RNA–Protein interactions for RNA: ENST00000475283.2

SUSD1-206, Transcript of sushi domain containing 1, humanhuman

TSL 3

Gene SUSD1, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-206ENST00000475283 NISCHQ9Y2I1 1504 aa34.72■■■■□ 3.15
SUSD1-206ENST00000475283 CCDC180Q9P1Z9 1646 aa31.08■■■□□ 2.57
SUSD1-206ENST00000475283 ABCC9O60706 1549 aa31.03■■■□□ 2.56
SUSD1-206ENST00000475283 RB1CC1Q8TDY2 1594 aa29.6■■■□□ 2.33
SUSD1-206ENST00000475283 NACADO15069 1562 aa29.43■■■□□ 2.3
SUSD1-206ENST00000475283 DCAF8L2P0C7V8 631 aa29.38■■■□□ 2.29
SUSD1-206ENST00000475283 MYO15BQ96JP2 1530 aa29.07■■■□□ 2.24
SUSD1-206ENST00000475283 DNAJC5BQ9UF47 199 aa29.06■■■□□ 2.24
SUSD1-206ENST00000475283 PABPN1Q86U42 306 aaKnown RBP eCLIP28.95■■■□□ 2.22
SUSD1-206ENST00000475283 UNC13AQ9UPW8 1703 aa28.8■■■□□ 2.2
SUSD1-206ENST00000475283 ZCCHC6Q5VYS8 1495 aaKnown RBP28.77■■■□□ 2.2
SUSD1-206ENST00000475283 DCAF1Q9Y4B6 1507 aa28.71■■■□□ 2.19
SUSD1-206ENST00000475283 BICRAQ9NZM4 1560 aa28.66■■■□□ 2.18
SUSD1-206ENST00000475283 SHROOM4Q9ULL8 1493 aa28.38■■■□□ 2.13
SUSD1-206ENST00000475283 SCRIBQ14160 1630 aa28.3■■■□□ 2.12
SUSD1-206ENST00000475283 CC2D2AQ9P2K1 1620 aa28.01■■■□□ 2.07
SUSD1-206ENST00000475283 EIF4G1Q04637 1599 aaKnown RBP27.98■■■□□ 2.07
SUSD1-206ENST00000475283 CECR2Q9BXF3 1484 aa27.97■■■□□ 2.07
SUSD1-206ENST00000475283 NCAPD3P42695 1498 aa27.19■■□□□ 1.94
SUSD1-206ENST00000475283 ATAD2BQ9ULI0 1458 aa27.08■■□□□ 1.93
SUSD1-206ENST00000475283 SMARCA4P51532 1647 aa27.03■■□□□ 1.92
SUSD1-206ENST00000475283 SMARCA2P51531 1590 aa27.02■■□□□ 1.92
SUSD1-206ENST00000475283 BAZ1AQ9NRL2 1556 aaPredicted RBP26.96■■□□□ 1.91
SUSD1-206ENST00000475283 HMGXB3Q12766 1538 aa26.94■■□□□ 1.9
SUSD1-206ENST00000475283 ERCC6Q03468 1493 aa26.83■■□□□ 1.89
SUSD1-206ENST00000475283 BAZ1BQ9UIG0 1483 aaKnown RBP26.83■■□□□ 1.89
SUSD1-206ENST00000475283 PEG3Q9GZU2 1588 aa26.8■■□□□ 1.88
SUSD1-206ENST00000475283 CUX2O14529 1486 aa26.75■■□□□ 1.87
SUSD1-206ENST00000475283 MROH2BQ7Z745 1585 aa26.73■■□□□ 1.87
SUSD1-206ENST00000475283 DNAJC5Q9H3Z4 198 aa26.69■■□□□ 1.86
SUSD1-206ENST00000475283 NESP48681 1621 aa26.65■■□□□ 1.86
SUSD1-206ENST00000475283 LAMC3Q9Y6N6 1575 aa26.52■■□□□ 1.84
SUSD1-206ENST00000475283 PDS5BQ9NTI5 1447 aa26.43■■□□□ 1.82
SUSD1-206ENST00000475283 WIZO95785 1651 aa26.39■■□□□ 1.82
SUSD1-206ENST00000475283 CADPSQ9ULU8 1353 aa26.38■■□□□ 1.81
SUSD1-206ENST00000475283 THOC2Q8NI27 1593 aaKnown RBP26.33■■□□□ 1.8
SUSD1-206ENST00000475283 KIF21AQ7Z4S6 1674 aa26.26■■□□□ 1.79
SUSD1-206ENST00000475283 RSF1Q96T23 1441 aaPredicted RBP26.24■■□□□ 1.79
SUSD1-206ENST00000475283 MRC2Q9UBG0 1479 aa26.14■■□□□ 1.78
SUSD1-206ENST00000475283 TOP2AP11388 1531 aaKnown RBP26.09■■□□□ 1.77
SUSD1-206ENST00000475283 CFTRP13569 1480 aa26.06■■□□□ 1.76
SUSD1-206ENST00000475283 CEP164Q9UPV0 1460 aa26.05■■□□□ 1.76
SUSD1-206ENST00000475283 WDR62O43379 1518 aa26.04■■□□□ 1.76
SUSD1-206ENST00000475283 FANCD2Q9BXW9 1451 aa26.04■■□□□ 1.76
SUSD1-206ENST00000475283 AEBP2Q6ZN18 517 aaPredicted RBP26.03■■□□□ 1.76
SUSD1-206ENST00000475283 CCDC88BA6NC98 1476 aa25.83■■□□□ 1.73
SUSD1-206ENST00000475283 URB2Q14146 1524 aaKnown RBP25.78■■□□□ 1.72
SUSD1-206ENST00000475283 PRDM2Q13029 1718 aa25.7■■□□□ 1.7
SUSD1-206ENST00000475283 OSCARQ8IYS5 282 aa25.63■■□□□ 1.69
SUSD1-206ENST00000475283 ABCC8Q09428 1581 aa25.56■■□□□ 1.68
SUSD1-206ENST00000475283 IFT140Q96RY7 1462 aa25.56■■□□□ 1.68
SUSD1-206ENST00000475283 TOPBP1Q92547 1522 aa25.54■■□□□ 1.68
SUSD1-206ENST00000475283 TRIM41Q8WV44 630 aa25.53■■□□□ 1.68
SUSD1-206ENST00000475283 ZNF608Q9ULD9 1512 aaPredicted RBP25.45■■□□□ 1.66
SUSD1-206ENST00000475283 DNMBPQ6XZF7 1577 aa25.44■■□□□ 1.66
SUSD1-206ENST00000475283 POLA1P09884 1462 aaPredicted RBP25.28■■□□□ 1.64
SUSD1-206ENST00000475283 EIF4G3O43432 1585 aaKnown RBP25.28■■□□□ 1.64
SUSD1-206ENST00000475283 AQRO60306 1485 aaKnown RBP eCLIP25.27■■□□□ 1.641e-7■■■□□ 16.1
SUSD1-206ENST00000475283 TARBP1Q13395 1621 aaKnown RBP25.26■■□□□ 1.63
SUSD1-206ENST00000475283 SOGA1O94964 1423 aa25.23■■□□□ 1.63
SUSD1-206ENST00000475283 SUPT5HO00267 1087 aaKnown RBP25.21■■□□□ 1.63
SUSD1-206ENST00000475283 RAD54L2Q9Y4B4 1467 aa25.19■■□□□ 1.62
SUSD1-206ENST00000475283 FBLN2P98095 1184 aa25.16■■□□□ 1.62
SUSD1-206ENST00000475283 TDRD9Q8NDG6 1382 aaKnown RBP25.15■■□□□ 1.62
SUSD1-206ENST00000475283 RIMBP3CA6NJZ7 1639 aa25.13■■□□□ 1.61
SUSD1-206ENST00000475283 RIMBP3BA6NNM3 1639 aa25.13■■□□□ 1.61
SUSD1-206ENST00000475283 RIMBP3Q9UFD9 1639 aa25.13■■□□□ 1.61
SUSD1-206ENST00000475283 FGD5Q6ZNL6 1462 aa25.13■■□□□ 1.61
SUSD1-206ENST00000475283 CHIC1Q5VXU3 224 aa25.12■■□□□ 1.61
SUSD1-206ENST00000475283 CUX1P39880 1505 aa25.1■■□□□ 1.61
SUSD1-206ENST00000475283 ARHGEF11O15085 1522 aa25.09■■□□□ 1.61
SUSD1-206ENST00000475283 WDR97A6NE52 1622 aa25.07■■□□□ 1.6
SUSD1-206ENST00000475283 CHD1O14646 1710 aa25.06■■□□□ 1.6
SUSD1-206ENST00000475283 CHMP7Q8WUX9 453 aaPredicted RBP25.01■■□□□ 1.59
SUSD1-206ENST00000475283 CYB5RLQ6IPT4 315 aa25■■□□□ 1.59
SUSD1-206ENST00000475283 SNAPC4Q5SXM2 1469 aa24.99■■□□□ 1.59
SUSD1-206ENST00000475283 GRIN2BQ13224 1484 aa24.98■■□□□ 1.59
SUSD1-206ENST00000475283 MAGI1Q96QZ7 1491 aaPredicted RBP24.96■■□□□ 1.59
SUSD1-206ENST00000475283 GAPVD1Q14C86 1478 aa24.89■■□□□ 1.58
SUSD1-206ENST00000475283 SYNJ2O15056 1496 aa24.88■■□□□ 1.57
SUSD1-206ENST00000475283 ABCA10Q8WWZ4 1543 aa24.87■■□□□ 1.57
SUSD1-206ENST00000475283 SYNJ1O43426 1573 aa24.85■■□□□ 1.57
SUSD1-206ENST00000475283 WRNQ14191 1432 aaPredicted RBP eCLIP24.84■■□□□ 1.57
SUSD1-206ENST00000475283 ARAP1Q96P48 1450 aa24.83■■□□□ 1.57
SUSD1-206ENST00000475283 CLASP1Q7Z460 1538 aa24.81■■□□□ 1.56
SUSD1-206ENST00000475283 PBRM1Q86U86 1689 aa24.78■■□□□ 1.56
SUSD1-206ENST00000475283 ABCA5Q8WWZ7 1642 aa24.77■■□□□ 1.56
SUSD1-206ENST00000475283 TOP2BQ02880 1626 aa24.74■■□□□ 1.55
SUSD1-206ENST00000475283 TRHP20396 242 aaPredicted RBP24.71■■□□□ 1.55
SUSD1-206ENST00000475283 BIVM-ERCC5R4GMW8 1640 aa24.71■■□□□ 1.55
SUSD1-206ENST00000475283 GRIN2AQ12879 1464 aa24.63■■□□□ 1.53
SUSD1-206ENST00000475283 FHAD1B1AJZ9 1412 aa24.61■■□□□ 1.53
SUSD1-206ENST00000475283 ADAMTS12P58397 1594 aa24.57■■□□□ 1.52
SUSD1-206ENST00000475283 ERICH3Q5RHP9 1530 aa24.56■■□□□ 1.52
SUSD1-206ENST00000475283 NUP160Q12769 1436 aa24.55■■□□□ 1.52
SUSD1-206ENST00000475283 CEP170Q5SW79 1584 aa24.5■■□□□ 1.51
SUSD1-206ENST00000475283 ERCC6L2Q5T890 1561 aa24.41■■□□□ 1.5
SUSD1-206ENST00000475283 JPH4Q96JJ6 628 aa24.39■■□□□ 1.49
SUSD1-206ENST00000475283 SHROOM2Q13796 1616 aa24.39■■□□□ 1.49
SUSD1-206ENST00000475283 PRG4Q92954 1404 aaPredicted RBP24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms