1.79
PLS1-206ENST00000475296 CC2D2AQ9P2K1 1620 aa26.22■■□□□ 1.79
PLS1-206ENST00000475296 EIF4G1Q04637 1599 aaKnown RBP26.12■■□□□ 1.77
PLS1-206ENST00000475296 PHF23Q9BUL5 403 aaPredicted RBP25.78■■□□□ 1.72
PLS1-206ENST00000475296 SENP3Q9H4L4 574 aaPredicted RBP25.77■■□□□ 1.72
PLS1-206ENST00000475296 DNAJC5Q9H3Z4 198 aa25.35■■□□□ 1.65
PLS1-206ENST00000475296 NCAPD3P42695 1498 aa25.28■■□□□ 1.64
PLS1-206ENST00000475296 ERCC6Q03468 1493 aa25.18■■□□□ 1.62
PLS1-206ENST00000475296 ATAD2BQ9ULI0 1458 aa25.18■■□□□ 1.62
PLS1-206ENST00000475296 CUX2O14529 1486 aa25.1■■□□□ 1.61
PLS1-206ENST00000475296 SMARCA2P51531 1590 aa25.1■■□□□ 1.61
PLS1-206ENST00000475296 SMARCA4P51532 1647 aa25.08■■□□□ 1.6
PLS1-206ENST00000475296 HMGXB3Q12766 1538 aa25.02■■□□□ 1.6
PLS1-206ENST00000475296 BAZ1AQ9NRL2 1556 aaPredicted RBP24.97■■□□□ 1.59
PLS1-206ENST00000475296 BAZ1BQ9UIG0 1483 aaKnown RBP24.96■■□□□ 1.59
PLS1-206ENST00000475296 NESP48681 1621 aa24.94■■□□□ 1.58
PLS1-206ENST00000475296 PEG3Q9GZU2 1588 aa24.8■■□□□ 1.56
PLS1-206ENST00000475296 MROH2BQ7Z745 1585 aa24.77■■□□□ 1.56
PLS1-206ENST00000475296 LAMC3Q9Y6N6 1575 aa24.71■■□□□ 1.55
PLS1-206ENST00000475296 PDS5BQ9NTI5 1447 aa24.65■■□□□ 1.54
PLS1-206ENST00000475296 THOC2Q8NI27 1593 aaKnown RBP24.61■■□□□ 1.53
PLS1-206ENST00000475296 CADPSQ9ULU8 1353 aa24.55■■□□□ 1.52
PLS1-206ENST00000475296 KIF21AQ7Z4S6 1674 aa24.55■■□□□ 1.52
PLS1-206ENST00000475296 WIZO95785 1651 aa24.46■■□□□ 1.51
PLS1-206ENST00000475296 MRC2Q9UBG0 1479 aa24.39■■□□□ 1.5
PLS1-206ENST00000475296 WDR62O43379 1518 aa24.29■■□□□ 1.48
PLS1-206ENST00000475296 CEP164Q9UPV0 1460 aa24.28■■□□□ 1.48
PLS1-206ENST00000475296 TRIM41Q8WV44 630 aa24.26■■□□□ 1.47
PLS1-206ENST00000475296 FANCD2Q9BXW9 1451 aa24.25■■□□□ 1.47
PLS1-206ENST00000475296 RSF1Q96T23 1441 aaPredicted RBP24.24■■□□□ 1.47
PLS1-206ENST00000475296 CFTRP13569 1480 aa24.19■■□□□ 1.46
PLS1-206ENST00000475296 TOP2AP11388 1531 aaKnown RBP24.13■■□□□ 1.45
PLS1-206ENST00000475296 OSCARQ8IYS5 282 aa24.08■■□□□ 1.45
PLS1-206ENST00000475296 URB2Q14146 1524 aaKnown RBP24.02■■□□□ 1.44
PLS1-206ENST00000475296 PRDM2Q13029 1718 aa23.93■■□□□ 1.42
PLS1-206ENST00000475296 CCDC88BA6NC98 1476 aa23.92■■□□□ 1.42
PLS1-206ENST00000475296 FOXD1Q16676 465 aa23.9■■□□□ 1.42
PLS1-206ENST00000475296 IFT140Q96RY7 1462 aa23.81■■□□□ 1.4
PLS1-206ENST00000475296 ZNF608Q9ULD9 1512 aaPredicted RBP23.77■■□□□ 1.4
PLS1-206ENST00000475296 TOPBP1Q92547 1522 aa23.75■■□□□ 1.39
PLS1-206ENST00000475296 PLPPR3Q6T4P5 718 aa23.75■■□□□ 1.39
PLS1-206ENST00000475296 ABCC8Q09428 1581 aa23.74■■□□□ 1.39
PLS1-206ENST00000475296 DNMBPQ6XZF7 1577 aa23.63■■□□□ 1.37
PLS1-206ENST00000475296 RIMBP3CA6NJZ7 1639 aa23.62■■□□□ 1.37
PLS1-206ENST00000475296 RIMBP3BA6NNM3 1639 aa23.62■■□□□ 1.37
PLS1-206ENST00000475296 RIMBP3Q9UFD9 1639 aa23.62■■□□□ 1.37
PLS1-206ENST00000475296 FBLN2P98095 1184 aa23.6■■□□□ 1.37
PLS1-206ENST00000475296 AQRO60306 1485 aaKnown RBP eCLIP23.59■■□□□ 1.37
PLS1-206ENST00000475296 EIF4G3O43432 1585 aaKnown RBP23.57■■□□□ 1.36
PLS1-206ENST00000475296 CYB5RLQ6IPT4 315 aa23.55■■□□□ 1.36
PLS1-206ENST00000475296 ARHGEF11O15085 1522 aa23.54■■□□□ 1.36
PLS1-206ENST00000475296 TARBP1Q13395 1621 aaKnown RBP23.5■■□□□ 1.35
PLS1-206ENST00000475296 POLA1P09884 1462 aaPredicted RBP23.49■■□□□ 1.35
PLS1-206ENST00000475296 SOGA1O94964 1423 aa23.47■■□□□ 1.35
PLS1-206ENST00000475296 RAD54L2Q9Y4B4 1467 aa23.45■■□□□ 1.34
PLS1-206ENST00000475296 TDRD9Q8NDG6 1382 aaKnown RBP23.45■■□□□ 1.34
PLS1-206ENST00000475296 CHD1O14646 1710 aa23.43■■□□□ 1.34
PLS1-206ENST00000475296 TRHP20396 242 aaPredicted RBP23.37■■□□□ 1.33
PLS1-206ENST00000475296 CHMP7Q8WUX9 453 aaPredicted RBP23.37■■□□□ 1.33
PLS1-206ENST00000475296 FGD5Q6ZNL6 1462 aa23.34■■□□□ 1.33
PLS1-206ENST00000475296 SNAPC4Q5SXM2 1469 aa23.3■■□□□ 1.32
PLS1-206ENST00000475296 ARAP1Q96P48 1450 aa23.3■■□□□ 1.32
PLS1-206ENST00000475296 CUX1P39880 1505 aa23.27■■□□□ 1.32
PLS1-206ENST00000475296 WDR97A6NE52 1622 aa23.24■■□□□ 1.31
PLS1-206ENST00000475296 SUPT5HO00267 1087 aaKnown RBP23.24■■□□□ 1.31
PLS1-206ENST00000475296 GRIN2BQ13224 1484 aa23.24■■□□□ 1.31
PLS1-206ENST00000475296 MAGI1Q96QZ7 1491 aaPredicted RBP23.23■■□□□ 1.31
PLS1-206ENST00000475296 SYNJ1O43426 1573 aa23.18■■□□□ 1.3
PLS1-206ENST00000475296 SYNJ2O15056 1496 aa23.17■■□□□ 1.3
PLS1-206ENST00000475296 CLASP1Q7Z460 1538 aa23.14■■□□□ 1.3
PLS1-206ENST00000475296 GAPVD1Q14C86 1478 aa23.14■■□□□ 1.29
PLS1-206ENST00000475296 ABCA10Q8WWZ4 1543 aa23.05■■□□□ 1.28
PLS1-206ENST00000475296 PBRM1Q86U86 1689 aa23.04■■□□□ 1.28
PLS1-206ENST00000475296 WRNQ14191 1432 aaPredicted RBP eCLIP23■■□□□ 1.27
PLS1-206ENST00000475296 ABCA5Q8WWZ7 1642 aa22.97■■□□□ 1.27
PLS1-206ENST00000475296 GRIN2AQ12879 1464 aa22.91■■□□□ 1.26
PLS1-206ENST00000475296 TOP2BQ02880 1626 aa22.86■■□□□ 1.25
PLS1-206ENST00000475296 FHAD1B1AJZ9 1412 aa22.84■■□□□ 1.25
PLS1-206ENST00000475296 BIVM-ERCC5R4GMW8 1640 aa22.83■■□□□ 1.25
PLS1-206ENST00000475296 ADAMTS12P58397 1594 aa22.82■■□□□ 1.24
PLS1-206ENST00000475296 NUP160Q12769 1436 aa22.82■■□□□ 1.24
PLS1-206ENST00000475296 PPP6R1Q9UPN7 881 aa22.81■■□□□ 1.24
PLS1-206ENST00000475296 ERCC6L2Q5T890 1561 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms